RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 HOXD13P35453 343 aa26.71■■□□□ 1.87
DDX41-202ENST00000503078 FLT3P36888 993 aa26.71■■□□□ 1.87
DDX41-202ENST00000503078 JAM2P57087 298 aa26.71■■□□□ 1.87
DDX41-202ENST00000503078 SETQ01105 290 aaPredicted RBP26.71■■□□□ 1.87
DDX41-202ENST00000503078 USP17L24Q0WX57 530 aa26.71■■□□□ 1.87
DDX41-202ENST00000503078 DRP2Q13474 957 aa26.71■■□□□ 1.87
DDX41-202ENST00000503078 PLCB4Q15147 1175 aa26.71■■□□□ 1.87
DDX41-202ENST00000503078 DCAF17Q5H9S7 520 aaPredicted RBP26.71■■□□□ 1.87
DDX41-202ENST00000503078 USP17L6PQ6QN14 398 aa26.71■■□□□ 1.87
DDX41-202ENST00000503078 SLFN12Q8IYM2 578 aa26.71■■□□□ 1.87
DDX41-202ENST00000503078 GLT8D2Q9H1C3 349 aa26.71■■□□□ 1.87
DDX41-202ENST00000503078 GGA1Q9UJY5 639 aa26.71■■□□□ 1.87
DDX41-202ENST00000503078 LY75O60449 1722 aa26.71■■□□□ 1.87
DDX41-202ENST00000503078 CYP3A7-CYP3A51PA0A087WV96 503 aa26.71■■□□□ 1.87
DDX41-202ENST00000503078 TRAPPC3O43617 180 aa26.71■■□□□ 1.87
DDX41-202ENST00000503078 CYP3A7P24462 503 aa26.71■■□□□ 1.87
DDX41-202ENST00000503078 SIX2Q9NPC8 291 aa26.71■■□□□ 1.87
DDX41-202ENST00000503078 BCCIPQ9P287 314 aaKnown RBP eCLIP26.71■■□□□ 1.87
DDX41-202ENST00000503078 AKAP3O75969 853 aa26.7■■□□□ 1.87
DDX41-202ENST00000503078 NPEPPSP55786 919 aa26.7■■□□□ 1.87
DDX41-202ENST00000503078 PPP2R2AP63151 447 aa26.7■■□□□ 1.87
DDX41-202ENST00000503078 KCTD1Q719H9 257 aa26.7■■□□□ 1.87
DDX41-202ENST00000503078 CCDC91Q7Z6B0 441 aa26.7■■□□□ 1.87
DDX41-202ENST00000503078 NT5DC3Q86UY8 548 aa26.7■■□□□ 1.87
DDX41-202ENST00000503078 SFR1Q86XK3 245 aa26.7■■□□□ 1.87
DDX41-202ENST00000503078 CATSPER3Q86XQ3 398 aa26.7■■□□□ 1.87
DDX41-202ENST00000503078 SEC14L1Q92503 715 aa26.7■■□□□ 1.87
DDX41-202ENST00000503078 MBOAT7Q96N66 472 aa26.7■■□□□ 1.87
DDX41-202ENST00000503078 MXD3Q9BW11 206 aa26.7■■□□□ 1.87
DDX41-202ENST00000503078 METTL14Q9HCE5 456 aaKnown RBP26.7■■□□□ 1.87
DDX41-202ENST00000503078 DDR1Q08345 913 aa26.7■■□□□ 1.86
DDX41-202ENST00000503078 ODF2Q5BJF6 829 aa26.7■■□□□ 1.86
DDX41-202ENST00000503078 TMC3Q7Z5M5 1100 aa26.7■■□□□ 1.86
DDX41-202ENST00000503078 DAAM2Q86T65 1068 aa26.7■■□□□ 1.86
DDX41-202ENST00000503078 CNBD1Q8NA66 436 aa26.7■■□□□ 1.86
DDX41-202ENST00000503078 NCAPGQ9BPX3 1015 aa26.7■■□□□ 1.86
DDX41-202ENST00000503078 GEMIN8Q9NWZ8 242 aaKnown RBP26.7■■□□□ 1.86
DDX41-202ENST00000503078 AJAP1Q9UKB5 411 aaPredicted RBP26.7■■□□□ 1.86
DDX41-202ENST00000503078 C10orf71Q711Q0 1435 aa26.7■■□□□ 1.86
DDX41-202ENST00000503078 RFC4P35249 363 aa26.69■■□□□ 1.86
DDX41-202ENST00000503078 TCERG1LQ5VWI1 586 aa26.69■■□□□ 1.86
DDX41-202ENST00000503078 HES6Q96HZ4 224 aa26.69■■□□□ 1.86
DDX41-202ENST00000503078 REEP2Q9BRK0 252 aa26.69■■□□□ 1.86
DDX41-202ENST00000503078 ANO3Q9BYT9 981 aa26.69■■□□□ 1.86
DDX41-202ENST00000503078 DDX3XO00571 662 aaKnown RBP eCLIP26.69■■□□□ 1.86
DDX41-202ENST00000503078 TTI1O43156 1089 aa26.69■■□□□ 1.86
DDX41-202ENST00000503078 PSMC6P62333 389 aa26.69■■□□□ 1.86
DDX41-202ENST00000503078 CCDC13Q8IYE1 715 aa26.69■■□□□ 1.86
DDX41-202ENST00000503078 SYT2Q8N9I0 419 aaPredicted RBP26.69■■□□□ 1.86
DDX41-202ENST00000503078 GJD4Q96KN9 370 aaPredicted RBP26.69■■□□□ 1.86
DDX41-202ENST00000503078 DDX20Q9UHI6 824 aaKnown RBP26.69■■□□□ 1.86
DDX41-202ENST00000503078 TMOD1P28289 359 aa26.68■■□□□ 1.86
DDX41-202ENST00000503078 PABPC4Q13310 644 aaKnown RBP eCLIP26.68■■□□□ 1.86
DDX41-202ENST00000503078 RPGRQ92834 1020 aaKnown RBP26.68■■□□□ 1.86
DDX41-202ENST00000503078 FAM114A2Q9NRY5 505 aa26.68■■□□□ 1.86
DDX41-202ENST00000503078 SERPINB13Q9UIV8 391 aa26.68■■□□□ 1.86
DDX41-202ENST00000503078 NOVA2Q9UNW9 492 aaKnown RBP26.68■■□□□ 1.86
DDX41-202ENST00000503078 DNM3Q9UQ16 869 aa26.68■■□□□ 1.86
DDX41-202ENST00000503078 SLC16A3O15427 465 aaKnown RBP26.68■■□□□ 1.86
DDX41-202ENST00000503078 SMTNP53814 917 aa26.68■■□□□ 1.86
DDX41-202ENST00000503078 SPIRE1Q08AE8 756 aa26.68■■□□□ 1.86
DDX41-202ENST00000503078 ERMNQ8TAM6 284 aa26.68■■□□□ 1.86
DDX41-202ENST00000503078 U2AF1L4Q8WU68 220 aaKnown RBP26.68■■□□□ 1.86
DDX41-202ENST00000503078 SLC35C1Q96A29 364 aa26.68■■□□□ 1.86
DDX41-202ENST00000503078 TYW1Q9NV66 732 aaKnown RBP26.68■■□□□ 1.86
DDX41-202ENST00000503078 GCNT4Q9P109 453 aa26.68■■□□□ 1.86
DDX41-202ENST00000503078 NR3C1P04150 777 aa26.67■■□□□ 1.86
DDX41-202ENST00000503078 PAEPP09466 180 aa26.67■■□□□ 1.86
DDX41-202ENST00000503078 RPL13P26373 211 aaKnown RBP26.67■■□□□ 1.86
DDX41-202ENST00000503078 MOXD1Q6UVY6 613 aa26.67■■□□□ 1.86
DDX41-202ENST00000503078 CCDC121Q6ZUS5 278 aa26.67■■□□□ 1.86
DDX41-202ENST00000503078 CNOT8Q9UFF9 292 aaKnown RBP26.67■■□□□ 1.86
DDX41-202ENST00000503078 UTP11Q9Y3A2 253 aaKnown RBP26.67■■□□□ 1.86
DDX41-202ENST00000503078 MYO3BQ8WXR4 1341 aa26.67■■□□□ 1.86
DDX41-202ENST00000503078 FERP16591 822 aa26.66■■□□□ 1.86
DDX41-202ENST00000503078 BMT2Q1RMZ1 405 aa26.66■■□□□ 1.86
DDX41-202ENST00000503078 AMFRQ9UKV5 643 aa26.66■■□□□ 1.86
DDX41-202ENST00000503078 ASTN1O14525 1302 aa26.66■■□□□ 1.86
DDX41-202ENST00000503078 MEIS1O00470 390 aa26.66■■□□□ 1.86
DDX41-202ENST00000503078 RPA1P27694 616 aa26.66■■□□□ 1.86
DDX41-202ENST00000503078 DHX9Q08211 1270 aaKnown RBP26.66■■□□□ 1.86
DDX41-202ENST00000503078 ETNPPLQ8TBG4 499 aa26.66■■□□□ 1.86
DDX41-202ENST00000503078 CELF4Q9BZC1 486 aaKnown RBP26.66■■□□□ 1.86
DDX41-202ENST00000503078 ACTR5Q9H9F9 607 aaPredicted RBP26.66■■□□□ 1.86
DDX41-202ENST00000503078 TTC7AQ9ULT0 858 aaPredicted RBP26.66■■□□□ 1.86
DDX41-202ENST00000503078 SPATA31C1P0DKV0 1188 aa26.65■■□□□ 1.86
DDX41-202ENST00000503078 CASP4P49662 377 aa26.65■■□□□ 1.86
DDX41-202ENST00000503078 GALCP54803 685 aa26.65■■□□□ 1.86
DDX41-202ENST00000503078 PPARDQ03181 441 aa26.65■■□□□ 1.86
DDX41-202ENST00000503078 QRICH1Q2TAL8 776 aa26.65■■□□□ 1.86
DDX41-202ENST00000503078 GJB7Q6PEY0 223 aa26.65■■□□□ 1.86
DDX41-202ENST00000503078 DDX4Q9NQI0 724 aaKnown RBP26.65■■□□□ 1.86
DDX41-202ENST00000503078 PCDHA1Q9Y5I3 950 aa26.65■■□□□ 1.86
DDX41-202ENST00000503078 GTPBP10A4D1E9 387 aaKnown RBP26.65■■□□□ 1.86
DDX41-202ENST00000503078 F8VZ95 297 aa26.65■■□□□ 1.86
DDX41-202ENST00000503078 SHMT1P34896 483 aa26.65■■□□□ 1.86
DDX41-202ENST00000503078 POU5F1Q01860 360 aaKnown RBP26.65■■□□□ 1.86
DDX41-202ENST00000503078 QPCTQ16769 361 aa26.65■■□□□ 1.86
DDX41-202ENST00000503078 RAPGEF5Q92565 580 aa26.65■■□□□ 1.86
DDX41-202ENST00000503078 DPH5Q9H2P9 285 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms