RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 RIT2Q99578 217 aa12.73□□□□□ -0.37
USP46-204ENST00000503060 SUDS3Q9H7L9 328 aaPredicted RBP12.73□□□□□ -0.37
USP46-204ENST00000503060 MMRN2Q9H8L6 949 aa12.73□□□□□ -0.37
USP46-204ENST00000503060 CETN3O15182 167 aa12.72□□□□□ -0.37
USP46-204ENST00000503060 EPHB6O15197 1021 aa12.72□□□□□ -0.37
USP46-204ENST00000503060 ZBED4O75132 1171 aa12.72□□□□□ -0.37
USP46-204ENST00000503060 MYBP10242 640 aa12.72□□□□□ -0.37
USP46-204ENST00000503060 HOXD13P35453 343 aa12.72□□□□□ -0.37
USP46-204ENST00000503060 CYLC1P35663 651 aaPredicted RBP12.72□□□□□ -0.37
USP46-204ENST00000503060 FLT3P36888 993 aa12.72□□□□□ -0.37
USP46-204ENST00000503060 ADAM9Q13443 819 aa12.72□□□□□ -0.37
USP46-204ENST00000503060 KNOP1Q1ED39 458 aaKnown RBP12.72□□□□□ -0.37
USP46-204ENST00000503060 BMT2Q1RMZ1 405 aa12.72□□□□□ -0.37
USP46-204ENST00000503060 MUM1L1Q5H9M0 696 aa12.72□□□□□ -0.37
USP46-204ENST00000503060 ANGEL2Q5VTE6 544 aaKnown RBP12.72□□□□□ -0.37
USP46-204ENST00000503060 C1orf186Q6ZWK4 172 aa12.72□□□□□ -0.37
USP46-204ENST00000503060 NIPA1Q7RTP0 329 aa12.72□□□□□ -0.37
USP46-204ENST00000503060 APOBEC3FQ8IUX4 373 aaKnown RBP12.72□□□□□ -0.37
USP46-204ENST00000503060 TRIM59Q8IWR1 403 aa12.72□□□□□ -0.37
USP46-204ENST00000503060 SAMD3Q8N6K7 520 aa12.72□□□□□ -0.37
USP46-204ENST00000503060 NACC1Q96RE7 527 aa12.72□□□□□ -0.37
USP46-204ENST00000503060 CARD6Q9BX69 1037 aa12.72□□□□□ -0.37
USP46-204ENST00000503060 FAM207AQ9NSI2 230 aaPredicted RBP12.72□□□□□ -0.37
USP46-204ENST00000503060 TRAF3IP3Q9Y228 551 aa12.72□□□□□ -0.37
USP46-204ENST00000503060 MRFAP1Q9Y605 127 aa12.72□□□□□ -0.37
USP46-204ENST00000503060 IVNS1ABPQ9Y6Y0 642 aa12.72□□□□□ -0.37
USP46-204ENST00000503060 PRPF6O94906 941 aaKnown RBP12.72□□□□□ -0.37
USP46-204ENST00000503060 ABL1P00519 1130 aa12.72□□□□□ -0.37
USP46-204ENST00000503060 HNRNPH3P31942 346 aaKnown RBP12.72□□□□□ -0.37
USP46-204ENST00000503060 BACE1P56817 501 aa12.72□□□□□ -0.37
USP46-204ENST00000503060 HERVK_113P62684 666 aa12.72□□□□□ -0.37
USP46-204ENST00000503060 CCDC170Q8IYT3 715 aa12.72□□□□□ -0.37
USP46-204ENST00000503060 MNS1Q8NEH6 495 aa12.72□□□□□ -0.37
USP46-204ENST00000503060 NLGN2Q8NFZ4 835 aa12.72□□□□□ -0.37
USP46-204ENST00000503060 SMCR8Q8TEV9 937 aaPredicted RBP12.72□□□□□ -0.37
USP46-204ENST00000503060 NHEJ1Q9H9Q4 299 aaPredicted RBP12.72□□□□□ -0.37
USP46-204ENST00000503060 AS3MTQ9HBK9 375 aa12.72□□□□□ -0.37
USP46-204ENST00000503060 HOMER2Q9NSB8 354 aa12.72□□□□□ -0.37
USP46-204ENST00000503060 CGNQ9P2M7 1197 aaKnown RBP12.72□□□□□ -0.37
USP46-204ENST00000503060 UBIAD1Q9Y5Z9 338 aa12.72□□□□□ -0.37
USP46-204ENST00000503060 FRMPD4Q14CM0 1322 aa12.71□□□□□ -0.37
USP46-204ENST00000503060 ZBTB39O15060 712 aa12.71□□□□□ -0.37
USP46-204ENST00000503060 FAM13AO94988 1023 aa12.71□□□□□ -0.37
USP46-204ENST00000503060 FDX1P10109 184 aa12.71□□□□□ -0.37
USP46-204ENST00000503060 NR2F2P24468 414 aa12.71□□□□□ -0.37
USP46-204ENST00000503060 KRT83P78385 493 aa12.71□□□□□ -0.37
USP46-204ENST00000503060 KCNMA1Q12791 1236 aa12.71□□□□□ -0.37
USP46-204ENST00000503060 PCNX4Q63HM2 1172 aa12.71□□□□□ -0.37
USP46-204ENST00000503060 SLC35F6Q8N357 371 aa12.71□□□□□ -0.37
USP46-204ENST00000503060 NEK11Q8NG66 645 aa12.71□□□□□ -0.37
USP46-204ENST00000503060 WRNIP1Q96S55 665 aa12.71□□□□□ -0.37
USP46-204ENST00000503060 EDEM3Q9BZQ6 932 aa12.71□□□□□ -0.37
USP46-204ENST00000503060 BCAS3Q9H6U6 928 aa12.71□□□□□ -0.37
USP46-204ENST00000503060 POLD4Q9HCU8 107 aa12.71□□□□□ -0.37
USP46-204ENST00000503060 PICK1Q9NRD5 415 aa12.71□□□□□ -0.37
USP46-204ENST00000503060 OLFML3Q9NRN5 406 aa12.71□□□□□ -0.37
USP46-204ENST00000503060 KCNH7Q9NS40 1196 aa12.71□□□□□ -0.37
USP46-204ENST00000503060 WRAP73Q9P2S5 460 aaPredicted RBP12.71□□□□□ -0.37
USP46-204ENST00000503060 MYO1AQ9UBC5 1043 aa12.71□□□□□ -0.37
USP46-204ENST00000503060 PLAGL2Q9UPG8 496 aa12.71□□□□□ -0.37
USP46-204ENST00000503060 EIF3CLB5ME19 914 aaKnown RBP12.71□□□□□ -0.38
USP46-204ENST00000503060 PDXKO00764 312 aa12.71□□□□□ -0.38
USP46-204ENST00000503060 CALUO43852 315 aaPredicted RBP12.71□□□□□ -0.38
USP46-204ENST00000503060 TADA3O75528 432 aa12.71□□□□□ -0.38
USP46-204ENST00000503060 ERCC6LQ2NKX8 1250 aa12.71□□□□□ -0.38
USP46-204ENST00000503060 TKFCQ3LXA3 575 aa12.71□□□□□ -0.38
USP46-204ENST00000503060 PRAMEF18Q5VWM3 479 aa12.71□□□□□ -0.38
USP46-204ENST00000503060 CCDC155Q8N6L0 562 aa12.71□□□□□ -0.38
USP46-204ENST00000503060 ZNF280CQ8ND82 737 aa12.71□□□□□ -0.38
USP46-204ENST00000503060 NEK9Q8TD19 979 aa12.71□□□□□ -0.38
USP46-204ENST00000503060 TRPM4Q8TD43 1214 aa12.71□□□□□ -0.38
USP46-204ENST00000503060 ZKSCAN4Q969J2 545 aaPredicted RBP12.71□□□□□ -0.38
USP46-204ENST00000503060 SCYL1Q96KG9 808 aa12.71□□□□□ -0.38
USP46-204ENST00000503060 TAAR1Q96RJ0 339 aa12.71□□□□□ -0.38
USP46-204ENST00000503060 EIF3CQ99613 913 aaKnown RBP12.71□□□□□ -0.38
USP46-204ENST00000503060 HAUS4Q9H6D7 363 aa12.71□□□□□ -0.38
USP46-204ENST00000503060 PKD2L1Q9P0L9 805 aa12.71□□□□□ -0.38
USP46-204ENST00000503060 FAM184BQ9ULE4 1060 aa12.71□□□□□ -0.38
USP46-204ENST00000503060 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.71□□□□□ -0.38
USP46-204ENST00000503060 DDX39AO00148 427 aaKnown RBP12.7□□□□□ -0.38
USP46-204ENST00000503060 VWA5AO00534 786 aa12.7□□□□□ -0.38
USP46-204ENST00000503060 GCNT3O95395 438 aa12.7□□□□□ -0.38
USP46-204ENST00000503060 PTPRAP18433 802 aa12.7□□□□□ -0.38
USP46-204ENST00000503060 PSMC1P62191 440 aaKnown RBP12.7□□□□□ -0.38
USP46-204ENST00000503060 RPS6P62753 249 aaKnown RBP12.7□□□□□ -0.38
USP46-204ENST00000503060 MRPS9P82933 396 aaKnown RBP12.7□□□□□ -0.38
USP46-204ENST00000503060 BAP1Q92560 729 aa12.7□□□□□ -0.38
USP46-204ENST00000503060 ATG4CQ96DT6 458 aa12.7□□□□□ -0.38
USP46-204ENST00000503060 TRERF1Q96PN7 1200 aa12.7□□□□□ -0.38
USP46-204ENST00000503060 LXNQ9BS40 222 aa12.7□□□□□ -0.38
USP46-204ENST00000503060 AGO4Q9HCK5 861 aaKnown RBP12.7□□□□□ -0.38
USP46-204ENST00000503060 TYW1Q9NV66 732 aaKnown RBP12.7□□□□□ -0.38
USP46-204ENST00000503060 SFI1A8K8P3 1242 aa12.7□□□□□ -0.38
USP46-204ENST00000503060 DHX15O43143 795 aaKnown RBP12.7□□□□□ -0.38
USP46-204ENST00000503060 CCDC172P0C7W6 258 aa12.7□□□□□ -0.38
USP46-204ENST00000503060 PPP2R3AQ06190 1150 aa12.7□□□□□ -0.38
USP46-204ENST00000503060 PDXDC1Q6P996 788 aa12.7□□□□□ -0.38
USP46-204ENST00000503060 MIER3Q7Z3K6 550 aa12.7□□□□□ -0.38
USP46-204ENST00000503060 MYCT1Q8N699 235 aa12.7□□□□□ -0.38
USP46-204ENST00000503060 KCND2Q9NZV8 630 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms