RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 HOXA2O43364 376 aa6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 EPB41L2O43491 1005 aaKnown RBP6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 ARP10275 920 aa6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 MARK3P27448 753 aa6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 CD52P31358 61 aa6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 CIITAP33076 1130 aa6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 NUBP1P53384 320 aa6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 CRYBB1P53674 252 aaPredicted RBP6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 NAPAP54920 295 aa6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 CDC42EP1Q00587 391 aa6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 SP4Q02446 784 aa6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 DLX2Q07687 328 aaPredicted RBP6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 ITGB3BPQ13352 177 aaPredicted RBP6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 KCNC3Q14003 757 aa6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 UBE2SQ16763 222 aa6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 RTN1Q16799 776 aa6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 PFKFB3Q16875 520 aaPredicted RBP6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 TYW1BQ6NUM6 668 aa6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 ZNF746Q6NUN9 644 aaPredicted RBP6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 MIS18BP1Q6P0N0 1132 aa6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 HEATR3Q7Z4Q2 680 aa6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 MICU3Q86XE3 530 aa6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 KIAA0319LQ8IZA0 1049 aa6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 KLHL23Q8NBE8 558 aa6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 CYP2W1Q8TAV3 490 aa6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 EDAQ92838 391 aa6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 KCNB2Q92953 911 aa6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 TRAIPQ9BWF2 469 aa6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 AGXT2Q9BYV1 514 aa6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 TMX1Q9H3N1 280 aa6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 TMEM161AQ9NX61 479 aa6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 CLEC1BQ9P126 229 aa6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 TRPC6Q9Y210 931 aa6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 SUPT16HQ9Y5B9 1047 aaKnown RBP6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 PCDHB7Q9Y5E2 793 aa6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 PCDHB12Q9Y5F1 795 aa6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 KMT2EQ8IZD2 1858 aa6.95□□□□□ -1.3
LSM3P4-201ENST00000502948 TECTAO75443 2155 aa6.94□□□□□ -1.3
LSM3P4-201ENST00000502948 MUC6Q6W4X9 2439 aa6.94□□□□□ -1.3
LSM3P4-201ENST00000502948 ZBTB42B2RXF5 422 aa6.94□□□□□ -1.3
LSM3P4-201ENST00000502948 FAM86B1E9PN63 330 aa6.94□□□□□ -1.3
LSM3P4-201ENST00000502948 IPO5O00410 1097 aaKnown RBP6.94□□□□□ -1.3
LSM3P4-201ENST00000502948 FSCN2O14926 492 aa6.94□□□□□ -1.3
LSM3P4-201ENST00000502948 RPS6KA5O75582 802 aa6.94□□□□□ -1.3
LSM3P4-201ENST00000502948 C22orf31O95567 290 aa6.94□□□□□ -1.3
LSM3P4-201ENST00000502948 CCNE2O96020 404 aa6.94□□□□□ -1.3
LSM3P4-201ENST00000502948 FAM86B2P0C5J1 330 aa6.94□□□□□ -1.3
LSM3P4-201ENST00000502948 SRGAP2BP0DMP2 458 aa6.94□□□□□ -1.3
LSM3P4-201ENST00000502948 HOXB8P17481 243 aaPredicted RBP6.94□□□□□ -1.3
LSM3P4-201ENST00000502948 DNAJB1P25685 340 aa6.94□□□□□ -1.3
LSM3P4-201ENST00000502948 KLRC1P26715 233 aa6.94□□□□□ -1.3
LSM3P4-201ENST00000502948 GNA11P29992 359 aa6.94□□□□□ -1.3
LSM3P4-201ENST00000502948 ADCY7P51828 1080 aa6.94□□□□□ -1.3
LSM3P4-201ENST00000502948 EVCP57679 992 aa6.94□□□□□ -1.3
LSM3P4-201ENST00000502948 RNF135Q8IUD6 432 aa6.94□□□□□ -1.3
LSM3P4-201ENST00000502948 CMTR1Q8N1G2 835 aaKnown RBP6.94□□□□□ -1.3
LSM3P4-201ENST00000502948 LINC01465Q8N7H1 131 aa6.94□□□□□ -1.3
LSM3P4-201ENST00000502948 POF1BQ8WVV4 589 aa6.94□□□□□ -1.3
LSM3P4-201ENST00000502948 PIBF1Q8WXW3 757 aa6.94□□□□□ -1.3
LSM3P4-201ENST00000502948 SUSD6Q92537 303 aa6.94□□□□□ -1.3
LSM3P4-201ENST00000502948 FAM167AQ96KS9 214 aa6.94□□□□□ -1.3
LSM3P4-201ENST00000502948 ALG13Q9NP73 1137 aaKnown RBP6.94□□□□□ -1.3
LSM3P4-201ENST00000502948 NGRNQ9NPE2 291 aaKnown RBP6.94□□□□□ -1.3
LSM3P4-201ENST00000502948 ZNF302Q9NR11 478 aa6.94□□□□□ -1.3
LSM3P4-201ENST00000502948 TLR9Q9NR96 1032 aa6.94□□□□□ -1.3
LSM3P4-201ENST00000502948 FAM217BQ9NTX9 383 aaPredicted RBP6.94□□□□□ -1.3
LSM3P4-201ENST00000502948 LRFN2Q9ULH4 789 aa6.94□□□□□ -1.3
LSM3P4-201ENST00000502948 PCDHA10Q9Y5I2 948 aa6.94□□□□□ -1.3
LSM3P4-201ENST00000502948 PIEZO1Q92508 2521 aa6.94□□□□□ -1.3
LSM3P4-201ENST00000502948 FAM86C2PA6NEL3 165 aa6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 PRPF3O43395 683 aaKnown RBP6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 GPR32O75388 356 aa6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 FGF18O76093 207 aa6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 EOMESO95936 686 aa6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 PSAPP07602 524 aa6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 LAG3P18627 525 aa6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 RXRAP19793 462 aa6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 ATP4AP20648 1035 aa6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 TMOD1P28289 359 aa6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 SFNP31947 248 aa6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 PPM1AP35813 382 aa6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 NDUFV1P49821 464 aa6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 USP11P51784 963 aa6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 IGBP1P78318 339 aa6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 COL9A3Q14050 684 aaPredicted RBP6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 DSC3Q14574 896 aa6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 DUSP6Q16828 381 aa6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 PLA2G4DQ86XP0 818 aa6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 CCDC60Q8IWA6 550 aaPredicted RBP6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 CCDC82Q8N4S0 544 aa6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 RDM1Q8NG50 284 aa6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 BICD2Q8TD16 824 aa6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 TMEM40Q8WWA1 233 aa6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 RIT2Q99578 217 aa6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 PHF7Q9BWX1 381 aaPredicted RBP6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 RNF26Q9BY78 433 aaPredicted RBP6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 C22orf23Q9BZE7 217 aa6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 TMEM117Q9H0C3 514 aa6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 FAM49AQ9H0Q0 323 aaPredicted RBP6.93□□□□□ -1.3
LSM3P4-201ENST00000502948 IRF2BPLQ9H1B7 796 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms