RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 MAGEB2O15479 319 aa28.11■■■□□ 2.09
LSM6-202ENST00000502781 RPLP2P05387 115 aaKnown RBP28.11■■■□□ 2.09
LSM6-202ENST00000502781 CSF2RAP15509 400 aa28.11■■■□□ 2.09
LSM6-202ENST00000502781 MUTP22033 750 aa28.11■■■□□ 2.09
LSM6-202ENST00000502781 YWHABP31946 246 aaKnown RBP28.11■■■□□ 2.09
LSM6-202ENST00000502781 DDIT3P35638 169 aa28.11■■■□□ 2.09
LSM6-202ENST00000502781 THPOP40225 353 aa28.11■■■□□ 2.09
LSM6-202ENST00000502781 NASPP49321 788 aaPredicted RBP28.11■■■□□ 2.09
LSM6-202ENST00000502781 HAUS3Q68CZ6 603 aa28.11■■■□□ 2.09
LSM6-202ENST00000502781 LRRC8DQ7L1W4 858 aa28.11■■■□□ 2.09
LSM6-202ENST00000502781 SCLYQ96I15 445 aa28.11■■■□□ 2.09
LSM6-202ENST00000502781 STK24Q9Y6E0 443 aa28.11■■■□□ 2.09
LSM6-202ENST00000502781 ZBTB39O15060 712 aa28.11■■■□□ 2.09
LSM6-202ENST00000502781 GPNMBQ14956 572 aa28.11■■■□□ 2.09
LSM6-202ENST00000502781 FAM26DQ5JW98 314 aa28.11■■■□□ 2.09
LSM6-202ENST00000502781 DNAJB3Q8WWF6 145 aa28.11■■■□□ 2.09
LSM6-202ENST00000502781 CYP26B1Q9NR63 512 aa28.11■■■□□ 2.09
LSM6-202ENST00000502781 PPME1Q9Y570 386 aa28.11■■■□□ 2.09
LSM6-202ENST00000502781 IGKV6-21A0A0C4DH24 114 aa28.1■■■□□ 2.09
LSM6-202ENST00000502781 VWA3AA6NCI4 1184 aa28.1■■■□□ 2.09
LSM6-202ENST00000502781 PARNO95453 639 aaKnown RBP28.1■■■□□ 2.09
LSM6-202ENST00000502781 XRCC6P12956 609 aaKnown RBP eCLIP28.1■■■□□ 2.09
LSM6-202ENST00000502781 RFC2P35250 354 aa28.1■■■□□ 2.09
LSM6-202ENST00000502781 EPHB4P54760 987 aa28.1■■■□□ 2.09
LSM6-202ENST00000502781 PPIGQ13427 754 aaKnown RBP eCLIP28.1■■■□□ 2.09
LSM6-202ENST00000502781 SLC39A14Q15043 492 aa28.1■■■□□ 2.09
LSM6-202ENST00000502781 MTERF2Q49AM1 385 aa28.1■■■□□ 2.09
LSM6-202ENST00000502781 CHRDL2Q6WN34 429 aa28.1■■■□□ 2.09
LSM6-202ENST00000502781 KIAA0319LQ8IZA0 1049 aa28.1■■■□□ 2.09
LSM6-202ENST00000502781 MMTAG2Q9BU76 263 aaKnown RBP28.1■■■□□ 2.09
LSM6-202ENST00000502781 PP2D1A8MPX8 630 aa28.09■■■□□ 2.09
LSM6-202ENST00000502781 NPEPPSP55786 919 aa28.09■■■□□ 2.09
LSM6-202ENST00000502781 MBTPS1Q14703 1052 aa28.09■■■□□ 2.09
LSM6-202ENST00000502781 PLA2G4FQ68DD2 849 aa28.09■■■□□ 2.09
LSM6-202ENST00000502781 C16orf59Q7L2K0 433 aa28.09■■■□□ 2.09
LSM6-202ENST00000502781 OTUD6AQ7L8S5 288 aa28.09■■■□□ 2.09
LSM6-202ENST00000502781 RSPH3Q86UC2 560 aa28.09■■■□□ 2.09
LSM6-202ENST00000502781 ZNF579Q8NAF0 562 aaKnown RBP28.09■■■□□ 2.09
LSM6-202ENST00000502781 AK8Q96MA6 479 aa28.09■■■□□ 2.09
LSM6-202ENST00000502781 ZNF396Q96N95 335 aaPredicted RBP28.09■■■□□ 2.09
LSM6-202ENST00000502781 SH2D3AQ9BRG2 576 aa28.09■■■□□ 2.09
LSM6-202ENST00000502781 ANKEF1Q9NU02 776 aa28.09■■■□□ 2.09
LSM6-202ENST00000502781 RSPH10B2B2RC85 870 aa28.08■■■□□ 2.09
LSM6-202ENST00000502781 RSPH10BP0C881 870 aa28.08■■■□□ 2.09
LSM6-202ENST00000502781 MGAT3Q09327 533 aa28.08■■■□□ 2.09
LSM6-202ENST00000502781 TBC1D8BQ0IIM8 1120 aa28.08■■■□□ 2.09
LSM6-202ENST00000502781 ECM1Q16610 540 aa28.08■■■□□ 2.09
LSM6-202ENST00000502781 NME8Q8N427 588 aa28.08■■■□□ 2.09
LSM6-202ENST00000502781 FAM49AQ9H0Q0 323 aaPredicted RBP28.08■■■□□ 2.09
LSM6-202ENST00000502781 IL23AQ9NPF7 189 aa28.08■■■□□ 2.09
LSM6-202ENST00000502781 TANC1Q9C0D5 1861 aa28.07■■■□□ 2.08
LSM6-202ENST00000502781 MAFO75444 373 aaPredicted RBP28.07■■■□□ 2.08
LSM6-202ENST00000502781 CDC25AP30304 524 aa28.07■■■□□ 2.08
LSM6-202ENST00000502781 CCT6AP40227 531 aaKnown RBP28.07■■■□□ 2.08
LSM6-202ENST00000502781 CEBPZQ03701 1054 aaKnown RBP28.07■■■□□ 2.08
LSM6-202ENST00000502781 GRIN1Q05586 938 aa28.07■■■□□ 2.08
LSM6-202ENST00000502781 KRT79Q5XKE5 535 aa28.07■■■□□ 2.08
LSM6-202ENST00000502781 ATL3Q6DD88 541 aa28.07■■■□□ 2.08
LSM6-202ENST00000502781 LINC00301Q8NCQ3 95 aa28.07■■■□□ 2.08
LSM6-202ENST00000502781 SNX29Q8TEQ0 813 aa28.07■■■□□ 2.08
LSM6-202ENST00000502781 CEP170P1Q96L14 293 aa28.07■■■□□ 2.08
LSM6-202ENST00000502781 UBE2OQ9C0C9 1292 aaKnown RBP28.07■■■□□ 2.08
LSM6-202ENST00000502781 FBXO2Q9UK22 296 aaPredicted RBP28.07■■■□□ 2.08
LSM6-202ENST00000502781 RANBP2P49792 3224 aaKnown RBP28.07■■■□□ 2.08
LSM6-202ENST00000502781 NBNO60934 754 aa28.06■■■□□ 2.08
LSM6-202ENST00000502781 CHRNA1P02708 482 aa28.06■■■□□ 2.08
LSM6-202ENST00000502781 CXCL10P02778 98 aa28.06■■■□□ 2.08
LSM6-202ENST00000502781 LONP1P36776 959 aaKnown RBP28.06■■■□□ 2.08
LSM6-202ENST00000502781 EFCAB12Q6NXP0 572 aa28.06■■■□□ 2.08
LSM6-202ENST00000502781 POTEGQ6S5H5 508 aa28.06■■■□□ 2.08
LSM6-202ENST00000502781 PIGOQ8TEQ8 1089 aa28.06■■■□□ 2.08
LSM6-202ENST00000502781 NACC1Q96RE7 527 aa28.06■■■□□ 2.08
LSM6-202ENST00000502781 DHX33Q9H6R0 707 aaKnown RBP28.06■■■□□ 2.08
LSM6-202ENST00000502781 TFIP11Q9UBB9 837 aaKnown RBP28.06■■■□□ 2.08
LSM6-202ENST00000502781 SRPRBQ9Y5M8 271 aaKnown RBP28.06■■■□□ 2.08
LSM6-202ENST00000502781 PFKMP08237 780 aa28.05■■■□□ 2.08
LSM6-202ENST00000502781 CTSHP09668 335 aa28.05■■■□□ 2.08
LSM6-202ENST00000502781 MARCKSP29966 332 aaPredicted RBP28.05■■■□□ 2.08
LSM6-202ENST00000502781 ANP32AP39687 249 aaKnown RBP28.05■■■□□ 2.08
LSM6-202ENST00000502781 MRPS6P82932 125 aaKnown RBP28.05■■■□□ 2.08
LSM6-202ENST00000502781 MKRN4PQ13434 485 aaPredicted RBP28.05■■■□□ 2.08
LSM6-202ENST00000502781 HYIQ5T013 277 aa28.05■■■□□ 2.08
LSM6-202ENST00000502781 RPUSD2Q8IZ73 545 aaKnown RBP28.05■■■□□ 2.08
LSM6-202ENST00000502781 METTL13Q8N6R0 699 aa28.05■■■□□ 2.08
LSM6-202ENST00000502781 DBR1Q9UK59 544 aaKnown RBP28.05■■■□□ 2.08
LSM6-202ENST00000502781 COLQQ9Y215 455 aaPredicted RBP28.05■■■□□ 2.08
LSM6-202ENST00000502781 KDM3AQ9Y4C1 1321 aa28.04■■■□□ 2.08
LSM6-202ENST00000502781 YEATS4O95619 227 aa28.04■■■□□ 2.08
LSM6-202ENST00000502781 RARRES1P49788 294 aa28.04■■■□□ 2.08
LSM6-202ENST00000502781 CLCN3P51790 818 aa28.04■■■□□ 2.08
LSM6-202ENST00000502781 XKR9Q5GH70 373 aa28.04■■■□□ 2.08
LSM6-202ENST00000502781 LRRC71Q8N4P6 559 aa28.04■■■□□ 2.08
LSM6-202ENST00000502781 A0A087WWV3 80 aa28.03■■■□□ 2.08
LSM6-202ENST00000502781 SLC26A4O43511 780 aa28.03■■■□□ 2.08
LSM6-202ENST00000502781 ACRP10323 421 aa28.03■■■□□ 2.08
LSM6-202ENST00000502781 TMOD1P28289 359 aa28.03■■■□□ 2.08
LSM6-202ENST00000502781 RFC5P40937 340 aa28.03■■■□□ 2.08
LSM6-202ENST00000502781 TMEM240Q5SV17 173 aa28.03■■■□□ 2.08
LSM6-202ENST00000502781 IER5Q5VY09 327 aa28.03■■■□□ 2.08
LSM6-202ENST00000502781 EXOC8Q8IYI6 725 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms