RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 CLIC2O15247 247 aa18.14■□□□□ 0.49
VCAN-204ENST00000502527 TGFB1I1O43294 461 aa18.14■□□□□ 0.49
VCAN-204ENST00000502527 C21orf2O43822 256 aa18.14■□□□□ 0.49
VCAN-204ENST00000502527 PHACTR2O75167 634 aa18.14■□□□□ 0.49
VCAN-204ENST00000502527 PRKCIP41743 596 aa18.14■□□□□ 0.49
VCAN-204ENST00000502527 CASP4P49662 377 aa18.14■□□□□ 0.49
VCAN-204ENST00000502527 ZNF571Q7Z3V5 609 aaPredicted RBP18.14■□□□□ 0.49
VCAN-204ENST00000502527 OGFOD1Q8N543 542 aa18.14■□□□□ 0.49
VCAN-204ENST00000502527 ZBTB9Q96C00 473 aa18.14■□□□□ 0.49
VCAN-204ENST00000502527 NACC1Q96RE7 527 aa18.14■□□□□ 0.49
VCAN-204ENST00000502527 VCPKMTQ9H867 229 aa18.14■□□□□ 0.49
VCAN-204ENST00000502527 POLD4Q9HCU8 107 aa18.14■□□□□ 0.49
VCAN-204ENST00000502527 SMARCAL1Q9NZC9 954 aa18.14■□□□□ 0.49
VCAN-204ENST00000502527 EHD2Q9NZN4 543 aa18.14■□□□□ 0.49
VCAN-204ENST00000502527 KCND2Q9NZV8 630 aa18.14■□□□□ 0.49
VCAN-204ENST00000502527 SHTN1A0MZ66 631 aa18.13■□□□□ 0.49
VCAN-204ENST00000502527 GRID2IPA4D2P6 1211 aa18.13■□□□□ 0.49
VCAN-204ENST00000502527 SFI1A8K8P3 1242 aa18.13■□□□□ 0.49
VCAN-204ENST00000502527 SYF2O95926 243 aaKnown RBP18.13■□□□□ 0.49
VCAN-204ENST00000502527 FTCDO95954 541 aa18.13■□□□□ 0.49
VCAN-204ENST00000502527 PSMC2P35998 433 aaKnown RBP18.13■□□□□ 0.49
VCAN-204ENST00000502527 SETQ01105 290 aaPredicted RBP18.13■□□□□ 0.49
VCAN-204ENST00000502527 KCNA1Q09470 495 aa18.13■□□□□ 0.49
VCAN-204ENST00000502527 IFI16Q16666 785 aaKnown RBP18.13■□□□□ 0.49
VCAN-204ENST00000502527 C8orf74Q6P047 294 aa18.13■□□□□ 0.49
VCAN-204ENST00000502527 STXBP4Q6ZWJ1 553 aa18.13■□□□□ 0.49
VCAN-204ENST00000502527 GOLGA6L1Q8N7Z2 621 aa18.13■□□□□ 0.49
VCAN-204ENST00000502527 PACSIN1Q9BY11 444 aa18.13■□□□□ 0.49
VCAN-204ENST00000502527 RBM12Q9NTZ6 932 aaKnown RBP18.13■□□□□ 0.49
VCAN-204ENST00000502527 PCDHB13Q9Y5F0 798 aa18.13■□□□□ 0.49
VCAN-204ENST00000502527 UBE4BO95155 1302 aa18.13■□□□□ 0.49
VCAN-204ENST00000502527 ZC3H4Q9UPT8 1303 aaKnown RBP18.13■□□□□ 0.49
VCAN-204ENST00000502527 RNF40O75150 1001 aa18.13■□□□□ 0.49
VCAN-204ENST00000502527 HNRNPH2P55795 449 aaKnown RBP18.13■□□□□ 0.49
VCAN-204ENST00000502527 VPS36Q86VN1 386 aa18.13■□□□□ 0.49
VCAN-204ENST00000502527 BORCS6Q96GS4 357 aa18.13■□□□□ 0.49
VCAN-204ENST00000502527 GDAP1L1Q96MZ0 367 aa18.13■□□□□ 0.49
VCAN-204ENST00000502527 ZNF577Q9BSK1 485 aa18.13■□□□□ 0.49
VCAN-204ENST00000502527 BCAS3Q9H6U6 928 aa18.13■□□□□ 0.49
VCAN-204ENST00000502527 SIX2Q9NPC8 291 aa18.13■□□□□ 0.49
VCAN-204ENST00000502527 GCNT4Q9P109 453 aa18.13■□□□□ 0.49
VCAN-204ENST00000502527 FRMPD4Q14CM0 1322 aa18.12■□□□□ 0.49
VCAN-204ENST00000502527 FLOT1O75955 427 aa18.12■□□□□ 0.49
VCAN-204ENST00000502527 TNFRSF8P28908 595 aa18.12■□□□□ 0.49
VCAN-204ENST00000502527 NMT1P30419 496 aaKnown RBP18.12■□□□□ 0.49
VCAN-204ENST00000502527 SPDYE2Q495Y8 402 aa18.12■□□□□ 0.49
VCAN-204ENST00000502527 FAM186BQ8IYM0 893 aa18.12■□□□□ 0.49
VCAN-204ENST00000502527 MS4A14Q96JA4 679 aa18.12■□□□□ 0.49
VCAN-204ENST00000502527 MKNK1Q9BUB5 465 aa18.12■□□□□ 0.49
VCAN-204ENST00000502527 NAGPAQ9UK23 515 aa18.12■□□□□ 0.49
VCAN-204ENST00000502527 FEM1BQ9UK73 627 aa18.12■□□□□ 0.49
VCAN-204ENST00000502527 ATP8B3O60423 1300 aa18.12■□□□□ 0.49
VCAN-204ENST00000502527 TBC1D12O60347 775 aa18.11■□□□□ 0.49
VCAN-204ENST00000502527 ZNF131P52739 623 aa18.11■□□□□ 0.49
VCAN-204ENST00000502527 EPHB4P54760 987 aa18.11■□□□□ 0.49
VCAN-204ENST00000502527 JAM2P57087 298 aa18.11■□□□□ 0.49
VCAN-204ENST00000502527 UBXN2AP68543 259 aa18.11■□□□□ 0.49
VCAN-204ENST00000502527 SLC7A5Q01650 507 aa18.11■□□□□ 0.49
VCAN-204ENST00000502527 ZNF772Q68DY9 489 aaPredicted RBP18.11■□□□□ 0.49
VCAN-204ENST00000502527 EMBQ6PCB8 327 aa18.11■□□□□ 0.49
VCAN-204ENST00000502527 SLC30A10Q6XR72 485 aa18.11■□□□□ 0.49
VCAN-204ENST00000502527 HOMEZQ8IX15 550 aa18.11■□□□□ 0.49
VCAN-204ENST00000502527 GOLGA5Q8TBA6 731 aa18.11■□□□□ 0.49
VCAN-204ENST00000502527 RBM46Q8TBY0 533 aaKnown RBP18.11■□□□□ 0.49
VCAN-204ENST00000502527 GMLQ99445 158 aa18.11■□□□□ 0.49
VCAN-204ENST00000502527 FAM204AQ9H8W3 233 aa18.11■□□□□ 0.49
VCAN-204ENST00000502527 ODF2LQ9ULJ1 636 aa18.11■□□□□ 0.49
VCAN-204ENST00000502527 CNTNAP1P78357 1384 aa18.11■□□□□ 0.49
VCAN-204ENST00000502527 ZMYM2Q9UBW7 1377 aa18.11■□□□□ 0.49
VCAN-204ENST00000502527 MYH10P35580 1976 aa18.11■□□□□ 0.49
VCAN-204ENST00000502527 GOLGA6BA6NDN3 693 aa18.11■□□□□ 0.49
VCAN-204ENST00000502527 RAD17O75943 681 aa18.11■□□□□ 0.49
VCAN-204ENST00000502527 CAPN2P17655 700 aa18.11■□□□□ 0.49
VCAN-204ENST00000502527 POLD1P28340 1107 aa18.11■□□□□ 0.49
VCAN-204ENST00000502527 MUM1L1Q5H9M0 696 aa18.11■□□□□ 0.49
VCAN-204ENST00000502527 FKBP1CQ5VVH2 108 aa18.11■□□□□ 0.49
VCAN-204ENST00000502527 ALKBH5Q6P6C2 394 aaKnown RBP18.11■□□□□ 0.49
VCAN-204ENST00000502527 SND1Q7KZF4 910 aaKnown RBP eCLIP18.11■□□□□ 0.495e-7■■■■■ 28.2
VCAN-204ENST00000502527 HS2ST1Q7LGA3 356 aa18.11■□□□□ 0.49
VCAN-204ENST00000502527 ZNF720Q7Z2F6 126 aa18.11■□□□□ 0.49
VCAN-204ENST00000502527 FAM178BQ8IXR5 827 aa18.11■□□□□ 0.49
VCAN-204ENST00000502527 RTKN2Q8IZC4 609 aa18.11■□□□□ 0.49
VCAN-204ENST00000502527 TAF4BQ92750 862 aa18.11■□□□□ 0.49
VCAN-204ENST00000502527 TEKT3Q9BXF9 490 aa18.11■□□□□ 0.49
VCAN-204ENST00000502527 UNC45AQ9H3U1 944 aa18.11■□□□□ 0.49
VCAN-204ENST00000502527 CES2O00748 559 aa18.1■□□□□ 0.49
VCAN-204ENST00000502527 ZBTB39O15060 712 aa18.1■□□□□ 0.49
VCAN-204ENST00000502527 ACTN2P35609 894 aa18.1■□□□□ 0.49
VCAN-204ENST00000502527 GGCXP38435 758 aa18.1■□□□□ 0.49
VCAN-204ENST00000502527 ZSCAN26Q16670 478 aa18.1■□□□□ 0.49
VCAN-204ENST00000502527 ZC2HC1CQ53FD0 456 aaPredicted RBP18.1■□□□□ 0.49
VCAN-204ENST00000502527 LDHDQ86WU2 507 aa18.1■□□□□ 0.49
VCAN-204ENST00000502527 IFT20Q8IY31 132 aa18.1■□□□□ 0.49
VCAN-204ENST00000502527 HINFPQ9BQA5 517 aa18.1■□□□□ 0.49
VCAN-204ENST00000502527 ARP10275 920 aa18.1■□□□□ 0.49
VCAN-204ENST00000502527 FERP16591 822 aa18.1■□□□□ 0.49
VCAN-204ENST00000502527 RPS6KA1Q15418 735 aa18.1■□□□□ 0.49
VCAN-204ENST00000502527 ZYXQ15942 572 aaKnown RBP18.1■□□□□ 0.49
VCAN-204ENST00000502527 LEKR1Q6ZMV7 388 aa18.1■□□□□ 0.49
VCAN-204ENST00000502527 AFAP1L1Q8TED9 768 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms