RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 CNKSR3Q6P9H4 555 aa6.58□□□□□ -1.36
SPTA1-209ENST00000498708 EEPD1Q7L9B9 569 aa6.58□□□□□ -1.36
SPTA1-209ENST00000498708 SIRT2Q8IXJ6 389 aa6.58□□□□□ -1.36
SPTA1-209ENST00000498708 TMEM192Q8IY95 271 aa6.58□□□□□ -1.36
SPTA1-209ENST00000498708 CPXCR1Q8N123 301 aa6.58□□□□□ -1.36
SPTA1-209ENST00000498708 DCLK2Q8N568 766 aa6.58□□□□□ -1.36
SPTA1-209ENST00000498708 KCNG4Q8TDN1 519 aa6.58□□□□□ -1.36
SPTA1-209ENST00000498708 CTAGE1Q96RT6 745 aa6.58□□□□□ -1.36
SPTA1-209ENST00000498708 PUS7LQ9H0K6 701 aaKnown RBP6.58□□□□□ -1.36
SPTA1-209ENST00000498708 SH2D4AQ9H788 454 aa6.58□□□□□ -1.36
SPTA1-209ENST00000498708 NEUROD4Q9HD90 331 aa6.58□□□□□ -1.36
SPTA1-209ENST00000498708 ATP8A2Q9NTI2 1148 aa6.58□□□□□ -1.36
SPTA1-209ENST00000498708 MARK1Q9P0L2 795 aa6.58□□□□□ -1.36
SPTA1-209ENST00000498708 CLEC1BQ9P126 229 aa6.58□□□□□ -1.36
SPTA1-209ENST00000498708 PPP1R9AQ9ULJ8 1098 aa6.58□□□□□ -1.36
SPTA1-209ENST00000498708 CTDP1Q9Y5B0 961 aaPredicted RBP6.58□□□□□ -1.36
SPTA1-209ENST00000498708 FRYQ5TBA9 3013 aa6.58□□□□□ -1.36
SPTA1-209ENST00000498708 OTOGLQ3ZCN5 2332 aa6.58□□□□□ -1.36
SPTA1-209ENST00000498708 SMG1Q96Q15 3661 aaKnown RBP6.57□□□□□ -1.36
SPTA1-209ENST00000498708 ZFYVE26Q68DK2 2539 aa6.57□□□□□ -1.36
SPTA1-209ENST00000498708 ZZEF1O43149 2961 aa6.57□□□□□ -1.36
SPTA1-209ENST00000498708 ABHD14A-ACY1A0A1B0GW23 586 aa6.57□□□□□ -1.36
SPTA1-209ENST00000498708 GRM6O15303 877 aa6.57□□□□□ -1.36
SPTA1-209ENST00000498708 HMMRO75330 724 aa6.57□□□□□ -1.36
SPTA1-209ENST00000498708 PRDM1O75626 825 aa6.57□□□□□ -1.36
SPTA1-209ENST00000498708 CXCL10P02778 98 aa6.57□□□□□ -1.36
SPTA1-209ENST00000498708 COPB2P35606 906 aa6.57□□□□□ -1.36
SPTA1-209ENST00000498708 BFSP2Q13515 415 aa6.57□□□□□ -1.36
SPTA1-209ENST00000498708 TSHZ3Q63HK5 1081 aa6.57□□□□□ -1.36
SPTA1-209ENST00000498708 CTR9Q6PD62 1173 aa6.57□□□□□ -1.36
SPTA1-209ENST00000498708 C16orf86Q6ZW13 317 aa6.57□□□□□ -1.36
SPTA1-209ENST00000498708 CHSY3Q70JA7 882 aa6.57□□□□□ -1.36
SPTA1-209ENST00000498708 FBXO11Q86XK2 927 aa6.57□□□□□ -1.36
SPTA1-209ENST00000498708 FBXO16Q8IX29 292 aaPredicted RBP6.57□□□□□ -1.36
SPTA1-209ENST00000498708 RPAP2Q8IXW5 612 aaPredicted RBP6.57□□□□□ -1.36
SPTA1-209ENST00000498708 ANKRD35Q8N283 1001 aa6.57□□□□□ -1.36
SPTA1-209ENST00000498708 FAM133AQ8N9E0 248 aa6.57□□□□□ -1.36
SPTA1-209ENST00000498708 CHAMP1Q96JM3 812 aa6.57□□□□□ -1.36
SPTA1-209ENST00000498708 CCDC17Q96LX7 622 aa6.57□□□□□ -1.36
SPTA1-209ENST00000498708 SAMD11Q96NU1 681 aa6.57□□□□□ -1.36
SPTA1-209ENST00000498708 TEX13BQ9BXU2 312 aa6.57□□□□□ -1.36
SPTA1-209ENST00000498708 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.57□□□□□ -1.366e-9■■■□□ 16.4
SPTA1-209ENST00000498708 SMOC2Q9H3U7 446 aa6.57□□□□□ -1.36
SPTA1-209ENST00000498708 MKNK2Q9HBH9 465 aa6.57□□□□□ -1.36
SPTA1-209ENST00000498708 RAVER2Q9HCJ3 691 aaKnown RBP6.57□□□□□ -1.36
SPTA1-209ENST00000498708 ZNF358Q9NW07 568 aa6.57□□□□□ -1.36
SPTA1-209ENST00000498708 CLIP2Q9UDT6 1046 aa6.57□□□□□ -1.36
SPTA1-209ENST00000498708 ZNF232Q9UNY5 417 aa6.57□□□□□ -1.36
SPTA1-209ENST00000498708 USP15Q9Y4E8 981 aaPredicted RBP6.57□□□□□ -1.36
SPTA1-209ENST00000498708 USP3Q9Y6I4 520 aa6.57□□□□□ -1.36
SPTA1-209ENST00000498708 RALGAPA2Q2PPJ7 1873 aa6.56□□□□□ -1.36
SPTA1-209ENST00000498708 EFSO43281 561 aa6.56□□□□□ -1.36
SPTA1-209ENST00000498708 RAB11FIP3O75154 756 aa6.56□□□□□ -1.36
SPTA1-209ENST00000498708 LGR5O75473 907 aa6.56□□□□□ -1.36
SPTA1-209ENST00000498708 LMNAP02545 664 aaKnown RBP6.56□□□□□ -1.36
SPTA1-209ENST00000498708 SELPP16109 830 aa6.56□□□□□ -1.36
SPTA1-209ENST00000498708 ATP5JP18859 108 aa6.56□□□□□ -1.36
SPTA1-209ENST00000498708 NOS2P35228 1153 aa6.56□□□□□ -1.36
SPTA1-209ENST00000498708 NDUFV1P49821 464 aa6.56□□□□□ -1.36
SPTA1-209ENST00000498708 ATP1A2P50993 1020 aa6.56□□□□□ -1.36
SPTA1-209ENST00000498708 IKBKEQ14164 716 aa6.56□□□□□ -1.36
SPTA1-209ENST00000498708 LRRFIP1Q32MZ4 808 aaKnown RBP6.56□□□□□ -1.36
SPTA1-209ENST00000498708 IQSEC1Q6DN90 963 aa6.56□□□□□ -1.36
SPTA1-209ENST00000498708 TMED8Q6PL24 325 aaPredicted RBP6.56□□□□□ -1.36
SPTA1-209ENST00000498708 LRRC8DQ7L1W4 858 aa6.56□□□□□ -1.36
SPTA1-209ENST00000498708 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.56□□□□□ -1.36
SPTA1-209ENST00000498708 SMRP1Q8NCR6 262 aa6.56□□□□□ -1.36
SPTA1-209ENST00000498708 AFAP1L1Q8TED9 768 aa6.56□□□□□ -1.36
SPTA1-209ENST00000498708 DHX38Q92620 1227 aaKnown RBP6.56□□□□□ -1.36
SPTA1-209ENST00000498708 HAUS7Q99871 368 aa6.56□□□□□ -1.36
SPTA1-209ENST00000498708 SLF1Q9BQI6 1058 aa6.56□□□□□ -1.36
SPTA1-209ENST00000498708 MTG1Q9BT17 334 aaPredicted RBP6.56□□□□□ -1.36
SPTA1-209ENST00000498708 PHF7Q9BWX1 381 aaPredicted RBP6.56□□□□□ -1.36
SPTA1-209ENST00000498708 KANSL2Q9H9L4 492 aa6.56□□□□□ -1.36
SPTA1-209ENST00000498708 SH2B1Q9NRF2 756 aaPredicted RBP6.56□□□□□ -1.36
SPTA1-209ENST00000498708 HOMER2Q9NSB8 354 aa6.56□□□□□ -1.36
SPTA1-209ENST00000498708 MTMR7Q9Y216 660 aa6.56□□□□□ -1.36
SPTA1-209ENST00000498708 Q9Y3F1 56 aa6.56□□□□□ -1.36
SPTA1-209ENST00000498708 GCN1Q92616 2671 aaKnown RBP6.56□□□□□ -1.36
SPTA1-209ENST00000498708 WDFY3Q8IZQ1 3526 aa6.56□□□□□ -1.36
SPTA1-209ENST00000498708 MYH8P13535 1937 aa6.56□□□□□ -1.36
SPTA1-209ENST00000498708 BAZ2AQ9UIF9 1905 aaKnown RBP6.56□□□□□ -1.36
SPTA1-209ENST00000498708 SERTM1A2A2V5 107 aa6.55□□□□□ -1.36
SPTA1-209ENST00000498708 F5H6K3 240 aa6.55□□□□□ -1.36
SPTA1-209ENST00000498708 K7ELQ4 463 aaPredicted RBP6.55□□□□□ -1.36
SPTA1-209ENST00000498708 PI15O43692 258 aa6.55□□□□□ -1.36
SPTA1-209ENST00000498708 ZBED4O75132 1171 aa6.55□□□□□ -1.36
SPTA1-209ENST00000498708 NDUFB10O96000 172 aa6.55□□□□□ -1.36
SPTA1-209ENST00000498708 APPP05067 770 aa6.55□□□□□ -1.36
SPTA1-209ENST00000498708 RASA1P20936 1047 aa6.55□□□□□ -1.36
SPTA1-209ENST00000498708 ALAS2P22557 587 aa6.55□□□□□ -1.36
SPTA1-209ENST00000498708 TDO2P48775 406 aa6.55□□□□□ -1.36
SPTA1-209ENST00000498708 ATXN1P54253 815 aaKnown RBP6.55□□□□□ -1.36
SPTA1-209ENST00000498708 CHMP4BP1P59074 171 aa6.55□□□□□ -1.36
SPTA1-209ENST00000498708 SNAP25P60880 206 aa6.55□□□□□ -1.36
SPTA1-209ENST00000498708 KLRC3Q07444 240 aa6.55□□□□□ -1.36
SPTA1-209ENST00000498708 COASYQ13057 564 aa6.55□□□□□ -1.36
SPTA1-209ENST00000498708 CAMK1Q14012 370 aa6.55□□□□□ -1.36
SPTA1-209ENST00000498708 COL9A3Q14050 684 aaPredicted RBP6.55□□□□□ -1.36
SPTA1-209ENST00000498708 MBTPS1Q14703 1052 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms