RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 FUT2Q10981 343 aa13.76□□□□□ -0.21
THBS3-209ENST00000498500 PTPN21Q16825 1174 aa13.76□□□□□ -0.21
THBS3-209ENST00000498500 USP17L6PQ6QN14 398 aa13.76□□□□□ -0.21
THBS3-209ENST00000498500 FANCBQ8NB91 859 aa13.76□□□□□ -0.21
THBS3-209ENST00000498500 ZBTB10Q96DT7 871 aa13.76□□□□□ -0.21
THBS3-209ENST00000498500 CDHR1Q96JP9 859 aa13.76□□□□□ -0.21
THBS3-209ENST00000498500 LZTS2Q9BRK4 669 aa13.76□□□□□ -0.21
THBS3-209ENST00000498500 AGXT2Q9BYV1 514 aa13.76□□□□□ -0.21
THBS3-209ENST00000498500 AAASQ9NRG9 546 aa13.76□□□□□ -0.21
THBS3-209ENST00000498500 FAM217BQ9NTX9 383 aaPredicted RBP13.76□□□□□ -0.21
THBS3-209ENST00000498500 PKD2L1Q9P0L9 805 aa13.76□□□□□ -0.21
THBS3-209ENST00000498500 TRPV2Q9Y5S1 764 aa13.76□□□□□ -0.21
THBS3-209ENST00000498500 KLF18A0A0U1RQI7 1052 aa13.75□□□□□ -0.21
THBS3-209ENST00000498500 FSD2A1L4K1 749 aa13.75□□□□□ -0.21
THBS3-209ENST00000498500 SRGAP2BP0DMP2 458 aa13.75□□□□□ -0.21
THBS3-209ENST00000498500 INSRRP14616 1297 aa13.75□□□□□ -0.21
THBS3-209ENST00000498500 RCAN1P53805 252 aa13.75□□□□□ -0.21
THBS3-209ENST00000498500 UBE3AQ05086 875 aa13.75□□□□□ -0.21
THBS3-209ENST00000498500 BLOC1S2Q6QNY1 142 aa13.75□□□□□ -0.21
THBS3-209ENST00000498500 Q6ZUG5 572 aa13.75□□□□□ -0.21
THBS3-209ENST00000498500 FBXL16Q8N461 479 aa13.75□□□□□ -0.21
THBS3-209ENST00000498500 ATP8B4Q8TF62 1192 aa13.75□□□□□ -0.21
THBS3-209ENST00000498500 SUSD6Q92537 303 aa13.75□□□□□ -0.21
THBS3-209ENST00000498500 GPRASP2Q96D09 838 aa13.75□□□□□ -0.21
THBS3-209ENST00000498500 RRP36Q96EU6 259 aaKnown RBP13.75□□□□□ -0.21
THBS3-209ENST00000498500 CDCA3Q99618 268 aaPredicted RBP13.75□□□□□ -0.21
THBS3-209ENST00000498500 PCDHB7Q9Y5E2 793 aa13.75□□□□□ -0.21
THBS3-209ENST00000498500 ZFHX2Q9C0A1 2572 aaPredicted RBP13.75□□□□□ -0.21
THBS3-209ENST00000498500 CACNA1HO95180 2353 aa13.74□□□□□ -0.21
THBS3-209ENST00000498500 PTPRZ1P23471 2315 aaPredicted RBP13.74□□□□□ -0.21
THBS3-209ENST00000498500 IGSF9BQ9UPX0 1349 aa13.74□□□□□ -0.21
THBS3-209ENST00000498500 hCG_1642624A0A1W2PR95 340 aa13.74□□□□□ -0.21
THBS3-209ENST00000498500 GOLGA8AA7E2F4 631 aa13.74□□□□□ -0.21
THBS3-209ENST00000498500 GOLGA8BA8MQT2 603 aa13.74□□□□□ -0.21
THBS3-209ENST00000498500 ZBTB43O43298 467 aa13.74□□□□□ -0.21
THBS3-209ENST00000498500 PDGFBP01127 241 aaPredicted RBP13.74□□□□□ -0.21
THBS3-209ENST00000498500 KCNA2P16389 499 aa13.74□□□□□ -0.21
THBS3-209ENST00000498500 SP100P23497 879 aaPredicted RBP13.74□□□□□ -0.21
THBS3-209ENST00000498500 CDC27P30260 824 aa13.74□□□□□ -0.21
THBS3-209ENST00000498500 APOBRQ0VD83 1088 aa13.74□□□□□ -0.21
THBS3-209ENST00000498500 NFX1Q12986 1120 aaKnown RBP13.74□□□□□ -0.21
THBS3-209ENST00000498500 RTN1Q16799 776 aa13.74□□□□□ -0.21
THBS3-209ENST00000498500 DUSP6Q16828 381 aa13.74□□□□□ -0.21
THBS3-209ENST00000498500 THNSL1Q8IYQ7 743 aa13.74□□□□□ -0.21
THBS3-209ENST00000498500 VN1R2Q8NFZ6 395 aa13.74□□□□□ -0.21
THBS3-209ENST00000498500 TNPO1Q92973 898 aaKnown RBP13.74□□□□□ -0.21
THBS3-209ENST00000498500 RIPOR3Q96MK2 946 aa13.74□□□□□ -0.21
THBS3-209ENST00000498500 APOL5Q9BWW9 433 aa13.74□□□□□ -0.21
THBS3-209ENST00000498500 CELF4Q9BZC1 486 aaKnown RBP13.74□□□□□ -0.21
THBS3-209ENST00000498500 RBM28Q9NW13 759 aaKnown RBP13.74□□□□□ -0.21
THBS3-209ENST00000498500 TMEM260Q9NX78 707 aa13.74□□□□□ -0.21
THBS3-209ENST00000498500 TRPC6Q9Y210 931 aa13.74□□□□□ -0.21
THBS3-209ENST00000498500 TBKBP1A7MCY6 615 aa13.73□□□□□ -0.21
THBS3-209ENST00000498500 PIK3CDO00329 1044 aa13.73□□□□□ -0.21
THBS3-209ENST00000498500 MEIS2O14770 477 aa13.73□□□□□ -0.21
THBS3-209ENST00000498500 FGF18O76093 207 aa13.73□□□□□ -0.21
THBS3-209ENST00000498500 TECP42680 631 aa13.73□□□□□ -0.21
THBS3-209ENST00000498500 SARSP49591 514 aaKnown RBP13.73□□□□□ -0.21
THBS3-209ENST00000498500 NUBP1P53384 320 aa13.73□□□□□ -0.21
THBS3-209ENST00000498500 ERVFC1P60507 584 aa13.73□□□□□ -0.21
THBS3-209ENST00000498500 MTMR1Q13613 665 aa13.73□□□□□ -0.21
THBS3-209ENST00000498500 TMEM266Q2M3C6 531 aa13.73□□□□□ -0.21
THBS3-209ENST00000498500 PDE12Q6L8Q7 609 aaKnown RBP13.73□□□□□ -0.21
THBS3-209ENST00000498500 BRF1Q92994 677 aa13.73□□□□□ -0.21
THBS3-209ENST00000498500 AZI2Q9H6S1 392 aa13.73□□□□□ -0.21
THBS3-209ENST00000498500 RNF216Q9NWF9 866 aaPredicted RBP13.73□□□□□ -0.21
THBS3-209ENST00000498500 SEC63Q9UGP8 760 aaKnown RBP13.73□□□□□ -0.21
THBS3-209ENST00000498500 PCDHA2Q9Y5H9 948 aa13.73□□□□□ -0.21
THBS3-209ENST00000498500 MYO15AQ9UKN7 3530 aa13.73□□□□□ -0.21
THBS3-209ENST00000498500 GALR2O43603 387 aaPredicted RBP13.72□□□□□ -0.21
THBS3-209ENST00000498500 ITGB5P18084 799 aa13.72□□□□□ -0.21
THBS3-209ENST00000498500 PSMA5P28066 241 aa13.72□□□□□ -0.21
THBS3-209ENST00000498500 KRT76Q01546 638 aa13.72□□□□□ -0.21
THBS3-209ENST00000498500 TOB2Q14106 344 aaPredicted RBP13.72□□□□□ -0.21
THBS3-209ENST00000498500 PLPP4Q5VZY2 271 aa13.72□□□□□ -0.21
THBS3-209ENST00000498500 WWC2Q6AWC2 1192 aa13.72□□□□□ -0.21
THBS3-209ENST00000498500 TYW1BQ6NUM6 668 aa13.72□□□□□ -0.21
THBS3-209ENST00000498500 ANKRD54Q6NXT1 300 aa13.72□□□□□ -0.21
THBS3-209ENST00000498500 LLGL2Q6P1M3 1020 aa13.72□□□□□ -0.21
THBS3-209ENST00000498500 SYNE3Q6ZMZ3 975 aa13.72□□□□□ -0.21
THBS3-209ENST00000498500 CCDC82Q8N4S0 544 aa13.72□□□□□ -0.21
THBS3-209ENST00000498500 TRAPPC12Q8WVT3 735 aa13.72□□□□□ -0.21
THBS3-209ENST00000498500 S1PR5Q9H228 398 aa13.72□□□□□ -0.21
THBS3-209ENST00000498500 TMX1Q9H3N1 280 aa13.72□□□□□ -0.21
THBS3-209ENST00000498500 ZSWIM6Q9HCJ5 1215 aa13.72□□□□□ -0.21
THBS3-209ENST00000498500 TSHZ2Q9NRE2 1034 aa13.72□□□□□ -0.21
THBS3-209ENST00000498500 GINS2Q9Y248 185 aa13.72□□□□□ -0.21
THBS3-209ENST00000498500 DENND3A2RUS2 1198 aa13.71□□□□□ -0.21
THBS3-209ENST00000498500 PROB1E7EW31 1015 aa13.71□□□□□ -0.21
THBS3-209ENST00000498500 METAP2P50579 478 aaKnown RBP eCLIP13.71□□□□□ -0.21
THBS3-209ENST00000498500 EVCP57679 992 aa13.71□□□□□ -0.21
THBS3-209ENST00000498500 FAM102BQ5T8I3 360 aa13.71□□□□□ -0.21
THBS3-209ENST00000498500 TMEM184AQ6ZMB5 413 aa13.71□□□□□ -0.21
THBS3-209ENST00000498500 RUFY3Q7L099 469 aa13.71□□□□□ -0.21
THBS3-209ENST00000498500 ASCL5Q7RTU5 278 aa13.71□□□□□ -0.21
THBS3-209ENST00000498500 NME8Q8N427 588 aa13.71□□□□□ -0.21
THBS3-209ENST00000498500 COLGALT1Q8NBJ5 622 aa13.71□□□□□ -0.21
THBS3-209ENST00000498500 KREMEN2Q8NCW0 462 aa13.71□□□□□ -0.21
THBS3-209ENST00000498500 PCYT2Q99447 389 aa13.71□□□□□ -0.21
THBS3-209ENST00000498500 ADAM2Q99965 735 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms