RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 KIAA0319LQ8IZA0 1049 aa14.38□□□□□ -0.11
HSPG2-213ENST00000498495 APBB2Q92870 758 aa14.38□□□□□ -0.11
HSPG2-213ENST00000498495 TIFAQ96CG3 184 aa14.38□□□□□ -0.11
HSPG2-213ENST00000498495 FAM161BQ96MY7 647 aa14.38□□□□□ -0.11
HSPG2-213ENST00000498495 NIFKQ9BYG3 293 aaKnown RBP14.38□□□□□ -0.11
HSPG2-213ENST00000498495 CELF4Q9BZC1 486 aaKnown RBP14.38□□□□□ -0.11
HSPG2-213ENST00000498495 OSBPL7Q9BZF2 842 aa14.38□□□□□ -0.11
HSPG2-213ENST00000498495 SEMA6BQ9H3T3 888 aa14.38□□□□□ -0.11
HSPG2-213ENST00000498495 SEPT9Q9UHD8 586 aaPredicted RBP14.38□□□□□ -0.11
HSPG2-213ENST00000498495 TRPV2Q9Y5S1 764 aa14.38□□□□□ -0.11
HSPG2-213ENST00000498495 MYH9P35579 1960 aaKnown RBP14.38□□□□□ -0.11
HSPG2-213ENST00000498495 TANC1Q9C0D5 1861 aa14.38□□□□□ -0.11
HSPG2-213ENST00000498495 RANBP2P49792 3224 aaKnown RBP14.37□□□□□ -0.11
HSPG2-213ENST00000498495 C22orf31O95567 290 aa14.37□□□□□ -0.11
HSPG2-213ENST00000498495 GHRP10912 638 aa14.37□□□□□ -0.11
HSPG2-213ENST00000498495 TRAPPC10P48553 1259 aa14.37□□□□□ -0.11
HSPG2-213ENST00000498495 WDR5P61964 334 aaKnown RBP14.37□□□□□ -0.11
HSPG2-213ENST00000498495 ORC2Q13416 577 aaPredicted RBP14.37□□□□□ -0.11
HSPG2-213ENST00000498495 TCTN1Q2MV58 587 aa14.37□□□□□ -0.11
HSPG2-213ENST00000498495 MTERF2Q49AM1 385 aa14.37□□□□□ -0.11
HSPG2-213ENST00000498495 TTC38Q5R3I4 469 aa14.37□□□□□ -0.11
HSPG2-213ENST00000498495 EFCAB12Q6NXP0 572 aa14.37□□□□□ -0.11
HSPG2-213ENST00000498495 USP38Q8NB14 1042 aa14.37□□□□□ -0.11
HSPG2-213ENST00000498495 MTMR9Q96QG7 549 aa14.37□□□□□ -0.11
HSPG2-213ENST00000498495 ZBED2Q9BTP6 218 aa14.37□□□□□ -0.11
HSPG2-213ENST00000498495 IFIH1Q9BYX4 1025 aaKnown RBP14.37□□□□□ -0.11
HSPG2-213ENST00000498495 SUGCTQ9HAC7 445 aa14.37□□□□□ -0.11
HSPG2-213ENST00000498495 GINS2Q9Y248 185 aa14.37□□□□□ -0.11
HSPG2-213ENST00000498495 SQORQ9Y6N5 450 aa14.37□□□□□ -0.11
HSPG2-213ENST00000498495 TET1Q8NFU7 2136 aa14.36□□□□□ -0.11
HSPG2-213ENST00000498495 TMEM265A0A087WTH1 108 aa14.36□□□□□ -0.11
HSPG2-213ENST00000498495 STBD1O95210 358 aa14.36□□□□□ -0.11
HSPG2-213ENST00000498495 AMHP03971 560 aa14.36□□□□□ -0.11
HSPG2-213ENST00000498495 SPIRE1Q08AE8 756 aa14.36□□□□□ -0.11
HSPG2-213ENST00000498495 TBC1D8BQ0IIM8 1120 aa14.36□□□□□ -0.11
HSPG2-213ENST00000498495 CUL4AQ13619 759 aa14.36□□□□□ -0.11
HSPG2-213ENST00000498495 LPIN1Q14693 890 aa14.36□□□□□ -0.11
HSPG2-213ENST00000498495 FBXO47Q5MNV8 452 aa14.36□□□□□ -0.11
HSPG2-213ENST00000498495 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.36□□□□□ -0.11
HSPG2-213ENST00000498495 HERC6Q8IVU3 1022 aa14.36□□□□□ -0.11
HSPG2-213ENST00000498495 TPH2Q8IWU9 490 aa14.36□□□□□ -0.11
HSPG2-213ENST00000498495 DYDC2Q96IM9 177 aa14.36□□□□□ -0.11
HSPG2-213ENST00000498495 TMEM60Q9H2L4 133 aa14.36□□□□□ -0.11
HSPG2-213ENST00000498495 ZNF576Q9H609 170 aa14.36□□□□□ -0.11
HSPG2-213ENST00000498495 ZSWIM4Q9H7M6 989 aa14.36□□□□□ -0.11
HSPG2-213ENST00000498495 SLC28A3Q9HAS3 691 aa14.36□□□□□ -0.11
HSPG2-213ENST00000498495 MTMR10Q9NXD2 777 aa14.36□□□□□ -0.11
HSPG2-213ENST00000498495 RGL1Q9NZL6 768 aa14.36□□□□□ -0.11
HSPG2-213ENST00000498495 PCDHA11Q9Y5I1 949 aa14.36□□□□□ -0.11
HSPG2-213ENST00000498495 RBAK-RBAKDNI3L0D1 243 aa14.35□□□□□ -0.11
HSPG2-213ENST00000498495 SLITRK3O94933 977 aa14.35□□□□□ -0.11
HSPG2-213ENST00000498495 TECP42680 631 aa14.35□□□□□ -0.11
HSPG2-213ENST00000498495 DEFB103AP81534 67 aa14.35□□□□□ -0.11
HSPG2-213ENST00000498495 CTTNQ14247 550 aaKnown RBP14.35□□□□□ -0.11
HSPG2-213ENST00000498495 TARBP2Q15633 366 aaKnown RBP14.35□□□□□ -0.11
HSPG2-213ENST00000498495 TSHZ1Q6ZSZ6 1077 aa14.35□□□□□ -0.11
HSPG2-213ENST00000498495 OTUD6AQ7L8S5 288 aa14.35□□□□□ -0.11
HSPG2-213ENST00000498495 C4orf19Q8IY42 314 aa14.35□□□□□ -0.11
HSPG2-213ENST00000498495 MAP7D2Q96T17 732 aa14.35□□□□□ -0.11
HSPG2-213ENST00000498495 EIF2AK1Q9BQI3 630 aaKnown RBP14.35□□□□□ -0.11
HSPG2-213ENST00000498495 SH2D3AQ9BRG2 576 aa14.35□□□□□ -0.11
HSPG2-213ENST00000498495 NKX2-4Q9H2Z4 354 aa14.35□□□□□ -0.11
HSPG2-213ENST00000498495 TTYH1Q9H313 450 aaPredicted RBP14.35□□□□□ -0.11
HSPG2-213ENST00000498495 AKT3Q9Y243 479 aa14.35□□□□□ -0.11
HSPG2-213ENST00000498495 YBX2Q9Y2T7 364 aaKnown RBP14.35□□□□□ -0.11
HSPG2-213ENST00000498495 KDM3AQ9Y4C1 1321 aa14.35□□□□□ -0.11
HSPG2-213ENST00000498495 TMEM150BA6NC51 233 aa14.34□□□□□ -0.11
HSPG2-213ENST00000498495 TLL1O43897 1013 aa14.34□□□□□ -0.11
HSPG2-213ENST00000498495 VTNP04004 478 aa14.34□□□□□ -0.11
HSPG2-213ENST00000498495 OR52Z1P0C646 297 aa14.34□□□□□ -0.11
HSPG2-213ENST00000498495 MYOGP15173 224 aa14.34□□□□□ -0.11
HSPG2-213ENST00000498495 CD52P31358 61 aa14.34□□□□□ -0.11
HSPG2-213ENST00000498495 DNM2P50570 870 aa14.34□□□□□ -0.11
HSPG2-213ENST00000498495 TOB1P50616 345 aaPredicted RBP14.34□□□□□ -0.11
HSPG2-213ENST00000498495 CLCN3P51790 818 aa14.34□□□□□ -0.11
HSPG2-213ENST00000498495 CYP4A11Q02928 519 aa14.34□□□□□ -0.11
HSPG2-213ENST00000498495 ODR4Q5SWX8 454 aa14.34□□□□□ -0.11
HSPG2-213ENST00000498495 ANO5Q75V66 913 aa14.34□□□□□ -0.11
HSPG2-213ENST00000498495 MYOCDQ8IZQ8 938 aa14.34□□□□□ -0.11
HSPG2-213ENST00000498495 ZNF710Q8N1W2 664 aa14.34□□□□□ -0.11
HSPG2-213ENST00000498495 LRRC71Q8N4P6 559 aa14.34□□□□□ -0.11
HSPG2-213ENST00000498495 CEP170P1Q96L14 293 aa14.34□□□□□ -0.11
HSPG2-213ENST00000498495 LXNQ9BS40 222 aa14.34□□□□□ -0.11
HSPG2-213ENST00000498495 AGO3Q9H9G7 860 aaKnown RBP14.34□□□□□ -0.11
HSPG2-213ENST00000498495 CDHR5Q9HBB8 845 aa14.34□□□□□ -0.11
HSPG2-213ENST00000498495 CYP26B1Q9NR63 512 aa14.34□□□□□ -0.11
HSPG2-213ENST00000498495 K7ELQ4 463 aaPredicted RBP14.33□□□□□ -0.12
HSPG2-213ENST00000498495 ENPP3O14638 875 aa14.33□□□□□ -0.12
HSPG2-213ENST00000498495 MAFO75444 373 aaPredicted RBP14.33□□□□□ -0.12
HSPG2-213ENST00000498495 RPS6KA5O75582 802 aa14.33□□□□□ -0.12
HSPG2-213ENST00000498495 GJB5O95377 273 aa14.33□□□□□ -0.12
HSPG2-213ENST00000498495 YWHABP31946 246 aaKnown RBP14.33□□□□□ -0.12
HSPG2-213ENST00000498495 CRYBB1P53674 252 aaPredicted RBP14.33□□□□□ -0.12
HSPG2-213ENST00000498495 NLRP11P59045 1033 aaKnown RBP14.33□□□□□ -0.12
HSPG2-213ENST00000498495 CDC42EP1Q00587 391 aa14.33□□□□□ -0.12
HSPG2-213ENST00000498495 NFX1Q12986 1120 aaKnown RBP14.33□□□□□ -0.12
HSPG2-213ENST00000498495 PAK2Q13177 524 aa14.33□□□□□ -0.12
HSPG2-213ENST00000498495 NBR1Q14596 966 aa14.33□□□□□ -0.12
HSPG2-213ENST00000498495 KIZQ2M2Z5 673 aa14.33□□□□□ -0.12
HSPG2-213ENST00000498495 TMEM266Q2M3C6 531 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms