RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 CTCFLQ8NI51 663 aaPredicted RBP13.36□□□□□ -0.27
CDK9-205ENST00000498339 MRPS27Q92552 414 aaKnown RBP13.36□□□□□ -0.27
CDK9-205ENST00000498339 CASP10Q92851 521 aa13.36□□□□□ -0.27
CDK9-205ENST00000498339 PPP1R16BQ96T49 567 aa13.36□□□□□ -0.27
CDK9-205ENST00000498339 ADAM2Q99965 735 aa13.36□□□□□ -0.27
CDK9-205ENST00000498339 S1PR5Q9H228 398 aa13.36□□□□□ -0.27
CDK9-205ENST00000498339 ATP6V0A4Q9HBG4 840 aa13.36□□□□□ -0.27
CDK9-205ENST00000498339 SENP2Q9HC62 589 aa13.36□□□□□ -0.27
CDK9-205ENST00000498339 SLC9A2Q9UBY0 812 aa13.36□□□□□ -0.27
CDK9-205ENST00000498339 CDH22Q9UJ99 828 aa13.36□□□□□ -0.27
CDK9-205ENST00000498339 FAM186AA6NE01 2351 aa13.35□□□□□ -0.27
CDK9-205ENST00000498339 SPDYE3A6NKU9 549 aa13.35□□□□□ -0.27
CDK9-205ENST00000498339 C2CD4DB7Z1M9 353 aa13.35□□□□□ -0.27
CDK9-205ENST00000498339 HOXB8P17481 243 aaPredicted RBP13.35□□□□□ -0.27
CDK9-205ENST00000498339 TROAPQ12815 778 aa13.35□□□□□ -0.27
CDK9-205ENST00000498339 UBE2SQ16763 222 aa13.35□□□□□ -0.27
CDK9-205ENST00000498339 SLC24A5Q71RS6 500 aa13.35□□□□□ -0.27
CDK9-205ENST00000498339 TMC7Q7Z402 723 aa13.35□□□□□ -0.27
CDK9-205ENST00000498339 ADSSL1Q8N142 457 aa13.35□□□□□ -0.27
CDK9-205ENST00000498339 TDRD5Q8NAT2 981 aaKnown RBP13.35□□□□□ -0.27
CDK9-205ENST00000498339 SDF4Q9BRK5 362 aa13.35□□□□□ -0.27
CDK9-205ENST00000498339 SMOC2Q9H3U7 446 aa13.35□□□□□ -0.27
CDK9-205ENST00000498339 POMKQ9H5K3 350 aa13.35□□□□□ -0.27
CDK9-205ENST00000498339 ERVK-5Q9HDB9 667 aa13.35□□□□□ -0.27
CDK9-205ENST00000498339 KDM3AQ9Y4C1 1321 aa13.35□□□□□ -0.27
CDK9-205ENST00000498339 SMIM35A0A1B0GVV1 85 aa13.34□□□□□ -0.27
CDK9-205ENST00000498339 HIDE1A8MVS5 230 aa13.34□□□□□ -0.27
CDK9-205ENST00000498339 PDE4AP27815 886 aa13.34□□□□□ -0.27
CDK9-205ENST00000498339 KIF5BP33176 963 aa13.34□□□□□ -0.27
CDK9-205ENST00000498339 STAT5BP51692 787 aa13.34□□□□□ -0.27
CDK9-205ENST00000498339 KRT17Q04695 432 aa13.34□□□□□ -0.27
CDK9-205ENST00000498339 ASTLQ6HA08 431 aaPredicted RBP13.34□□□□□ -0.27
CDK9-205ENST00000498339 MTHFD1LQ6UB35 978 aa13.34□□□□□ -0.27
CDK9-205ENST00000498339 TMEM184AQ6ZMB5 413 aa13.34□□□□□ -0.27
CDK9-205ENST00000498339 ABI1Q8IZP0 508 aa13.34□□□□□ -0.27
CDK9-205ENST00000498339 NME8Q8N427 588 aa13.34□□□□□ -0.27
CDK9-205ENST00000498339 FLCNQ8NFG4 579 aa13.34□□□□□ -0.27
CDK9-205ENST00000498339 NECTIN4Q96NY8 510 aa13.34□□□□□ -0.27
CDK9-205ENST00000498339 PCYT2Q99447 389 aa13.34□□□□□ -0.27
CDK9-205ENST00000498339 MYL10Q9BUA6 226 aa13.34□□□□□ -0.27
CDK9-205ENST00000498339 SPZ1Q9BXG8 430 aa13.34□□□□□ -0.27
CDK9-205ENST00000498339 PSTPIP2Q9H939 334 aa13.34□□□□□ -0.27
CDK9-205ENST00000498339 NGRNQ9NPE2 291 aaKnown RBP13.34□□□□□ -0.27
CDK9-205ENST00000498339 RGS18Q9NS28 235 aa13.34□□□□□ -0.27
CDK9-205ENST00000498339 LZTS1Q9Y250 596 aa13.34□□□□□ -0.27
CDK9-205ENST00000498339 NOC2LQ9Y3T9 749 aaKnown RBP13.34□□□□□ -0.27
CDK9-205ENST00000498339 DENND4AQ7Z401 1863 aa13.33□□□□□ -0.27
CDK9-205ENST00000498339 BACH1O14867 736 aa13.33□□□□□ -0.28
CDK9-205ENST00000498339 GPR182O15218 404 aa13.33□□□□□ -0.28
CDK9-205ENST00000498339 ASGR2P07307 311 aa13.33□□□□□ -0.28
CDK9-205ENST00000498339 KLRC1P26715 233 aa13.33□□□□□ -0.28
CDK9-205ENST00000498339 PPM1AP35813 382 aa13.33□□□□□ -0.28
CDK9-205ENST00000498339 PBX3P40426 434 aa13.33□□□□□ -0.28
CDK9-205ENST00000498339 ACTR2P61160 394 aa13.33□□□□□ -0.28
CDK9-205ENST00000498339 SMC1AQ14683 1233 aaKnown RBP13.33□□□□□ -0.28
CDK9-205ENST00000498339 PLEKHM2Q8IWE5 1019 aa13.33□□□□□ -0.28
CDK9-205ENST00000498339 TMEM87AQ8NBN3 555 aa13.33□□□□□ -0.28
CDK9-205ENST00000498339 NCOA7Q8NI08 942 aa13.33□□□□□ -0.28
CDK9-205ENST00000498339 RASGRP4Q8TDF6 673 aa13.33□□□□□ -0.28
CDK9-205ENST00000498339 ZNF558Q96NG5 402 aa13.33□□□□□ -0.28
CDK9-205ENST00000498339 CWH43Q9H720 699 aa13.33□□□□□ -0.28
CDK9-205ENST00000498339 JADE2Q9NQC1 790 aa13.33□□□□□ -0.28
CDK9-205ENST00000498339 DBR1Q9UK59 544 aaKnown RBP13.33□□□□□ -0.28
CDK9-205ENST00000498339 ST3GAL5Q9UNP4 418 aa13.33□□□□□ -0.28
CDK9-205ENST00000498339 HCFC2Q9Y5Z7 792 aa13.33□□□□□ -0.28
CDK9-205ENST00000498339 UBIAD1Q9Y5Z9 338 aa13.33□□□□□ -0.28
CDK9-205ENST00000498339 U3KPZ7 1027 aaPredicted RBP13.33□□□□□ -0.28
CDK9-205ENST00000498339 SPDYE4A6NLX3 237 aa13.32□□□□□ -0.28
CDK9-205ENST00000498339 C9IYK1 514 aa13.32□□□□□ -0.28
CDK9-205ENST00000498339 WEE2P0C1S8 567 aa13.32□□□□□ -0.28
CDK9-205ENST00000498339 MTHFRP42898 656 aa13.32□□□□□ -0.28
CDK9-205ENST00000498339 PLCB3Q01970 1234 aa13.32□□□□□ -0.28
CDK9-205ENST00000498339 ITIH3Q06033 890 aa13.32□□□□□ -0.28
CDK9-205ENST00000498339 KCNC3Q14003 757 aa13.32□□□□□ -0.28
CDK9-205ENST00000498339 RARS2Q5T160 578 aaKnown RBP13.32□□□□□ -0.28
CDK9-205ENST00000498339 KCNT2Q6UVM3 1135 aa13.32□□□□□ -0.28
CDK9-205ENST00000498339 PLPPR4Q7Z2D5 763 aa13.32□□□□□ -0.28
CDK9-205ENST00000498339 CHD1LQ86WJ1 897 aa13.32□□□□□ -0.28
CDK9-205ENST00000498339 ZNF654Q8IZM8 581 aa13.32□□□□□ -0.28
CDK9-205ENST00000498339 LRRC43Q8N309 656 aa13.32□□□□□ -0.28
CDK9-205ENST00000498339 RNF169Q8NCN4 708 aa13.32□□□□□ -0.28
CDK9-205ENST00000498339 TMEM40Q8WWA1 233 aa13.32□□□□□ -0.28
CDK9-205ENST00000498339 OSMRQ99650 979 aa13.32□□□□□ -0.28
CDK9-205ENST00000498339 ADAM7Q9H2U9 754 aa13.32□□□□□ -0.28
CDK9-205ENST00000498339 TMEM161AQ9NX61 479 aa13.32□□□□□ -0.28
CDK9-205ENST00000498339 PCDHA6Q9UN73 950 aa13.32□□□□□ -0.28
CDK9-205ENST00000498339 PCDHA8Q9Y5H6 950 aa13.32□□□□□ -0.28
CDK9-205ENST00000498339 WDR81Q562E7 1941 aa13.31□□□□□ -0.28
CDK9-205ENST00000498339 RIF1Q5UIP0 2472 aaKnown RBP13.31□□□□□ -0.28
CDK9-205ENST00000498339 DDX39AO00148 427 aaKnown RBP13.31□□□□□ -0.28
CDK9-205ENST00000498339 MAFGO15525 162 aa13.31□□□□□ -0.28
CDK9-205ENST00000498339 HOXA2O43364 376 aa13.31□□□□□ -0.28
CDK9-205ENST00000498339 DDAH1O94760 285 aa13.31□□□□□ -0.28
CDK9-205ENST00000498339 PLEKHA8P1O95397 391 aa13.31□□□□□ -0.28
CDK9-205ENST00000498339 CYP21A2P08686 494 aa13.31□□□□□ -0.28
CDK9-205ENST00000498339 BMS1Q14692 1282 aaKnown RBP13.31□□□□□ -0.28
CDK9-205ENST00000498339 KIZQ2M2Z5 673 aa13.31□□□□□ -0.28
CDK9-205ENST00000498339 NFXL1Q6ZNB6 911 aa13.31□□□□□ -0.28
CDK9-205ENST00000498339 KCNG4Q8TDN1 519 aa13.31□□□□□ -0.28
CDK9-205ENST00000498339 TMEM117Q9H0C3 514 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms