RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 IFNKQ9P0W0 207 aa9.34□□□□□ -0.91
SF3A1-210ENST00000498259 DDX41Q9UJV9 622 aaKnown RBP9.34□□□□□ -0.91
SF3A1-210ENST00000498259 MAPK8IP1Q9UQF2 711 aa9.34□□□□□ -0.91
SF3A1-210ENST00000498259 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.34□□□□□ -0.911e-8■■□□□ 12.1
SF3A1-210ENST00000498259 MAFBQ9Y5Q3 323 aaPredicted RBP9.34□□□□□ -0.91
SF3A1-210ENST00000498259 SMCHD1A6NHR9 2005 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 A0A087WWV3 80 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 KCNJ18B7U540 433 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 PDXKO00764 312 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 KIF3CO14782 793 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 TNPO2O14787 897 aaKnown RBP9.33□□□□□ -0.92
SF3A1-210ENST00000498259 N4BP3O15049 544 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 CETN3O15182 167 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 CA12O43570 354 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 FARP2O94887 1054 aaPredicted RBP9.33□□□□□ -0.92
SF3A1-210ENST00000498259 GCNT3O95395 438 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 GGPS1O95749 300 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 CCNE2O96020 404 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 GH1P01241 217 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 PLS3P13797 630 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 CD44P16070 742 aaKnown RBP9.33□□□□□ -0.92
SF3A1-210ENST00000498259 UBA1P22314 1058 aaKnown RBP9.33□□□□□ -0.92
SF3A1-210ENST00000498259 ZNF131P52739 623 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 FCGRTP55899 365 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 STX17P56962 302 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 MAP2K5Q13163 448 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 DMP1Q13316 513 aaPredicted RBP9.33□□□□□ -0.92
SF3A1-210ENST00000498259 TRIM14Q14142 442 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 MYBPC2Q14324 1141 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 KCNJ12Q14500 433 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 BMT2Q1RMZ1 405 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 DEFB115Q30KQ5 88 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 TCP11X2Q5H9J9 407 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 CDKAL1Q5VV42 579 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 TTI2Q6NXR4 508 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 C17orf99Q6UX52 265 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 CREBRFQ8IUR6 639 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 KIAA0895Q8NCT3 520 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 CCDC150Q8NCX0 1101 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 BBXQ8WY36 941 aaPredicted RBP9.33□□□□□ -0.92
SF3A1-210ENST00000498259 EMID1Q96A84 441 aaPredicted RBP9.33□□□□□ -0.92
SF3A1-210ENST00000498259 SPATA33Q96N06 139 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 TINF2Q9BSI4 451 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 SRRTQ9BXP5 876 aaKnown RBP9.33□□□□□ -0.92
SF3A1-210ENST00000498259 NIFKQ9BYG3 293 aaKnown RBP9.33□□□□□ -0.92
SF3A1-210ENST00000498259 XPO4Q9C0E2 1151 aaKnown RBP9.33□□□□□ -0.92
SF3A1-210ENST00000498259 ATP6V0A4Q9HBG4 840 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 CREBZFQ9NS37 354 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 LIMA1Q9UHB6 759 aaKnown RBP9.33□□□□□ -0.92
SF3A1-210ENST00000498259 SEPT9Q9UHD8 586 aaPredicted RBP9.33□□□□□ -0.92
SF3A1-210ENST00000498259 CPA4Q9UI42 421 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 ZNF215Q9UL58 517 aaPredicted RBP9.33□□□□□ -0.92
SF3A1-210ENST00000498259 LOXHD1Q8IVV2 1947 aa9.33□□□□□ -0.92
SF3A1-210ENST00000498259 IGKV6D-21A0A0A0MT36 114 aa9.32□□□□□ -0.92
SF3A1-210ENST00000498259 RBM47A0AV96 593 aaKnown RBP9.32□□□□□ -0.92
SF3A1-210ENST00000498259 PPFIA4O75335 1185 aa9.32□□□□□ -0.92
SF3A1-210ENST00000498259 OATP04181 439 aa9.32□□□□□ -0.92
SF3A1-210ENST00000498259 HOXD10P28358 340 aa9.32□□□□□ -0.92
SF3A1-210ENST00000498259 MTIF2P46199 727 aaKnown RBP9.32□□□□□ -0.92
SF3A1-210ENST00000498259 DNM2P50570 870 aa9.32□□□□□ -0.92
SF3A1-210ENST00000498259 POLGP54098 1239 aaPredicted RBP9.32□□□□□ -0.92
SF3A1-210ENST00000498259 PRKCEQ02156 737 aa9.32□□□□□ -0.92
SF3A1-210ENST00000498259 SP4Q02446 784 aa9.32□□□□□ -0.92
SF3A1-210ENST00000498259 RAD51AP2Q09MP3 1159 aa9.32□□□□□ -0.92
SF3A1-210ENST00000498259 TSR1Q2NL82 804 aaKnown RBP9.32□□□□□ -0.92
SF3A1-210ENST00000498259 OLFML2BQ68BL8 750 aa9.32□□□□□ -0.92
SF3A1-210ENST00000498259 SPECC1LQ69YQ0 1117 aa9.32□□□□□ -0.92
SF3A1-210ENST00000498259 ANKRD40Q6AI12 368 aa9.32□□□□□ -0.92
SF3A1-210ENST00000498259 EEPD1Q7L9B9 569 aa9.32□□□□□ -0.92
SF3A1-210ENST00000498259 FILIP1Q7Z7B0 1213 aa9.32□□□□□ -0.92
SF3A1-210ENST00000498259 USP37Q86T82 979 aa9.32□□□□□ -0.92
SF3A1-210ENST00000498259 PPFIBP1Q86W92 1011 aa9.32□□□□□ -0.92
SF3A1-210ENST00000498259 SFR1Q86XK3 245 aa9.32□□□□□ -0.92
SF3A1-210ENST00000498259 SYCP3Q8IZU3 236 aa9.32□□□□□ -0.92
SF3A1-210ENST00000498259 ZNF507Q8TCN5 953 aa9.32□□□□□ -0.92
SF3A1-210ENST00000498259 LRRC15Q8TF66 581 aa9.32□□□□□ -0.92
SF3A1-210ENST00000498259 TCP11Q8WWU5 503 aa9.32□□□□□ -0.92
SF3A1-210ENST00000498259 MAML3Q96JK9 1138 aa9.32□□□□□ -0.92
SF3A1-210ENST00000498259 NUP58Q9BVL2 599 aa9.32□□□□□ -0.92
SF3A1-210ENST00000498259 RUSC1Q9BVN2 902 aa9.32□□□□□ -0.92
SF3A1-210ENST00000498259 ST6GALNAC4Q9H4F1 302 aa9.32□□□□□ -0.92
SF3A1-210ENST00000498259 METTL14Q9HCE5 456 aaKnown RBP9.32□□□□□ -0.92
SF3A1-210ENST00000498259 CYP26B1Q9NR63 512 aa9.32□□□□□ -0.92
SF3A1-210ENST00000498259 SAMSN1Q9NSI8 373 aaKnown RBP9.32□□□□□ -0.92
SF3A1-210ENST00000498259 TYW1Q9NV66 732 aaKnown RBP9.32□□□□□ -0.92
SF3A1-210ENST00000498259 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.32□□□□□ -0.92
SF3A1-210ENST00000498259 ERAP1Q9NZ08 941 aa9.32□□□□□ -0.92
SF3A1-210ENST00000498259 NRBP1Q9UHY1 535 aa9.32□□□□□ -0.92
SF3A1-210ENST00000498259 FAM184BQ9ULE4 1060 aa9.32□□□□□ -0.92
SF3A1-210ENST00000498259 TRAF3IP3Q9Y228 551 aa9.32□□□□□ -0.92
SF3A1-210ENST00000498259 EMSYQ7Z589 1322 aa9.31□□□□□ -0.92
SF3A1-210ENST00000498259 IGSF9BQ9UPX0 1349 aa9.31□□□□□ -0.92
SF3A1-210ENST00000498259 A0A1B0GTH6 734 aa9.31□□□□□ -0.92
SF3A1-210ENST00000498259 FAM155AB1AL88 458 aaPredicted RBP9.31□□□□□ -0.92
SF3A1-210ENST00000498259 IGF2BP3O00425 579 aaKnown RBP eCLIP9.31□□□□□ -0.92
SF3A1-210ENST00000498259 PES1O00541 588 aaKnown RBP9.31□□□□□ -0.92
SF3A1-210ENST00000498259 USO1O60763 962 aaKnown RBP9.31□□□□□ -0.92
SF3A1-210ENST00000498259 COBLO75128 1261 aa9.31□□□□□ -0.92
SF3A1-210ENST00000498259 HIP1RO75146 1068 aa9.31□□□□□ -0.92
SF3A1-210ENST00000498259 XRCC5P13010 732 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms