RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 C1QTNF1Q9BXJ1 281 aa13.34□□□□□ -0.27
NUDCD3-211ENST00000497978 SLC26A6Q9BXS9 759 aa13.34□□□□□ -0.27
NUDCD3-211ENST00000497978 AGXT2Q9BYV1 514 aa13.34□□□□□ -0.27
NUDCD3-211ENST00000497978 NSUN3Q9H649 340 aaKnown RBP13.34□□□□□ -0.27
NUDCD3-211ENST00000497978 PADI3Q9ULW8 664 aa13.34□□□□□ -0.27
NUDCD3-211ENST00000497978 STK24Q9Y6E0 443 aa13.34□□□□□ -0.27
NUDCD3-211ENST00000497978 KDM3AQ9Y4C1 1321 aa13.34□□□□□ -0.27
NUDCD3-211ENST00000497978 TTC3P53804 2025 aa13.34□□□□□ -0.27
NUDCD3-211ENST00000497978 C5orf67F2Z3F1 127 aa13.33□□□□□ -0.28
NUDCD3-211ENST00000497978 EPB41L2O43491 1005 aaKnown RBP13.33□□□□□ -0.28
NUDCD3-211ENST00000497978 DGKIO75912 1065 aa13.33□□□□□ -0.28
NUDCD3-211ENST00000497978 PSAPP07602 524 aa13.33□□□□□ -0.28
NUDCD3-211ENST00000497978 IFNAR1P17181 557 aa13.33□□□□□ -0.28
NUDCD3-211ENST00000497978 PUS10Q3MIT2 529 aaKnown RBP13.33□□□□□ -0.28
NUDCD3-211ENST00000497978 PRR16Q569H4 304 aa13.33□□□□□ -0.28
NUDCD3-211ENST00000497978 RUFY3Q7L099 469 aa13.33□□□□□ -0.28
NUDCD3-211ENST00000497978 NPAS4Q8IUM7 802 aa13.33□□□□□ -0.28
NUDCD3-211ENST00000497978 TRIM22Q8IYM9 498 aa13.33□□□□□ -0.28
NUDCD3-211ENST00000497978 CLP1Q92989 425 aaKnown RBP13.33□□□□□ -0.28
NUDCD3-211ENST00000497978 ZNF689Q96CS4 500 aaPredicted RBP13.33□□□□□ -0.28
NUDCD3-211ENST00000497978 UIMC1Q96RL1 719 aa13.33□□□□□ -0.28
NUDCD3-211ENST00000497978 LMAN2LQ9H0V9 348 aa13.33□□□□□ -0.28
NUDCD3-211ENST00000497978 SH3GLB2Q9NR46 395 aa13.33□□□□□ -0.28
NUDCD3-211ENST00000497978 LRFN2Q9ULH4 789 aa13.33□□□□□ -0.28
NUDCD3-211ENST00000497978 GINS2Q9Y248 185 aa13.33□□□□□ -0.28
NUDCD3-211ENST00000497978 SAMM50Q9Y512 469 aa13.33□□□□□ -0.28
NUDCD3-211ENST00000497978 PCDHA10Q9Y5I2 948 aa13.33□□□□□ -0.28
NUDCD3-211ENST00000497978 NCOR1O75376 2440 aa13.33□□□□□ -0.28
NUDCD3-211ENST00000497978 NCK2O43639 380 aa13.32□□□□□ -0.28
NUDCD3-211ENST00000497978 COL9A1P20849 921 aa13.32□□□□□ -0.28
NUDCD3-211ENST00000497978 PDIA3P30101 505 aaKnown RBP13.32□□□□□ -0.28
NUDCD3-211ENST00000497978 CIITAP33076 1130 aa13.32□□□□□ -0.28
NUDCD3-211ENST00000497978 EVCP57679 992 aa13.32□□□□□ -0.28
NUDCD3-211ENST00000497978 CCT2P78371 535 aaKnown RBP13.32□□□□□ -0.28
NUDCD3-211ENST00000497978 NFX1Q12986 1120 aaKnown RBP13.32□□□□□ -0.28
NUDCD3-211ENST00000497978 PDAP1Q13442 181 aaKnown RBP13.32□□□□□ -0.28
NUDCD3-211ENST00000497978 NTRK3Q16288 839 aa13.32□□□□□ -0.28
NUDCD3-211ENST00000497978 TCEAL5Q5H9L2 206 aa13.32□□□□□ -0.28
NUDCD3-211ENST00000497978 EP400NLQ6ZTU2 488 aa13.32□□□□□ -0.28
NUDCD3-211ENST00000497978 CMTR2Q8IYT2 770 aaKnown RBP13.32□□□□□ -0.28
NUDCD3-211ENST00000497978 KIAA0319LQ8IZA0 1049 aa13.32□□□□□ -0.28
NUDCD3-211ENST00000497978 PLVAPQ9BX97 442 aa13.32□□□□□ -0.28
NUDCD3-211ENST00000497978 RC3H2Q9HBD1 1191 aaKnown RBP13.32□□□□□ -0.28
NUDCD3-211ENST00000497978 CEP131Q9UPN4 1083 aa13.32□□□□□ -0.28
NUDCD3-211ENST00000497978 MAFBQ9Y5Q3 323 aaPredicted RBP13.32□□□□□ -0.28
NUDCD3-211ENST00000497978 CYP46A1Q9Y6A2 500 aa13.32□□□□□ -0.28
NUDCD3-211ENST00000497978 SPTBN5Q9NRC6 3674 aaKnown RBP13.32□□□□□ -0.28
NUDCD3-211ENST00000497978 LOXHD1Q8IVV2 1947 aa13.31□□□□□ -0.28
NUDCD3-211ENST00000497978 MYH9P35579 1960 aaKnown RBP13.31□□□□□ -0.28
NUDCD3-211ENST00000497978 CPLX1O14810 134 aa13.31□□□□□ -0.28
NUDCD3-211ENST00000497978 ADAMTS3O15072 1205 aa13.31□□□□□ -0.28
NUDCD3-211ENST00000497978 GPR182O15218 404 aa13.31□□□□□ -0.28
NUDCD3-211ENST00000497978 PPFIA3O75145 1194 aa13.31□□□□□ -0.28
NUDCD3-211ENST00000497978 RPS6KA5O75582 802 aa13.31□□□□□ -0.28
NUDCD3-211ENST00000497978 USP11P51784 963 aa13.31□□□□□ -0.28
NUDCD3-211ENST00000497978 NLRP5P59047 1200 aa13.31□□□□□ -0.28
NUDCD3-211ENST00000497978 SSRP1Q08945 709 aaKnown RBP13.31□□□□□ -0.28
NUDCD3-211ENST00000497978 TMEM266Q2M3C6 531 aa13.31□□□□□ -0.28
NUDCD3-211ENST00000497978 PTCRAQ6ISU1 281 aaPredicted RBP13.31□□□□□ -0.28
NUDCD3-211ENST00000497978 TRMT1LQ7Z2T5 733 aaKnown RBP13.31□□□□□ -0.28
NUDCD3-211ENST00000497978 RTN4RL1Q86UN2 441 aaPredicted RBP13.31□□□□□ -0.28
NUDCD3-211ENST00000497978 METTL13Q8N6R0 699 aa13.31□□□□□ -0.28
NUDCD3-211ENST00000497978 SPRYD3Q8NCJ5 442 aa13.31□□□□□ -0.28
NUDCD3-211ENST00000497978 RASGRP4Q8TDF6 673 aa13.31□□□□□ -0.28
NUDCD3-211ENST00000497978 LINC01599Q8WXQ3 324 aa13.31□□□□□ -0.28
NUDCD3-211ENST00000497978 PABPC5Q96DU9 382 aaKnown RBP13.31□□□□□ -0.28
NUDCD3-211ENST00000497978 FAM167AQ96KS9 214 aa13.31□□□□□ -0.28
NUDCD3-211ENST00000497978 C22orf23Q9BZE7 217 aa13.31□□□□□ -0.28
NUDCD3-211ENST00000497978 NCOA5Q9HCD5 579 aaKnown RBP13.31□□□□□ -0.28
NUDCD3-211ENST00000497978 ZSWIM6Q9HCJ5 1215 aa13.31□□□□□ -0.28
NUDCD3-211ENST00000497978 VPS54Q9P1Q0 977 aa13.31□□□□□ -0.28
NUDCD3-211ENST00000497978 GABBR1Q9UBS5 961 aa13.31□□□□□ -0.28
NUDCD3-211ENST00000497978 FAM50BQ9Y247 325 aa13.31□□□□□ -0.28
NUDCD3-211ENST00000497978 PCDHB7Q9Y5E2 793 aa13.31□□□□□ -0.28
NUDCD3-211ENST00000497978 DENND3A2RUS2 1198 aa13.3□□□□□ -0.28
NUDCD3-211ENST00000497978 WDR64B1ANS9 1081 aa13.3□□□□□ -0.28
NUDCD3-211ENST00000497978 GRM6O15303 877 aa13.3□□□□□ -0.28
NUDCD3-211ENST00000497978 MAGEB2O15479 319 aa13.3□□□□□ -0.28
NUDCD3-211ENST00000497978 LINC00271P0C7V0 271 aa13.3□□□□□ -0.28
NUDCD3-211ENST00000497978 ATP4AP20648 1035 aa13.3□□□□□ -0.28
NUDCD3-211ENST00000497978 SARSP49591 514 aaKnown RBP13.3□□□□□ -0.28
NUDCD3-211ENST00000497978 NAALADL2Q58DX5 795 aa13.3□□□□□ -0.28
NUDCD3-211ENST00000497978 CPLX2Q6PUV4 134 aaKnown RBP13.3□□□□□ -0.28
NUDCD3-211ENST00000497978 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.3□□□□□ -0.28
NUDCD3-211ENST00000497978 NEK9Q8TD19 979 aa13.3□□□□□ -0.28
NUDCD3-211ENST00000497978 P2RX5Q93086 422 aa13.3□□□□□ -0.28
NUDCD3-211ENST00000497978 ZNF274Q96GC6 653 aaPredicted RBP13.3□□□□□ -0.28
NUDCD3-211ENST00000497978 ERVK-5Q9HDB9 667 aa13.3□□□□□ -0.28
NUDCD3-211ENST00000497978 C1orf112Q9NSG2 853 aa13.3□□□□□ -0.28
NUDCD3-211ENST00000497978 NRBP2Q9NSY0 501 aa13.3□□□□□ -0.28
NUDCD3-211ENST00000497978 MRPL42Q9Y6G3 142 aaKnown RBP13.3□□□□□ -0.28
NUDCD3-211ENST00000497978 BRWD1Q9NSI6 2320 aa13.3□□□□□ -0.28
NUDCD3-211ENST00000497978 EVPLQ92817 2033 aa13.29□□□□□ -0.28
NUDCD3-211ENST00000497978 GRXCR2A6NFK2 248 aa13.29□□□□□ -0.28
NUDCD3-211ENST00000497978 ZBTB42B2RXF5 422 aa13.29□□□□□ -0.28
NUDCD3-211ENST00000497978 H3BQ06 376 aaPredicted RBP13.29□□□□□ -0.28
NUDCD3-211ENST00000497978 GAS7O60861 476 aa13.29□□□□□ -0.28
NUDCD3-211ENST00000497978 C22orf31O95567 290 aa13.29□□□□□ -0.28
NUDCD3-211ENST00000497978 MMP1P03956 469 aa13.29□□□□□ -0.28
NUDCD3-211ENST00000497978 NEFLP07196 543 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms