RNA–Protein interactions for RNA: ENST00000497832.1

RNF25-206, Transcript of ring finger protein 25, human

TSL 3

Gene RNF25, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF25-206	ENST00000497832	PPP4R3B	Q5MIZ7	849 aa		12.51	□□□□□ -0.41
RNF25-206	ENST00000497832	FAM102B	Q5T8I3	360 aa		12.51	□□□□□ -0.41
RNF25-206	ENST00000497832	STPG1	Q5TH74	334 aa		12.51	□□□□□ -0.41
RNF25-206	ENST00000497832	SYDE2	Q5VT97	1194 aa		12.51	□□□□□ -0.41
RNF25-206	ENST00000497832	GIMAP6	Q6P9H5	292 aa		12.51	□□□□□ -0.41
RNF25-206	ENST00000497832	KCNT2	Q6UVM3	1135 aa		12.51	□□□□□ -0.41
RNF25-206	ENST00000497832	RSPO2	Q6UXX9	243 aa	Predicted RBP	12.51	□□□□□ -0.41
RNF25-206	ENST00000497832	SSH3	Q8TE77	659 aa		12.51	□□□□□ -0.41
RNF25-206	ENST00000497832	SCNM1	Q9BWG6	230 aa		12.51	□□□□□ -0.41
RNF25-206	ENST00000497832	USP26	Q9BXU7	913 aa		12.51	□□□□□ -0.41
RNF25-206	ENST00000497832	PADI3	Q9ULW8	664 aa		12.51	□□□□□ -0.41
RNF25-206	ENST00000497832	NOP58	Q9Y2X3	529 aa	Known RBP	12.51	□□□□□ -0.41
RNF25-206	ENST00000497832	SUPT16H	Q9Y5B9	1047 aa	Known RBP	12.51	□□□□□ -0.41
RNF25-206	ENST00000497832	IRAK3	Q9Y616	596 aa		12.51	□□□□□ -0.41
RNF25-206	ENST00000497832	CDY2A	Q9Y6F7	541 aa		12.51	□□□□□ -0.41
RNF25-206	ENST00000497832	TEX15	Q9BXT5	2789 aa		12.5	□□□□□ -0.41
RNF25-206	ENST00000497832	FAM170B	A6NMN3	283 aa		12.5	□□□□□ -0.41
RNF25-206	ENST00000497832	GOLIM4	O00461	696 aa		12.5	□□□□□ -0.41
RNF25-206	ENST00000497832	SURF6	O75683	361 aa	Known RBP	12.5	□□□□□ -0.41
RNF25-206	ENST00000497832	TSPY3	P0CV98	308 aa		12.5	□□□□□ -0.41
RNF25-206	ENST00000497832	TSPY8	P0CW00	308 aa		12.5	□□□□□ -0.41
RNF25-206	ENST00000497832	NCL	P19338	710 aa	Known RBP	12.5	□□□□□ -0.41
RNF25-206	ENST00000497832	SLC16A2	P36021	539 aa		12.5	□□□□□ -0.41
RNF25-206	ENST00000497832	UBXN2B	Q14CS0	331 aa		12.5	□□□□□ -0.41
RNF25-206	ENST00000497832	CCDC6	Q16204	474 aa		12.5	□□□□□ -0.41
RNF25-206	ENST00000497832	TTBK2	Q6IQ55	1244 aa		12.5	□□□□□ -0.41
RNF25-206	ENST00000497832	SYTL5	Q8TDW5	730 aa	Predicted RBP	12.5	□□□□□ -0.41
RNF25-206	ENST00000497832	DCAF4	Q8WV16	495 aa		12.5	□□□□□ -0.41
RNF25-206	ENST00000497832	KLHL5	Q96PQ7	755 aa		12.5	□□□□□ -0.41
RNF25-206	ENST00000497832	MYADM	Q96S97	322 aa		12.5	□□□□□ -0.41
RNF25-206	ENST00000497832	HNRNPAB	Q99729	332 aa	Known RBP	12.5	□□□□□ -0.41
RNF25-206	ENST00000497832	TICRR	Q7Z2Z1	1910 aa		12.49	□□□□□ -0.41
RNF25-206	ENST00000497832	CCDC171	Q6TFL3	1326 aa		12.49	□□□□□ -0.41
RNF25-206	ENST00000497832	MINDY4B	A8MYZ0	360 aa		12.49	□□□□□ -0.41
RNF25-206	ENST00000497832	ANHX	E9PGG2	379 aa		12.49	□□□□□ -0.41
RNF25-206	ENST00000497832	CXCL14	O95715	111 aa		12.49	□□□□□ -0.41
RNF25-206	ENST00000497832	RPLP2	P05387	115 aa	Known RBP	12.49	□□□□□ -0.41
RNF25-206	ENST00000497832	GBP2	P32456	591 aa	Predicted RBP	12.49	□□□□□ -0.41
RNF25-206	ENST00000497832	MRPS6	P82932	125 aa	Known RBP	12.49	□□□□□ -0.41
RNF25-206	ENST00000497832	SP2	Q02086	613 aa		12.49	□□□□□ -0.41
RNF25-206	ENST00000497832	C19orf57	Q0VDD7	668 aa		12.49	□□□□□ -0.41
RNF25-206	ENST00000497832	DDX10	Q13206	875 aa	Known RBP	12.49	□□□□□ -0.41
RNF25-206	ENST00000497832	BMS1	Q14692	1282 aa	Known RBP	12.49	□□□□□ -0.41
RNF25-206	ENST00000497832	UBE3C	Q15386	1083 aa		12.49	□□□□□ -0.41
RNF25-206	ENST00000497832	ZBTB41	Q5SVQ8	909 aa		12.49	□□□□□ -0.41
RNF25-206	ENST00000497832	MAMSTR	Q6ZN01	415 aa		12.49	□□□□□ -0.41
RNF25-206	ENST00000497832	STAM	Q92783	540 aa		12.49	□□□□□ -0.41
RNF25-206	ENST00000497832	ZNF558	Q96NG5	402 aa		12.49	□□□□□ -0.41
RNF25-206	ENST00000497832	RMDN3	Q96TC7	470 aa		12.49	□□□□□ -0.41
RNF25-206	ENST00000497832	RHOBTB2	Q9BYZ6	727 aa		12.49	□□□□□ -0.41
RNF25-206	ENST00000497832	TMX1	Q9H3N1	280 aa		12.49	□□□□□ -0.41
RNF25-206	ENST00000497832	LTB4R2	Q9NPC1	389 aa		12.49	□□□□□ -0.41
RNF25-206	ENST00000497832	SPG21	Q9NZD8	308 aa		12.49	□□□□□ -0.41
RNF25-206	ENST00000497832	COL20A1	Q9P218	1284 aa		12.49	□□□□□ -0.41
RNF25-206	ENST00000497832	NOB1	Q9ULX3	412 aa	Known RBP	12.49	□□□□□ -0.41
RNF25-206	ENST00000497832	IGSF9B	Q9UPX0	1349 aa		12.48	□□□□□ -0.41
RNF25-206	ENST00000497832	SORBS3	O60504	671 aa		12.48	□□□□□ -0.41
RNF25-206	ENST00000497832	TOP3B	O95985	862 aa	Known RBP	12.48	□□□□□ -0.41
RNF25-206	ENST00000497832	NR3C2	P08235	984 aa		12.48	□□□□□ -0.41
RNF25-206	ENST00000497832	TGFB3	P10600	412 aa		12.48	□□□□□ -0.41
RNF25-206	ENST00000497832	UBA1	P22314	1058 aa	Known RBP	12.48	□□□□□ -0.41
RNF25-206	ENST00000497832	ZNF252P-AS1	Q0IIN9	211 aa		12.48	□□□□□ -0.41
RNF25-206	ENST00000497832	PAK2	Q13177	524 aa		12.48	□□□□□ -0.41
RNF25-206	ENST00000497832	SNW1	Q13573	536 aa	Known RBP	12.48	□□□□□ -0.41
RNF25-206	ENST00000497832	HTR4	Q13639	388 aa		12.48	□□□□□ -0.41
RNF25-206	ENST00000497832	GIT2	Q14161	759 aa		12.48	□□□□□ -0.41
RNF25-206	ENST00000497832	SIM2	Q14190	667 aa	Predicted RBP	12.48	□□□□□ -0.41
RNF25-206	ENST00000497832	MLF2	Q15773	248 aa	Predicted RBP	12.48	□□□□□ -0.41
RNF25-206	ENST00000497832	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	12.48	□□□□□ -0.41
RNF25-206	ENST00000497832	PPFIBP1	Q86W92	1011 aa		12.48	□□□□□ -0.41
RNF25-206	ENST00000497832	PROSER1	Q86XN7	944 aa		12.48	□□□□□ -0.41
RNF25-206	ENST00000497832	CMAS	Q8NFW8	434 aa	Predicted RBP	12.48	□□□□□ -0.41
RNF25-206	ENST00000497832	BBX	Q8WY36	941 aa	Predicted RBP	12.48	□□□□□ -0.41
RNF25-206	ENST00000497832	WDR6	Q9NNW5	1121 aa	Known RBP	12.48	□□□□□ -0.41
RNF25-206	ENST00000497832	ZNF462	Q96JM2	2506 aa		12.47	□□□□□ -0.41
RNF25-206	ENST00000497832	MBLAC1	A4D2B0	266 aa	Predicted RBP	12.47	□□□□□ -0.41
RNF25-206	ENST00000497832	GSG1L2	A8MUP6	293 aa		12.47	□□□□□ -0.41
RNF25-206	ENST00000497832	CAPNS1	P04632	268 aa		12.47	□□□□□ -0.41
RNF25-206	ENST00000497832	NOVA1	P51513	510 aa	Known RBP	12.47	□□□□□ -0.41
RNF25-206	ENST00000497832	TFAP4	Q01664	338 aa		12.47	□□□□□ -0.41
RNF25-206	ENST00000497832	CCDC96	Q2M329	555 aa		12.47	□□□□□ -0.41
RNF25-206	ENST00000497832	COL28A1	Q2UY09	1125 aa		12.47	□□□□□ -0.41
RNF25-206	ENST00000497832	ARHGEF16	Q5VV41	709 aa		12.47	□□□□□ -0.41
RNF25-206	ENST00000497832	C19orf48	Q6RUI8	117 aa		12.47	□□□□□ -0.41
RNF25-206	ENST00000497832	CYP26C1	Q6V0L0	522 aa		12.47	□□□□□ -0.41
RNF25-206	ENST00000497832	LRRC55	Q6ZSA7	311 aa		12.47	□□□□□ -0.41
RNF25-206	ENST00000497832	SLC39A11	Q8N1S5	342 aa		12.47	□□□□□ -0.41
RNF25-206	ENST00000497832	C12orf50	Q8NA57	414 aa	Predicted RBP	12.47	□□□□□ -0.41
RNF25-206	ENST00000497832	DNAJB3	Q8WWF6	145 aa		12.47	□□□□□ -0.41
RNF25-206	ENST00000497832	TBC1D5	Q92609	795 aa		12.47	□□□□□ -0.41
RNF25-206	ENST00000497832	NELL2	Q99435	816 aa		12.47	□□□□□ -0.41
RNF25-206	ENST00000497832	ZBP1	Q9H171	429 aa		12.47	□□□□□ -0.41
RNF25-206	ENST00000497832	MLXIP	Q9HAP2	919 aa		12.47	□□□□□ -0.41
RNF25-206	ENST00000497832	C1orf112	Q9NSG2	853 aa		12.47	□□□□□ -0.41
RNF25-206	ENST00000497832	ZNF215	Q9UL58	517 aa	Predicted RBP	12.47	□□□□□ -0.41
RNF25-206	ENST00000497832	STX8	Q9UNK0	236 aa		12.47	□□□□□ -0.41
RNF25-206	ENST00000497832	NEUROG3	Q9Y4Z2	214 aa		12.47	□□□□□ -0.41
RNF25-206	ENST00000497832	SPTA1	P02549	2419 aa		12.47	□□□□□ -0.41
RNF25-206	ENST00000497832	DOCK5	Q9H7D0	1870 aa		12.46	□□□□□ -0.41
RNF25-206	ENST00000497832	CLUH	O75153	1309 aa		12.46	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms