RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-208ENST00000497368 DCAF4Q8WV16 495 aa6.49□□□□□ -1.37
UBE3C-208ENST00000497368 YTHDC1Q96MU7 727 aaKnown RBP6.49□□□□□ -1.37
UBE3C-208ENST00000497368 FAM161BQ96MY7 647 aa6.49□□□□□ -1.37
UBE3C-208ENST00000497368 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.49□□□□□ -1.374e-9■■■■□ 25.6
UBE3C-208ENST00000497368 ZKSCAN3Q9BRR0 538 aa6.49□□□□□ -1.37
UBE3C-208ENST00000497368 NACAP1Q9BZK3 213 aa6.49□□□□□ -1.37
UBE3C-208ENST00000497368 NOP53Q9NZM5 478 aaKnown RBP6.49□□□□□ -1.37
UBE3C-208ENST00000497368 MTMR7Q9Y216 660 aa6.49□□□□□ -1.37
UBE3C-208ENST00000497368 NLRC5Q86WI3 1866 aa6.49□□□□□ -1.37
UBE3C-208ENST00000497368 WDR19Q8NEZ3 1342 aa6.49□□□□□ -1.37
UBE3C-208ENST00000497368 FAM229AH3BQW9 127 aa6.48□□□□□ -1.37
UBE3C-208ENST00000497368 RANBP6O60518 1105 aaKnown RBP6.48□□□□□ -1.37
UBE3C-208ENST00000497368 LILRB5O75023 590 aa6.48□□□□□ -1.37
UBE3C-208ENST00000497368 C6orf222P0C671 652 aaPredicted RBP6.48□□□□□ -1.37
UBE3C-208ENST00000497368 GOLGA8HP0CJ92 632 aa6.48□□□□□ -1.37
UBE3C-208ENST00000497368 TOP1P11387 765 aaKnown RBP6.48□□□□□ -1.37
UBE3C-208ENST00000497368 NID1P14543 1247 aa6.48□□□□□ -1.37
UBE3C-208ENST00000497368 PSMC6P62333 389 aa6.48□□□□□ -1.37
UBE3C-208ENST00000497368 BAATQ14032 418 aaPredicted RBP6.48□□□□□ -1.37
UBE3C-208ENST00000497368 SEC23AQ15436 765 aa6.48□□□□□ -1.37
UBE3C-208ENST00000497368 TCTN1Q2MV58 587 aa6.48□□□□□ -1.37
UBE3C-208ENST00000497368 TMEM240Q5SV17 173 aa6.48□□□□□ -1.37
UBE3C-208ENST00000497368 AKNAD1Q5T1N1 836 aa6.48□□□□□ -1.37
UBE3C-208ENST00000497368 PSAPL1Q6NUJ1 521 aa6.48□□□□□ -1.37
UBE3C-208ENST00000497368 CXCL17Q6UXB2 119 aa6.48□□□□□ -1.37
UBE3C-208ENST00000497368 HFE2Q6ZVN8 426 aa6.48□□□□□ -1.37
UBE3C-208ENST00000497368 CYB5R4Q7L1T6 521 aa6.48□□□□□ -1.37
UBE3C-208ENST00000497368 RNF180Q86T96 592 aa6.48□□□□□ -1.37
UBE3C-208ENST00000497368 TLK2Q86UE8 772 aa6.48□□□□□ -1.37
UBE3C-208ENST00000497368 FAM35AQ86V20 835 aa6.48□□□□□ -1.37
UBE3C-208ENST00000497368 ATCAYQ86WG3 371 aa6.48□□□□□ -1.37
UBE3C-208ENST00000497368 SKAP1Q86WV1 359 aa6.48□□□□□ -1.37
UBE3C-208ENST00000497368 ANKRD35Q8N283 1001 aa6.48□□□□□ -1.37
UBE3C-208ENST00000497368 ENAHQ8N8S7 591 aaPredicted RBP6.48□□□□□ -1.37
UBE3C-208ENST00000497368 GPR152Q8TDT2 470 aa6.48□□□□□ -1.37
UBE3C-208ENST00000497368 TBC1D5Q92609 795 aa6.48□□□□□ -1.37
UBE3C-208ENST00000497368 ANKS1AQ92625 1134 aa6.48□□□□□ -1.37
UBE3C-208ENST00000497368 COPS5Q92905 334 aa6.48□□□□□ -1.37
UBE3C-208ENST00000497368 TOX2Q96NM4 488 aa6.48□□□□□ -1.37
UBE3C-208ENST00000497368 ABHD16BQ9H3Z7 469 aa6.48□□□□□ -1.37
UBE3C-208ENST00000497368 JPH1Q9HDC5 661 aaPredicted RBP6.48□□□□□ -1.37
UBE3C-208ENST00000497368 C11orf16Q9NQ32 467 aa6.48□□□□□ -1.37
UBE3C-208ENST00000497368 STARD7Q9NQZ5 370 aa6.48□□□□□ -1.37
UBE3C-208ENST00000497368 SLC5A4Q9NY91 659 aa6.48□□□□□ -1.37
UBE3C-208ENST00000497368 FBXO40Q9UH90 709 aa6.48□□□□□ -1.37
UBE3C-208ENST00000497368 FAM184BQ9ULE4 1060 aa6.48□□□□□ -1.37
UBE3C-208ENST00000497368 CCPG1Q9ULG6 757 aa6.48□□□□□ -1.37
UBE3C-208ENST00000497368 CNPY2Q9Y2B0 182 aa6.48□□□□□ -1.37
UBE3C-208ENST00000497368 ELP1O95163 1332 aa6.48□□□□□ -1.37
UBE3C-208ENST00000497368 LOXHD1Q8IVV2 1947 aa6.47□□□□□ -1.37
UBE3C-208ENST00000497368 TTC28Q96AY4 2481 aa6.47□□□□□ -1.37
UBE3C-208ENST00000497368 GRXCR1A8MXD5 290 aa6.47□□□□□ -1.37
UBE3C-208ENST00000497368 B4E1Z4 1266 aa6.47□□□□□ -1.37
UBE3C-208ENST00000497368 ARVCFO00192 962 aa6.47□□□□□ -1.37
UBE3C-208ENST00000497368 B4GALT4O60513 344 aa6.47□□□□□ -1.37
UBE3C-208ENST00000497368 MMP20O60882 483 aa6.47□□□□□ -1.37
UBE3C-208ENST00000497368 CYP2C18P33260 490 aa6.47□□□□□ -1.37
UBE3C-208ENST00000497368 ANTXR2P58335 489 aa6.47□□□□□ -1.37
UBE3C-208ENST00000497368 RPS6P62753 249 aaKnown RBP6.47□□□□□ -1.37
UBE3C-208ENST00000497368 SMAD3P84022 425 aaKnown RBP6.47□□□□□ -1.37
UBE3C-208ENST00000497368 GHRHRQ02643 423 aa6.47□□□□□ -1.37
UBE3C-208ENST00000497368 PLAURQ03405 335 aa6.47□□□□□ -1.37
UBE3C-208ENST00000497368 PTH1RQ03431 593 aa6.47□□□□□ -1.37
UBE3C-208ENST00000497368 MTMR3Q13615 1198 aa6.47□□□□□ -1.37
UBE3C-208ENST00000497368 GPNMBQ14956 572 aa6.47□□□□□ -1.37
UBE3C-208ENST00000497368 CCDC96Q2M329 555 aa6.47□□□□□ -1.37
UBE3C-208ENST00000497368 TKFCQ3LXA3 575 aa6.47□□□□□ -1.37
UBE3C-208ENST00000497368 RRP12Q5JTH9 1297 aaKnown RBP6.47□□□□□ -1.37
UBE3C-208ENST00000497368 PHLDB3Q6NSJ2 640 aa6.47□□□□□ -1.37
UBE3C-208ENST00000497368 EEPD1Q7L9B9 569 aa6.47□□□□□ -1.37
UBE3C-208ENST00000497368 SPRED2Q7Z698 418 aa6.47□□□□□ -1.37
UBE3C-208ENST00000497368 ALYREFQ86V81 257 aaKnown RBP6.47□□□□□ -1.37
UBE3C-208ENST00000497368 TICAM2Q86XR7 235 aa6.47□□□□□ -1.37
UBE3C-208ENST00000497368 MYLIPQ8WY64 445 aa6.47□□□□□ -1.37
UBE3C-208ENST00000497368 MTMR8Q96EF0 704 aa6.47□□□□□ -1.37
UBE3C-208ENST00000497368 DDX11Q96FC9 970 aa6.47□□□□□ -1.37
UBE3C-208ENST00000497368 CDX2Q99626 313 aaPredicted RBP6.47□□□□□ -1.37
UBE3C-208ENST00000497368 SPOCK3Q9BQ16 436 aa6.47□□□□□ -1.37
UBE3C-208ENST00000497368 NOC4LQ9BVI4 516 aaKnown RBP6.47□□□□□ -1.37
UBE3C-208ENST00000497368 PRDM6Q9NQX0 595 aa6.47□□□□□ -1.37
UBE3C-208ENST00000497368 A0A0U1RQG5 324 aaPredicted RBP6.46□□□□□ -1.38
UBE3C-208ENST00000497368 CYTH3O43739 400 aa6.46□□□□□ -1.38
UBE3C-208ENST00000497368 TIMP1P01033 207 aa6.46□□□□□ -1.38
UBE3C-208ENST00000497368 PROCP04070 461 aa6.46□□□□□ -1.38
UBE3C-208ENST00000497368 ACRP10323 421 aa6.46□□□□□ -1.38
UBE3C-208ENST00000497368 CSF2RAP15509 400 aa6.46□□□□□ -1.38
UBE3C-208ENST00000497368 GPLD1P80108 840 aa6.46□□□□□ -1.38
UBE3C-208ENST00000497368 PURAQ00577 322 aaKnown RBP6.46□□□□□ -1.38
UBE3C-208ENST00000497368 TNFAIP2Q03169 654 aa6.46□□□□□ -1.38
UBE3C-208ENST00000497368 FPGSQ05932 587 aa6.46□□□□□ -1.38
UBE3C-208ENST00000497368 ADGRE1Q14246 886 aa6.46□□□□□ -1.38
UBE3C-208ENST00000497368 CDC37Q16543 378 aaPredicted RBP6.46□□□□□ -1.38
UBE3C-208ENST00000497368 FSCN1Q16658 493 aaKnown RBP6.46□□□□□ -1.38
UBE3C-208ENST00000497368 LRRFIP1Q32MZ4 808 aaKnown RBP6.46□□□□□ -1.38
UBE3C-208ENST00000497368 PERM1Q5SV97 790 aa6.46□□□□□ -1.38
UBE3C-208ENST00000497368 TTC22Q5TAA0 569 aa6.46□□□□□ -1.38
UBE3C-208ENST00000497368 MFSD5Q6N075 450 aa6.46□□□□□ -1.38
UBE3C-208ENST00000497368 CCDC62Q6P9F0 684 aa6.46□□□□□ -1.38
UBE3C-208ENST00000497368 CWC27Q6UX04 472 aaKnown RBP6.46□□□□□ -1.38
UBE3C-208ENST00000497368 NSMFQ6X4W1 530 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms