RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 DDX39AO00148 427 aaKnown RBP14.31□□□□□ -0.12
GARNL3-220ENST00000496711 CLIC2O15247 247 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 ZBTB7AO95365 584 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 GUCY2CP25092 1073 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 POLD1P28340 1107 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 PLA2G4AP47712 749 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 CASP4P49662 377 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 EXOC3L4Q17RC7 722 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 LONRF2Q1L5Z9 754 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 TCERG1LQ5VWI1 586 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 PCNX4Q63HM2 1172 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 MIER3Q7Z3K6 550 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 FAM178BQ8IXR5 827 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 CPXCR1Q8N123 301 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 SAMD3Q8N6K7 520 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 CAGE1Q8TC20 777 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 SLC35C1Q96A29 364 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 CAPZA3Q96KX2 299 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 FIZ1Q96SL8 496 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 MMS19Q96T76 1030 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 RAVER2Q9HCJ3 691 aaKnown RBP14.31□□□□□ -0.12
GARNL3-220ENST00000496711 JADE2Q9NQC1 790 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 KCNH7Q9NS40 1196 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 MAP3K20Q9NYL2 800 aaKnown RBP14.31□□□□□ -0.12
GARNL3-220ENST00000496711 ARID2Q68CP9 1835 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 PPP1R12BO60237 982 aaPredicted RBP14.31□□□□□ -0.12
GARNL3-220ENST00000496711 FLOT1O75955 427 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 SASH3O75995 380 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 VCAM1P19320 739 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 KLHL30Q0D2K2 578 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 DGKZQ13574 1117 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 SLC18A3Q16572 532 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 TKFCQ3LXA3 575 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 ZC2HC1CQ53FD0 456 aaPredicted RBP14.31□□□□□ -0.12
GARNL3-220ENST00000496711 DPY19L2P1Q6NXN4 242 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 MICALL2Q8IY33 904 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 FAM133AQ8N9E0 248 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 GBP3Q9H0R5 595 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 PKD2L1Q9P0L9 805 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 PNMA2Q9UL42 364 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 PPP1R9AQ9ULJ8 1098 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 SNX12Q9UMY4 172 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 UBIAD1Q9Y5Z9 338 aa14.31□□□□□ -0.12
GARNL3-220ENST00000496711 KIAA1217Q5T5P2 1943 aa14.3□□□□□ -0.12
GARNL3-220ENST00000496711 GTPBP10A4D1E9 387 aaKnown RBP14.3□□□□□ -0.12
GARNL3-220ENST00000496711 ACTN1P12814 892 aa14.3□□□□□ -0.12
GARNL3-220ENST00000496711 UCHL3P15374 230 aa14.3□□□□□ -0.12
GARNL3-220ENST00000496711 SLC9A1P19634 815 aa14.3□□□□□ -0.12
GARNL3-220ENST00000496711 PON1P27169 355 aa14.3□□□□□ -0.12
GARNL3-220ENST00000496711 PSMC2P35998 433 aaKnown RBP14.3□□□□□ -0.12
GARNL3-220ENST00000496711 USP14P54578 494 aa14.3□□□□□ -0.12
GARNL3-220ENST00000496711 RASSF7Q02833 373 aa14.3□□□□□ -0.12
GARNL3-220ENST00000496711 MTMR2Q13614 643 aa14.3□□□□□ -0.12
GARNL3-220ENST00000496711 MUM1L1Q5H9M0 696 aa14.3□□□□□ -0.12
GARNL3-220ENST00000496711 ODR4Q5SWX8 454 aa14.3□□□□□ -0.12
GARNL3-220ENST00000496711 KLHDC7AQ5VTJ3 777 aa14.3□□□□□ -0.12
GARNL3-220ENST00000496711 IQCEQ6IPM2 695 aa14.3□□□□□ -0.12
GARNL3-220ENST00000496711 GBP6Q6ZN66 633 aa14.3□□□□□ -0.12
GARNL3-220ENST00000496711 ZNF720Q7Z2F6 126 aa14.3□□□□□ -0.12
GARNL3-220ENST00000496711 FAM186BQ8IYM0 893 aa14.3□□□□□ -0.12
GARNL3-220ENST00000496711 RNF10Q8N5U6 811 aaKnown RBP14.3□□□□□ -0.12
GARNL3-220ENST00000496711 SYTL5Q8TDW5 730 aaPredicted RBP14.3□□□□□ -0.12
GARNL3-220ENST00000496711 NOX5Q96PH1 765 aa14.3□□□□□ -0.12
GARNL3-220ENST00000496711 SPAG5Q96R06 1193 aa14.3□□□□□ -0.12
GARNL3-220ENST00000496711 MKNK1Q9BUB5 465 aa14.3□□□□□ -0.12
GARNL3-220ENST00000496711 FUT8Q9BYC5 575 aa14.3□□□□□ -0.12
GARNL3-220ENST00000496711 AGO4Q9HCK5 861 aaKnown RBP14.3□□□□□ -0.12
GARNL3-220ENST00000496711 HOMER2Q9NSB8 354 aa14.3□□□□□ -0.12
GARNL3-220ENST00000496711 FBXL5Q9UKA1 691 aa14.3□□□□□ -0.12
GARNL3-220ENST00000496711 CTDP1Q9Y5B0 961 aaPredicted RBP14.3□□□□□ -0.12
GARNL3-220ENST00000496711 LOC285556D6RIA3 1793 aa14.3□□□□□ -0.12
GARNL3-220ENST00000496711 P4HBP07237 508 aaKnown RBP14.29□□□□□ -0.12
GARNL3-220ENST00000496711 PRLRP16471 622 aa14.29□□□□□ -0.12
GARNL3-220ENST00000496711 GMPSP49915 693 aaPredicted RBP14.29□□□□□ -0.12
GARNL3-220ENST00000496711 VSNL1P62760 191 aa14.29□□□□□ -0.12
GARNL3-220ENST00000496711 MTMR1Q13613 665 aa14.29□□□□□ -0.12
GARNL3-220ENST00000496711 WDR93Q6P2C0 686 aa14.29□□□□□ -0.12
GARNL3-220ENST00000496711 HS2ST1Q7LGA3 356 aa14.29□□□□□ -0.12
GARNL3-220ENST00000496711 BORCS6Q96GS4 357 aa14.29□□□□□ -0.12
GARNL3-220ENST00000496711 DRC1Q96MC2 740 aa14.29□□□□□ -0.12
GARNL3-220ENST00000496711 GCNT4Q9P109 453 aa14.29□□□□□ -0.12
GARNL3-220ENST00000496711 HACL1Q9UJ83 578 aa14.29□□□□□ -0.12
GARNL3-220ENST00000496711 PCDHB13Q9Y5F0 798 aa14.29□□□□□ -0.12
GARNL3-220ENST00000496711 ASTN2O75129 1339 aaPredicted RBP14.29□□□□□ -0.12
GARNL3-220ENST00000496711 LTBP3Q9NS15 1303 aa14.29□□□□□ -0.12
GARNL3-220ENST00000496711 ZNF185O15231 689 aa14.29□□□□□ -0.12
GARNL3-220ENST00000496711 DHX15O43143 795 aaKnown RBP14.29□□□□□ -0.12
GARNL3-220ENST00000496711 HIP1RO75146 1068 aa14.29□□□□□ -0.12
GARNL3-220ENST00000496711 MRPS9P82933 396 aaKnown RBP14.29□□□□□ -0.12
GARNL3-220ENST00000496711 ARID5AQ03989 594 aa14.29□□□□□ -0.12
GARNL3-220ENST00000496711 MAPK7Q13164 816 aa14.29□□□□□ -0.12
GARNL3-220ENST00000496711 ITGB3BPQ13352 177 aaPredicted RBP14.29□□□□□ -0.12
GARNL3-220ENST00000496711 BEND6Q5SZJ8 279 aaPredicted RBP14.29□□□□□ -0.12
GARNL3-220ENST00000496711 DCAF15Q66K64 600 aa14.29□□□□□ -0.12
GARNL3-220ENST00000496711 SAMD7Q7Z3H4 446 aa14.29□□□□□ -0.12
GARNL3-220ENST00000496711 GOLGA5Q8TBA6 731 aa14.29□□□□□ -0.12
GARNL3-220ENST00000496711 RPAP3Q9H6T3 665 aaPredicted RBP14.29□□□□□ -0.12
GARNL3-220ENST00000496711 SALL4Q9UJQ4 1053 aa14.29□□□□□ -0.12
GARNL3-220ENST00000496711 HYOU1Q9Y4L1 999 aa14.29□□□□□ -0.12
GARNL3-220ENST00000496711 WDR90Q96KV7 1748 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms