RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 KLRG2A4D1S0 409 aaPredicted RBP9.85□□□□□ -0.83
HPS4-217ENST00000496385 WTIPA6NIX2 430 aaPredicted RBP9.85□□□□□ -0.83
HPS4-217ENST00000496385 AGTP01019 485 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 CCDC166P0CW27 439 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 PDXDC2PQ6P474 469 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 RAB11FIP4Q86YS3 637 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 OR2W6PQ8NHA6 318 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 ACTRT1Q8TDG2 376 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 ASAP3Q8TDY4 903 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 PRCCQ92733 491 aaPredicted RBP9.85□□□□□ -0.83
HPS4-217ENST00000496385 PTPRN2Q92932 1015 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 AZIN2Q96A70 460 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 FAM136AQ96C01 138 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 MS4A14Q96JA4 679 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 TMEM237Q96Q45 408 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 NDNQ99608 321 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 MTA3Q9BTC8 594 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 SLITRK6Q9H5Y7 841 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 LARSQ9P2J5 1176 aaKnown RBP9.85□□□□□ -0.83
HPS4-217ENST00000496385 ARL2BPQ9Y2Y0 163 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 MROH7Q68CQ1 1323 aa9.85□□□□□ -0.83
HPS4-217ENST00000496385 BICDL2A1A5D9 508 aa9.84□□□□□ -0.83
HPS4-217ENST00000496385 BACH1O14867 736 aa9.84□□□□□ -0.83
HPS4-217ENST00000496385 FOXP2O15409 715 aa9.84□□□□□ -0.83
HPS4-217ENST00000496385 IFIT1P09914 478 aaKnown RBP9.84□□□□□ -0.83
HPS4-217ENST00000496385 MYH3P11055 1940 aa9.84□□□□□ -0.83
HPS4-217ENST00000496385 XBP1P17861 261 aa9.84□□□□□ -0.83
HPS4-217ENST00000496385 MKRN3Q13064 507 aaKnown RBP9.84□□□□□ -0.83
HPS4-217ENST00000496385 SF3B3Q15393 1217 aaKnown RBP9.84□□□□□ -0.83
HPS4-217ENST00000496385 C6orf118Q5T5N4 469 aa9.84□□□□□ -0.83
HPS4-217ENST00000496385 KRT26Q7Z3Y9 468 aa9.84□□□□□ -0.83
HPS4-217ENST00000496385 PIGOQ8TEQ8 1089 aa9.84□□□□□ -0.83
HPS4-217ENST00000496385 DYDC1Q8WWB3 177 aa9.84□□□□□ -0.83
HPS4-217ENST00000496385 APPBP2Q92624 585 aa9.84□□□□□ -0.83
HPS4-217ENST00000496385 TMEM109Q9BVC6 243 aa9.84□□□□□ -0.83
HPS4-217ENST00000496385 UBE2OQ9C0C9 1292 aaKnown RBP9.84□□□□□ -0.83
HPS4-217ENST00000496385 TXLNGQ9NUQ3 528 aa9.84□□□□□ -0.83
HPS4-217ENST00000496385 NCK2O43639 380 aa9.84□□□□□ -0.83
HPS4-217ENST00000496385 TPBGLP0DKB5 382 aa9.84□□□□□ -0.83
HPS4-217ENST00000496385 EIF4A3P38919 411 aaKnown RBP9.84□□□□□ -0.83
HPS4-217ENST00000496385 STAT6P42226 847 aa9.84□□□□□ -0.83
HPS4-217ENST00000496385 RAD23BP54727 409 aa9.84□□□□□ -0.83
HPS4-217ENST00000496385 HAND2P61296 217 aa9.84□□□□□ -0.83
HPS4-217ENST00000496385 PABPC4Q13310 644 aaKnown RBP eCLIP9.84□□□□□ -0.83
HPS4-217ENST00000496385 ENOX2Q16206 610 aaKnown RBP9.84□□□□□ -0.83
HPS4-217ENST00000496385 BTNL9Q6UXG8 535 aa9.84□□□□□ -0.83
HPS4-217ENST00000496385 CCDC84Q86UT8 332 aaPredicted RBP9.84□□□□□ -0.83
HPS4-217ENST00000496385 STKLD1Q8NE28 680 aa9.84□□□□□ -0.83
HPS4-217ENST00000496385 TBC1D16Q8TBP0 767 aa9.84□□□□□ -0.83
HPS4-217ENST00000496385 IGDCC4Q8TDY8 1250 aa9.84□□□□□ -0.83
HPS4-217ENST00000496385 ATP8B4Q8TF62 1192 aa9.84□□□□□ -0.83
HPS4-217ENST00000496385 TAF4BQ92750 862 aa9.84□□□□□ -0.83
HPS4-217ENST00000496385 RPS6KC1Q96S38 1066 aa9.84□□□□□ -0.83
HPS4-217ENST00000496385 UBAC1Q9BSL1 405 aa9.84□□□□□ -0.83
HPS4-217ENST00000496385 MIS12Q9H081 205 aa9.84□□□□□ -0.83
HPS4-217ENST00000496385 ARHGEF10LQ9HCE6 1279 aa9.84□□□□□ -0.83
HPS4-217ENST00000496385 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.84□□□□□ -0.832e-6■■■■■ 76
HPS4-217ENST00000496385 DLGAP2Q9P1A6 1054 aa9.84□□□□□ -0.83
HPS4-217ENST00000496385 ZNF510Q9Y2H8 683 aa9.84□□□□□ -0.83
HPS4-217ENST00000496385 ABCB11O95342 1321 aa9.83□□□□□ -0.84
HPS4-217ENST00000496385 MAGEA13PA6NCF6 341 aa9.83□□□□□ -0.84
HPS4-217ENST00000496385 BTNL10A8MVZ5 291 aa9.83□□□□□ -0.84
HPS4-217ENST00000496385 PPEF1O14829 653 aaPredicted RBP9.83□□□□□ -0.84
HPS4-217ENST00000496385 SKIP12755 728 aa9.83□□□□□ -0.84
HPS4-217ENST00000496385 RASSF7Q02833 373 aa9.83□□□□□ -0.84
HPS4-217ENST00000496385 PPP2R5BQ15173 497 aa9.83□□□□□ -0.84
HPS4-217ENST00000496385 NAB2Q15742 525 aa9.83□□□□□ -0.84
HPS4-217ENST00000496385 ASTE1Q2TB18 679 aaPredicted RBP9.83□□□□□ -0.84
HPS4-217ENST00000496385 STYK1Q6J9G0 422 aa9.83□□□□□ -0.84
HPS4-217ENST00000496385 STAG2Q8N3U4 1231 aa9.83□□□□□ -0.84
HPS4-217ENST00000496385 HELBQ8NG08 1087 aaPredicted RBP9.83□□□□□ -0.84
HPS4-217ENST00000496385 LPIN2Q92539 896 aa9.83□□□□□ -0.84
HPS4-217ENST00000496385 INPP5DQ92835 1189 aa9.83□□□□□ -0.84
HPS4-217ENST00000496385 MTMR8Q96EF0 704 aa9.83□□□□□ -0.84
HPS4-217ENST00000496385 TRIM47Q96LD4 638 aa9.83□□□□□ -0.84
HPS4-217ENST00000496385 GPR101Q96P66 508 aaPredicted RBP9.83□□□□□ -0.84
HPS4-217ENST00000496385 PSMB7Q99436 277 aa9.83□□□□□ -0.84
HPS4-217ENST00000496385 SLX1AQ9BQ83 275 aa9.83□□□□□ -0.84
HPS4-217ENST00000496385 CNOT7Q9UIV1 285 aaKnown RBP9.83□□□□□ -0.84
HPS4-217ENST00000496385 BRCA1P38398 1863 aaKnown RBP9.83□□□□□ -0.84
HPS4-217ENST00000496385 SNAP23O00161 211 aa9.83□□□□□ -0.84
HPS4-217ENST00000496385 UNC5CO95185 931 aa9.83□□□□□ -0.84
HPS4-217ENST00000496385 CASP1P29466 404 aa9.83□□□□□ -0.84
HPS4-217ENST00000496385 TUBP50607 506 aa9.83□□□□□ -0.84
HPS4-217ENST00000496385 IFIT5Q13325 482 aaKnown RBP9.83□□□□□ -0.84
HPS4-217ENST00000496385 PPP2R5EQ16537 467 aa9.83□□□□□ -0.84
HPS4-217ENST00000496385 GSTA3Q16772 222 aa9.83□□□□□ -0.84
HPS4-217ENST00000496385 RNF43Q68DV7 783 aa9.83□□□□□ -0.84
HPS4-217ENST00000496385 TTI2Q6NXR4 508 aa9.83□□□□□ -0.84
HPS4-217ENST00000496385 TAOK1Q7L7X3 1001 aa9.83□□□□□ -0.84
HPS4-217ENST00000496385 MICU3Q86XE3 530 aa9.83□□□□□ -0.84
HPS4-217ENST00000496385 MDM1Q8TC05 714 aa9.83□□□□□ -0.84
HPS4-217ENST00000496385 GRAMD1AQ96CP6 724 aa9.83□□□□□ -0.84
HPS4-217ENST00000496385 PCMTD1Q96MG8 357 aaPredicted RBP9.83□□□□□ -0.84
HPS4-217ENST00000496385 TXLNGYQ9BZA5 131 aa9.83□□□□□ -0.84
HPS4-217ENST00000496385 PUS3Q9BZE2 481 aaKnown RBP9.83□□□□□ -0.84
HPS4-217ENST00000496385 PNMA2Q9UL42 364 aa9.83□□□□□ -0.84
HPS4-217ENST00000496385 G3BP2Q9UN86 482 aaKnown RBP9.83□□□□□ -0.84
HPS4-217ENST00000496385 STK38LQ9Y2H1 464 aa9.83□□□□□ -0.84
HPS4-217ENST00000496385 SLC12A7Q9Y666 1083 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms