RNA–Protein interactions for RNA: ENST00000495749.1

TM9SF4-207, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 3,023 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-207ENST00000495749 GOPCQ9HD26 462 aa9.97□□□□□ -0.81
TM9SF4-207ENST00000495749 KCNMB3Q9NPA1 279 aa9.97□□□□□ -0.81
TM9SF4-207ENST00000495749 TMX2Q9Y320 296 aa9.97□□□□□ -0.81
TM9SF4-207ENST00000495749 COL11A2P13942 1736 aaPredicted RBP9.97□□□□□ -0.81
TM9SF4-207ENST00000495749 QSER1Q2KHR3 1735 aa9.97□□□□□ -0.81
TM9SF4-207ENST00000495749 ESYT3A0FGR9 886 aa9.97□□□□□ -0.81
TM9SF4-207ENST00000495749 USP11P51784 963 aa9.97□□□□□ -0.81
TM9SF4-207ENST00000495749 EPHB4P54760 987 aa9.97□□□□□ -0.81
TM9SF4-207ENST00000495749 KCTD16Q68DU8 428 aa9.97□□□□□ -0.81
TM9SF4-207ENST00000495749 CCDC65Q8IXS2 484 aa9.97□□□□□ -0.81
TM9SF4-207ENST00000495749 MICALL2Q8IY33 904 aa9.97□□□□□ -0.81
TM9SF4-207ENST00000495749 ETNPPLQ8TBG4 499 aa9.97□□□□□ -0.81
TM9SF4-207ENST00000495749 BAP1Q92560 729 aa9.97□□□□□ -0.81
TM9SF4-207ENST00000495749 MRIQ9BWK5 157 aa9.97□□□□□ -0.81
TM9SF4-207ENST00000495749 MAST2Q6P0Q8 1798 aa9.97□□□□□ -0.81
TM9SF4-207ENST00000495749 ZSCAN5CA6NGD5 496 aaPredicted RBP9.96□□□□□ -0.81
TM9SF4-207ENST00000495749 EBAG9O00559 213 aa9.96□□□□□ -0.81
TM9SF4-207ENST00000495749 GAS7O60861 476 aa9.96□□□□□ -0.81
TM9SF4-207ENST00000495749 GCFC2P16383 781 aaKnown RBP9.96□□□□□ -0.81
TM9SF4-207ENST00000495749 EPS15P42566 896 aa9.96□□□□□ -0.81
TM9SF4-207ENST00000495749 CASP4P49662 377 aa9.96□□□□□ -0.81
TM9SF4-207ENST00000495749 RNASE9P60153 205 aaKnown RBP9.96□□□□□ -0.81
TM9SF4-207ENST00000495749 ITIH3Q06033 890 aa9.96□□□□□ -0.81
TM9SF4-207ENST00000495749 MTMR2Q13614 643 aa9.96□□□□□ -0.81
TM9SF4-207ENST00000495749 PPP1R18Q6NYC8 613 aa9.96□□□□□ -0.81
TM9SF4-207ENST00000495749 MYCT1Q8N699 235 aa9.96□□□□□ -0.81
TM9SF4-207ENST00000495749 GMCL1P1Q8NEA9 526 aa9.96□□□□□ -0.81
TM9SF4-207ENST00000495749 IFT81Q8WYA0 676 aa9.96□□□□□ -0.81
TM9SF4-207ENST00000495749 IQCDQ96DY2 449 aa9.96□□□□□ -0.81
TM9SF4-207ENST00000495749 NOX5Q96PH1 765 aa9.96□□□□□ -0.81
TM9SF4-207ENST00000495749 TSG101Q99816 390 aa9.96□□□□□ -0.81
TM9SF4-207ENST00000495749 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.96□□□□□ -0.81
TM9SF4-207ENST00000495749 WDR11Q9BZH6 1224 aa9.96□□□□□ -0.81
TM9SF4-207ENST00000495749 VCPKMTQ9H867 229 aa9.96□□□□□ -0.81
TM9SF4-207ENST00000495749 WRAP73Q9P2S5 460 aaPredicted RBP9.96□□□□□ -0.81
TM9SF4-207ENST00000495749 HERC5Q9UII4 1024 aaKnown RBP9.96□□□□□ -0.81
TM9SF4-207ENST00000495749 CTDP1Q9Y5B0 961 aaPredicted RBP9.96□□□□□ -0.81
TM9SF4-207ENST00000495749 CDK5RAP2Q96SN8 1893 aa9.96□□□□□ -0.81
TM9SF4-207ENST00000495749 OPA1O60313 960 aa9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 HSF2BPO75031 334 aa9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 LCA5LO95447 670 aa9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 NR2F2P24468 414 aa9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 GMPSP49915 693 aaPredicted RBP9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 POLR2FP61218 127 aaKnown RBP9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 COG2Q14746 738 aa9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 GRIPAP1Q4V328 841 aa9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 TTMPQ5BVD1 217 aa9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 KLHDC7AQ5VTJ3 777 aa9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 EMBQ6PCB8 327 aa9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 ZNF572Q7Z3I7 529 aaPredicted RBP9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 MICALL1Q8N3F8 863 aa9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 GUF1Q8N442 669 aaKnown RBP9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 SH2D3CQ8N5H7 860 aa9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 ELMO3Q96BJ8 720 aa9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 ZNF577Q9BSK1 485 aa9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 EFCC1Q9HA90 598 aa9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 COL20A1Q9P218 1284 aa9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 COL4A5P29400 1685 aa9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 MYO3BQ8WXR4 1341 aa9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 PVALEFA0A1B0GWK0 134 aa9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 GOLGA8KD6RF30 607 aa9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 ECM2O94769 699 aaPredicted RBP9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 FGFR1OPO95684 399 aaKnown RBP9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 FTCDO95954 541 aa9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 KRT14P02533 472 aa9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 GLI1P08151 1106 aa9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 SPIRE1Q08AE8 756 aa9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 PDXDC1Q6P996 788 aa9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 LRRC55Q6ZSA7 311 aa9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 EFCAB13Q8IY85 973 aa9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 NT5C3AQ9H0P0 336 aa9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 CNOT7Q9UIV1 285 aaKnown RBP9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 NFU1Q9UMS0 254 aa9.96□□□□□ -0.82
TM9SF4-207ENST00000495749 TISP43B9A030 160 aa9.95□□□□□ -0.82
TM9SF4-207ENST00000495749 NFKBIEO00221 500 aa9.95□□□□□ -0.82
TM9SF4-207ENST00000495749 EIF3HO15372 352 aaKnown RBP eCLIP9.95□□□□□ -0.82
TM9SF4-207ENST00000495749 SREBF1P36956 1147 aa9.95□□□□□ -0.82
TM9SF4-207ENST00000495749 CARSP49589 748 aaKnown RBP9.95□□□□□ -0.82
TM9SF4-207ENST00000495749 LIG3P49916 1009 aa9.95□□□□□ -0.82
TM9SF4-207ENST00000495749 ATP1A2P50993 1020 aa9.95□□□□□ -0.82
TM9SF4-207ENST00000495749 PDCLQ13371 301 aa9.95□□□□□ -0.82
TM9SF4-207ENST00000495749 GIT2Q14161 759 aa9.95□□□□□ -0.82
TM9SF4-207ENST00000495749 ASTE1Q2TB18 679 aaPredicted RBP9.95□□□□□ -0.82
TM9SF4-207ENST00000495749 CFAP221Q4G0U5 840 aa9.95□□□□□ -0.82
TM9SF4-207ENST00000495749 COBLL1Q53SF7 1204 aa9.95□□□□□ -0.82
TM9SF4-207ENST00000495749 TADA2BQ86TJ2 420 aa9.95□□□□□ -0.82
TM9SF4-207ENST00000495749 CHURC1Q8WUH1 139 aa9.95□□□□□ -0.82
TM9SF4-207ENST00000495749 ZIM3Q96PE6 472 aa9.95□□□□□ -0.82
TM9SF4-207ENST00000495749 SH3GL2Q99962 352 aa9.95□□□□□ -0.82
TM9SF4-207ENST00000495749 LSM14BQ9BX40 385 aaKnown RBP9.95□□□□□ -0.82
TM9SF4-207ENST00000495749 DEFB129Q9H1M3 183 aa9.95□□□□□ -0.82
TM9SF4-207ENST00000495749 PACSIN2Q9UNF0 486 aaPredicted RBP9.95□□□□□ -0.82
TM9SF4-207ENST00000495749 RABGAP1Q9Y3P9 1069 aa9.95□□□□□ -0.82
TM9SF4-207ENST00000495749 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.95□□□□□ -0.82
TM9SF4-207ENST00000495749 GRIN2DO15399 1336 aa9.95□□□□□ -0.82
TM9SF4-207ENST00000495749 TBCAO75347 108 aaKnown RBP9.95□□□□□ -0.82
TM9SF4-207ENST00000495749 FAM153BP0C7A2 387 aa9.95□□□□□ -0.82
TM9SF4-207ENST00000495749 SLC12A3P55017 1021 aa9.95□□□□□ -0.82
TM9SF4-207ENST00000495749 FKBP3Q00688 224 aaKnown RBP9.95□□□□□ -0.82
TM9SF4-207ENST00000495749 GUCY2DQ02846 1103 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms