RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 RBL2Q08999 1139 aa21.76■■□□□ 1.07
HDAC4-212ENST00000495497 TARBP2Q15633 366 aaKnown RBP21.76■■□□□ 1.07
HDAC4-212ENST00000495497 ECM1Q16610 540 aa21.76■■□□□ 1.07
HDAC4-212ENST00000495497 ARL6IP4Q66PJ3 421 aaKnown RBP21.76■■□□□ 1.07
HDAC4-212ENST00000495497 TRAF7Q6Q0C0 670 aa21.76■■□□□ 1.07
HDAC4-212ENST00000495497 TMEM199Q8N511 208 aa21.76■■□□□ 1.07
HDAC4-212ENST00000495497 ERMNQ8TAM6 284 aa21.76■■□□□ 1.07
HDAC4-212ENST00000495497 NEK9Q8TD19 979 aa21.76■■□□□ 1.07
HDAC4-212ENST00000495497 CEP89Q96ST8 783 aa21.76■■□□□ 1.07
HDAC4-212ENST00000495497 POLR3CQ9BUI4 534 aaPredicted RBP21.76■■□□□ 1.07
HDAC4-212ENST00000495497 LTBP2Q14767 1821 aa21.76■■□□□ 1.07
HDAC4-212ENST00000495497 BMP15O95972 392 aa21.75■■□□□ 1.07
HDAC4-212ENST00000495497 CCT6AP40227 531 aaKnown RBP21.75■■□□□ 1.07
HDAC4-212ENST00000495497 TMEM62Q0P6H9 643 aa21.75■■□□□ 1.07
HDAC4-212ENST00000495497 TAF2Q6P1X5 1199 aa21.75■■□□□ 1.07
HDAC4-212ENST00000495497 LRRC8DQ7L1W4 858 aa21.75■■□□□ 1.07
HDAC4-212ENST00000495497 METTL13Q8N6R0 699 aa21.75■■□□□ 1.07
HDAC4-212ENST00000495497 PIGOQ8TEQ8 1089 aa21.75■■□□□ 1.07
HDAC4-212ENST00000495497 UBE2OQ9C0C9 1292 aaKnown RBP21.75■■□□□ 1.07
HDAC4-212ENST00000495497 SMIM35A0A1B0GVV1 85 aa21.74■■□□□ 1.07
HDAC4-212ENST00000495497 ANP32AP39687 249 aaKnown RBP21.74■■□□□ 1.07
HDAC4-212ENST00000495497 GPNMBQ14956 572 aa21.74■■□□□ 1.07
HDAC4-212ENST00000495497 POTEGQ6S5H5 508 aa21.74■■□□□ 1.07
HDAC4-212ENST00000495497 C16orf59Q7L2K0 433 aa21.74■■□□□ 1.07
HDAC4-212ENST00000495497 DEFB128Q7Z7B8 93 aa21.74■■□□□ 1.07
HDAC4-212ENST00000495497 LRRC71Q8N4P6 559 aa21.74■■□□□ 1.07
HDAC4-212ENST00000495497 SNX29Q8TEQ0 813 aa21.74■■□□□ 1.07
HDAC4-212ENST00000495497 VWCEQ96DN2 955 aa21.74■■□□□ 1.07
HDAC4-212ENST00000495497 CHAMP1Q96JM3 812 aa21.74■■□□□ 1.07
HDAC4-212ENST00000495497 CEP170P1Q96L14 293 aa21.74■■□□□ 1.07
HDAC4-212ENST00000495497 ZNF396Q96N95 335 aaPredicted RBP21.74■■□□□ 1.07
HDAC4-212ENST00000495497 MMTAG2Q9BU76 263 aaKnown RBP21.74■■□□□ 1.07
HDAC4-212ENST00000495497 OSBPL7Q9BZF2 842 aa21.74■■□□□ 1.07
HDAC4-212ENST00000495497 RAB34Q9BZG1 259 aa21.74■■□□□ 1.07
HDAC4-212ENST00000495497 TUFT1Q9NNX1 390 aa21.74■■□□□ 1.07
HDAC4-212ENST00000495497 COLQQ9Y215 455 aaPredicted RBP21.74■■□□□ 1.07
HDAC4-212ENST00000495497 MYH9P35579 1960 aaKnown RBP21.74■■□□□ 1.07
HDAC4-212ENST00000495497 WDR81Q562E7 1941 aa21.73■■□□□ 1.07
HDAC4-212ENST00000495497 RSPH10B2B2RC85 870 aa21.73■■□□□ 1.07
HDAC4-212ENST00000495497 LYPLA2O95372 231 aa21.73■■□□□ 1.07
HDAC4-212ENST00000495497 RSPH10BP0C881 870 aa21.73■■□□□ 1.07
HDAC4-212ENST00000495497 RPA1P27694 616 aa21.73■■□□□ 1.07
HDAC4-212ENST00000495497 CLCN3P51790 818 aa21.73■■□□□ 1.07
HDAC4-212ENST00000495497 TBC1D8BQ0IIM8 1120 aa21.73■■□□□ 1.07
HDAC4-212ENST00000495497 MBTPS1Q14703 1052 aa21.73■■□□□ 1.07
HDAC4-212ENST00000495497 XKR9Q5GH70 373 aa21.73■■□□□ 1.07
HDAC4-212ENST00000495497 EFCAB12Q6NXP0 572 aa21.73■■□□□ 1.07
HDAC4-212ENST00000495497 KIAA0319LQ8IZA0 1049 aa21.73■■□□□ 1.07
HDAC4-212ENST00000495497 SUGCTQ9HAC7 445 aa21.73■■□□□ 1.07
HDAC4-212ENST00000495497 CYP26B1Q9NR63 512 aa21.73■■□□□ 1.07
HDAC4-212ENST00000495497 BMP2KQ9NSY1 1161 aaPredicted RBP21.73■■□□□ 1.07
HDAC4-212ENST00000495497 CHRNA1P02708 482 aa21.72■■□□□ 1.07
HDAC4-212ENST00000495497 DDIT3P35638 169 aa21.72■■□□□ 1.07
HDAC4-212ENST00000495497 NASPP49321 788 aaPredicted RBP21.72■■□□□ 1.07
HDAC4-212ENST00000495497 PPIGQ13427 754 aaKnown RBP eCLIP21.72■■□□□ 1.07
HDAC4-212ENST00000495497 SLC39A14Q15043 492 aa21.72■■□□□ 1.07
HDAC4-212ENST00000495497 ZRSR1Q15695 479 aaKnown RBP21.72■■□□□ 1.07
HDAC4-212ENST00000495497 KRT79Q5XKE5 535 aa21.72■■□□□ 1.07
HDAC4-212ENST00000495497 HAUS3Q68CZ6 603 aa21.72■■□□□ 1.07
HDAC4-212ENST00000495497 OTUD6AQ7L8S5 288 aa21.72■■□□□ 1.07
HDAC4-212ENST00000495497 RPAINQ86UA6 219 aa21.72■■□□□ 1.07
HDAC4-212ENST00000495497 RSPH3Q86UC2 560 aa21.72■■□□□ 1.07
HDAC4-212ENST00000495497 LINC01465Q8N7H1 131 aa21.72■■□□□ 1.07
HDAC4-212ENST00000495497 CLIC6Q96NY7 704 aa21.72■■□□□ 1.07
HDAC4-212ENST00000495497 PPP1R16BQ96T49 567 aa21.72■■□□□ 1.07
HDAC4-212ENST00000495497 PRO3102Q9H379 93 aa21.72■■□□□ 1.07
HDAC4-212ENST00000495497 IL23AQ9NPF7 189 aa21.72■■□□□ 1.07
HDAC4-212ENST00000495497 FBXO2Q9UK22 296 aaPredicted RBP21.72■■□□□ 1.07
HDAC4-212ENST00000495497 MAGEB2O15479 319 aa21.71■■□□□ 1.07
HDAC4-212ENST00000495497 NBNO60934 754 aa21.71■■□□□ 1.07
HDAC4-212ENST00000495497 MAFO75444 373 aaPredicted RBP21.71■■□□□ 1.07
HDAC4-212ENST00000495497 DNM1Q05193 864 aaKnown RBP21.71■■□□□ 1.07
HDAC4-212ENST00000495497 MGAT3Q09327 533 aa21.71■■□□□ 1.07
HDAC4-212ENST00000495497 MKRN4PQ13434 485 aaPredicted RBP21.71■■□□□ 1.07
HDAC4-212ENST00000495497 DRP2Q13474 957 aa21.71■■□□□ 1.07
HDAC4-212ENST00000495497 STK38Q15208 465 aa21.71■■□□□ 1.07
HDAC4-212ENST00000495497 SPECC1Q5M775 1068 aa21.71■■□□□ 1.07
HDAC4-212ENST00000495497 C9orf50Q5SZB4 431 aa21.71■■□□□ 1.07
HDAC4-212ENST00000495497 LINC00301Q8NCQ3 95 aa21.71■■□□□ 1.07
HDAC4-212ENST00000495497 PLIN2Q99541 437 aa21.71■■□□□ 1.07
HDAC4-212ENST00000495497 CSRNP2Q9H175 543 aa21.71■■□□□ 1.07
HDAC4-212ENST00000495497 KIAA1024Q9UPX6 916 aa21.71■■□□□ 1.07
HDAC4-212ENST00000495497 CDY2AQ9Y6F7 541 aa21.71■■□□□ 1.07
HDAC4-212ENST00000495497 KAT6AQ92794 2004 aa21.71■■□□□ 1.07
HDAC4-212ENST00000495497 CEP290O15078 2479 aa21.7■■□□□ 1.06
HDAC4-212ENST00000495497 CAND2O75155 1236 aa21.7■■□□□ 1.06
HDAC4-212ENST00000495497 VTNP04004 478 aa21.7■■□□□ 1.06
HDAC4-212ENST00000495497 BMP8BP34820 402 aa21.7■■□□□ 1.06
HDAC4-212ENST00000495497 MRPS6P82932 125 aaKnown RBP21.7■■□□□ 1.06
HDAC4-212ENST00000495497 FAM26DQ5JW98 314 aa21.7■■□□□ 1.06
HDAC4-212ENST00000495497 ZNF668Q96K58 619 aaPredicted RBP21.7■■□□□ 1.06
HDAC4-212ENST00000495497 NACC1Q96RE7 527 aa21.7■■□□□ 1.06
HDAC4-212ENST00000495497 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.7■■□□□ 1.06
HDAC4-212ENST00000495497 CDHR5Q9HBB8 845 aa21.7■■□□□ 1.06
HDAC4-212ENST00000495497 TSHZ2Q9NRE2 1034 aa21.7■■□□□ 1.06
HDAC4-212ENST00000495497 ANKEF1Q9NU02 776 aa21.7■■□□□ 1.06
HDAC4-212ENST00000495497 DDX19AQ9NUU7 478 aaKnown RBP21.7■■□□□ 1.06
HDAC4-212ENST00000495497 SRPRBQ9Y5M8 271 aaKnown RBP21.7■■□□□ 1.06
HDAC4-212ENST00000495497 STK24Q9Y6E0 443 aa21.7■■□□□ 1.06
HDAC4-212ENST00000495497 IGKV6-21A0A0C4DH24 114 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms