RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 HSD17B14Q9BPX1 270 aa13.52□□□□□ -0.25
CSNK1E-213ENST00000495232 JPH2Q9BR39 696 aaPredicted RBP13.52□□□□□ -0.25
CSNK1E-213ENST00000495232 POLR3CQ9BUI4 534 aaPredicted RBP13.52□□□□□ -0.25
CSNK1E-213ENST00000495232 NIFKQ9BYG3 293 aaKnown RBP13.52□□□□□ -0.25
CSNK1E-213ENST00000495232 WNT8AQ9H1J5 351 aa13.52□□□□□ -0.25
CSNK1E-213ENST00000495232 PCDH10Q9P2E7 1040 aa13.52□□□□□ -0.25
CSNK1E-213ENST00000495232 CLIC4Q9Y696 253 aa13.52□□□□□ -0.25
CSNK1E-213ENST00000495232 CTSHP09668 335 aa13.51□□□□□ -0.25
CSNK1E-213ENST00000495232 RPA1P27694 616 aa13.51□□□□□ -0.25
CSNK1E-213ENST00000495232 BMP8BP34820 402 aa13.51□□□□□ -0.25
CSNK1E-213ENST00000495232 DNM2P50570 870 aa13.51□□□□□ -0.25
CSNK1E-213ENST00000495232 PKP1Q13835 747 aa13.51□□□□□ -0.25
CSNK1E-213ENST00000495232 TRIM71Q2Q1W2 868 aaKnown RBP13.51□□□□□ -0.25
CSNK1E-213ENST00000495232 FOXD4L6Q3SYB3 417 aaPredicted RBP13.51□□□□□ -0.25
CSNK1E-213ENST00000495232 XKR9Q5GH70 373 aa13.51□□□□□ -0.25
CSNK1E-213ENST00000495232 ZNF618Q5T7W0 954 aa13.51□□□□□ -0.25
CSNK1E-213ENST00000495232 PLA2G4FQ68DD2 849 aa13.51□□□□□ -0.25
CSNK1E-213ENST00000495232 EFCAB12Q6NXP0 572 aa13.51□□□□□ -0.25
CSNK1E-213ENST00000495232 FOXD4L3Q6VB84 417 aaPredicted RBP13.51□□□□□ -0.25
CSNK1E-213ENST00000495232 ANO5Q75V66 913 aa13.51□□□□□ -0.25
CSNK1E-213ENST00000495232 DEFB128Q7Z7B8 93 aa13.51□□□□□ -0.25
CSNK1E-213ENST00000495232 CATSPER3Q86XQ3 398 aa13.51□□□□□ -0.25
CSNK1E-213ENST00000495232 IGSF22Q8N9C0 903 aa13.51□□□□□ -0.25
CSNK1E-213ENST00000495232 SNX29Q8TEQ0 813 aa13.51□□□□□ -0.25
CSNK1E-213ENST00000495232 SLC7A3Q8WY07 619 aa13.51□□□□□ -0.25
CSNK1E-213ENST00000495232 WNT8BQ93098 351 aa13.51□□□□□ -0.25
CSNK1E-213ENST00000495232 ZBTB10Q96DT7 871 aa13.51□□□□□ -0.25
CSNK1E-213ENST00000495232 AK8Q96MA6 479 aa13.51□□□□□ -0.25
CSNK1E-213ENST00000495232 MAP7D2Q96T17 732 aa13.51□□□□□ -0.25
CSNK1E-213ENST00000495232 FTOQ9C0B1 505 aaKnown RBP eCLIP13.51□□□□□ -0.25
CSNK1E-213ENST00000495232 SUGCTQ9HAC7 445 aa13.51□□□□□ -0.25
CSNK1E-213ENST00000495232 CYP26B1Q9NR63 512 aa13.51□□□□□ -0.25
CSNK1E-213ENST00000495232 PPME1Q9Y570 386 aa13.51□□□□□ -0.25
CSNK1E-213ENST00000495232 ATP6V1DQ9Y5K8 247 aa13.51□□□□□ -0.25
CSNK1E-213ENST00000495232 TMEM150BA6NC51 233 aa13.5□□□□□ -0.25
CSNK1E-213ENST00000495232 ZBTB42B2RXF5 422 aa13.5□□□□□ -0.25
CSNK1E-213ENST00000495232 LYPLA2O95372 231 aa13.5□□□□□ -0.25
CSNK1E-213ENST00000495232 C22orf31O95567 290 aa13.5□□□□□ -0.25
CSNK1E-213ENST00000495232 PFKMP08237 780 aa13.5□□□□□ -0.25
CSNK1E-213ENST00000495232 MUTP22033 750 aa13.5□□□□□ -0.25
CSNK1E-213ENST00000495232 POLGP54098 1239 aaPredicted RBP13.5□□□□□ -0.25
CSNK1E-213ENST00000495232 STK38Q15208 465 aa13.5□□□□□ -0.25
CSNK1E-213ENST00000495232 ZRSR1Q15695 479 aaKnown RBP13.5□□□□□ -0.25
CSNK1E-213ENST00000495232 IL17AQ16552 155 aa13.5□□□□□ -0.25
CSNK1E-213ENST00000495232 PSRC1Q6PGN9 363 aaPredicted RBP13.5□□□□□ -0.25
CSNK1E-213ENST00000495232 RPAINQ86UA6 219 aa13.5□□□□□ -0.25
CSNK1E-213ENST00000495232 CDK5RAP3Q96JB5 506 aa13.5□□□□□ -0.25
CSNK1E-213ENST00000495232 NACC1Q96RE7 527 aa13.5□□□□□ -0.25
CSNK1E-213ENST00000495232 USP28Q96RU2 1077 aa13.5□□□□□ -0.25
CSNK1E-213ENST00000495232 SH2D3AQ9BRG2 576 aa13.5□□□□□ -0.25
CSNK1E-213ENST00000495232 IL23AQ9NPF7 189 aa13.5□□□□□ -0.25
CSNK1E-213ENST00000495232 ANKEF1Q9NU02 776 aa13.5□□□□□ -0.25
CSNK1E-213ENST00000495232 WRAP73Q9P2S5 460 aaPredicted RBP13.5□□□□□ -0.25
CSNK1E-213ENST00000495232 CFAP45Q9UL16 551 aa13.5□□□□□ -0.25
CSNK1E-213ENST00000495232 AKT3Q9Y243 479 aa13.5□□□□□ -0.25
CSNK1E-213ENST00000495232 MYH15Q9Y2K3 1946 aa13.49□□□□□ -0.25
CSNK1E-213ENST00000495232 TANC1Q9C0D5 1861 aa13.49□□□□□ -0.25
CSNK1E-213ENST00000495232 KDM3AQ9Y4C1 1321 aa13.49□□□□□ -0.25
CSNK1E-213ENST00000495232 MED24O75448 989 aa13.49□□□□□ -0.25
CSNK1E-213ENST00000495232 STBD1O95210 358 aa13.49□□□□□ -0.25
CSNK1E-213ENST00000495232 SPATA31C1P0DKV0 1188 aa13.49□□□□□ -0.25
CSNK1E-213ENST00000495232 ACRP10323 421 aa13.49□□□□□ -0.25
CSNK1E-213ENST00000495232 ACTN1P12814 892 aa13.49□□□□□ -0.25
CSNK1E-213ENST00000495232 XRCC6P12956 609 aaKnown RBP eCLIP13.49□□□□□ -0.25
CSNK1E-213ENST00000495232 MARCKSP29966 332 aaPredicted RBP13.49□□□□□ -0.25
CSNK1E-213ENST00000495232 LONP1P36776 959 aaKnown RBP13.49□□□□□ -0.25
CSNK1E-213ENST00000495232 RFC5P40937 340 aa13.49□□□□□ -0.25
CSNK1E-213ENST00000495232 UBA7P41226 1012 aa13.49□□□□□ -0.25
CSNK1E-213ENST00000495232 NPEPPSP55786 919 aa13.49□□□□□ -0.25
CSNK1E-213ENST00000495232 MRPS6P82932 125 aaKnown RBP13.49□□□□□ -0.25
CSNK1E-213ENST00000495232 TMEM62Q0P6H9 643 aa13.49□□□□□ -0.25
CSNK1E-213ENST00000495232 TARBP2Q15633 366 aaKnown RBP13.49□□□□□ -0.25
CSNK1E-213ENST00000495232 ATL3Q6DD88 541 aa13.49□□□□□ -0.25
CSNK1E-213ENST00000495232 POTEGQ6S5H5 508 aa13.49□□□□□ -0.25
CSNK1E-213ENST00000495232 LRRC71Q8N4P6 559 aa13.49□□□□□ -0.25
CSNK1E-213ENST00000495232 RASSF8Q8NHQ8 419 aa13.49□□□□□ -0.25
CSNK1E-213ENST00000495232 PIGOQ8TEQ8 1089 aa13.49□□□□□ -0.25
CSNK1E-213ENST00000495232 MTIF3Q9H2K0 278 aaKnown RBP13.49□□□□□ -0.25
CSNK1E-213ENST00000495232 TFIP11Q9UBB9 837 aaKnown RBP13.49□□□□□ -0.25
CSNK1E-213ENST00000495232 KIAA1024Q9UPX6 916 aa13.49□□□□□ -0.25
CSNK1E-213ENST00000495232 COLQQ9Y215 455 aaPredicted RBP13.49□□□□□ -0.25
CSNK1E-213ENST00000495232 EVPLQ92817 2033 aa13.49□□□□□ -0.25
CSNK1E-213ENST00000495232 PP2D1A8MPX8 630 aa13.48□□□□□ -0.25
CSNK1E-213ENST00000495232 MAFO75444 373 aaPredicted RBP13.48□□□□□ -0.25
CSNK1E-213ENST00000495232 BRD1O95696 1058 aa13.48□□□□□ -0.25
CSNK1E-213ENST00000495232 FGBP02675 491 aa13.48□□□□□ -0.25
CSNK1E-213ENST00000495232 CDC25AP30304 524 aa13.48□□□□□ -0.25
CSNK1E-213ENST00000495232 CLCN3P51790 818 aa13.48□□□□□ -0.25
CSNK1E-213ENST00000495232 NUCB2P80303 420 aa13.48□□□□□ -0.25
CSNK1E-213ENST00000495232 CDC42EP1Q00587 391 aa13.48□□□□□ -0.25
CSNK1E-213ENST00000495232 SLC39A14Q15043 492 aa13.48□□□□□ -0.25
CSNK1E-213ENST00000495232 KIAA0319LQ8IZA0 1049 aa13.48□□□□□ -0.25
CSNK1E-213ENST00000495232 TDHQ8IZJ6 230 aa13.48□□□□□ -0.25
CSNK1E-213ENST00000495232 ZNF710Q8N1W2 664 aa13.48□□□□□ -0.25
CSNK1E-213ENST00000495232 CALML4Q96GE6 196 aa13.48□□□□□ -0.25
CSNK1E-213ENST00000495232 SCLT1Q96NL6 688 aa13.48□□□□□ -0.25
CSNK1E-213ENST00000495232 NT5C3AQ9H0P0 336 aa13.48□□□□□ -0.25
CSNK1E-213ENST00000495232 DDX19AQ9NUU7 478 aaKnown RBP13.48□□□□□ -0.25
CSNK1E-213ENST00000495232 DNM3Q9UQ16 869 aa13.48□□□□□ -0.25
CSNK1E-213ENST00000495232 GINS2Q9Y248 185 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms