RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 GJB5O95377 273 aa19.84■□□□□ 0.77
HDAC4-211ENST00000494800 C22orf31O95567 290 aa19.84■□□□□ 0.77
HDAC4-211ENST00000494800 GUCY1B3Q02153 619 aa19.84■□□□□ 0.77
HDAC4-211ENST00000494800 LPIN1Q14693 890 aa19.84■□□□□ 0.77
HDAC4-211ENST00000494800 TCTN1Q2MV58 587 aa19.84■□□□□ 0.77
HDAC4-211ENST00000494800 XKR3Q5GH77 459 aa19.84■□□□□ 0.77
HDAC4-211ENST00000494800 EARS2Q5JPH6 523 aaKnown RBP19.84■□□□□ 0.77
HDAC4-211ENST00000494800 ODR4Q5SWX8 454 aa19.84■□□□□ 0.77
HDAC4-211ENST00000494800 B3GNT9Q6UX72 402 aa19.84■□□□□ 0.77
HDAC4-211ENST00000494800 FAM43BQ6ZT52 329 aaPredicted RBP19.84■□□□□ 0.77
HDAC4-211ENST00000494800 POTEDQ86YR6 584 aa19.84■□□□□ 0.77
HDAC4-211ENST00000494800 ZNF710Q8N1W2 664 aa19.84■□□□□ 0.77
HDAC4-211ENST00000494800 MAP7D2Q96T17 732 aa19.84■□□□□ 0.77
HDAC4-211ENST00000494800 KDM3AQ9Y4C1 1321 aa19.83■□□□□ 0.77
HDAC4-211ENST00000494800 ZBTB42B2RXF5 422 aa19.83■□□□□ 0.77
HDAC4-211ENST00000494800 NEMFO60524 1076 aa19.83■□□□□ 0.77
HDAC4-211ENST00000494800 PSMC5P62195 406 aa19.83■□□□□ 0.77
HDAC4-211ENST00000494800 PAK2Q13177 524 aa19.83■□□□□ 0.77
HDAC4-211ENST00000494800 CALCRLQ16602 461 aa19.83■□□□□ 0.77
HDAC4-211ENST00000494800 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.83■□□□□ 0.77
HDAC4-211ENST00000494800 FBXO18Q8NFZ0 1043 aa19.83■□□□□ 0.77
HDAC4-211ENST00000494800 FTHL17Q9BXU8 183 aa19.83■□□□□ 0.77
HDAC4-211ENST00000494800 FOXP1Q9H334 677 aaPredicted RBP19.83■□□□□ 0.77
HDAC4-211ENST00000494800 SEPT9Q9UHD8 586 aaPredicted RBP19.83■□□□□ 0.77
HDAC4-211ENST00000494800 GINS2Q9Y248 185 aa19.83■□□□□ 0.77
HDAC4-211ENST00000494800 INSL6Q9Y581 213 aa19.83■□□□□ 0.77
HDAC4-211ENST00000494800 FAM205CA6NFA0 338 aa19.82■□□□□ 0.76
HDAC4-211ENST00000494800 ZNF862O60290 1169 aa19.82■□□□□ 0.76
HDAC4-211ENST00000494800 TBC1D8BQ0IIM8 1120 aa19.82■□□□□ 0.76
HDAC4-211ENST00000494800 UGCGQ16739 394 aa19.82■□□□□ 0.76
HDAC4-211ENST00000494800 FAM117BQ6P1L5 589 aa19.82■□□□□ 0.76
HDAC4-211ENST00000494800 KIAA0319LQ8IZA0 1049 aa19.82■□□□□ 0.76
HDAC4-211ENST00000494800 PRDM12Q9H4Q4 367 aa19.82■□□□□ 0.76
HDAC4-211ENST00000494800 VAV3Q9UKW4 847 aa19.82■□□□□ 0.76
HDAC4-211ENST00000494800 TET1Q8NFU7 2136 aa19.82■□□□□ 0.76
HDAC4-211ENST00000494800 P4HBP07237 508 aaKnown RBP19.81■□□□□ 0.76
HDAC4-211ENST00000494800 QARSP47897 775 aaKnown RBP19.81■□□□□ 0.76
HDAC4-211ENST00000494800 MKRN4PQ13434 485 aaPredicted RBP19.81■□□□□ 0.76
HDAC4-211ENST00000494800 NCAPH2Q6IBW4 605 aa19.81■□□□□ 0.76
HDAC4-211ENST00000494800 EFCAB12Q6NXP0 572 aa19.81■□□□□ 0.76
HDAC4-211ENST00000494800 TMCO2Q7Z6W1 182 aaPredicted RBP19.81■□□□□ 0.76
HDAC4-211ENST00000494800 BANK1Q8NDB2 785 aa19.81■□□□□ 0.76
HDAC4-211ENST00000494800 MAFAQ8NHW3 353 aaPredicted RBP19.81■□□□□ 0.76
HDAC4-211ENST00000494800 HAS1Q92839 578 aa19.81■□□□□ 0.76
HDAC4-211ENST00000494800 NIFKQ9BYG3 293 aaKnown RBP19.81■□□□□ 0.76
HDAC4-211ENST00000494800 OSBPL7Q9BZF2 842 aa19.81■□□□□ 0.76
HDAC4-211ENST00000494800 PCDHA12Q9UN75 941 aa19.81■□□□□ 0.76
HDAC4-211ENST00000494800 AKT3Q9Y243 479 aa19.81■□□□□ 0.76
HDAC4-211ENST00000494800 DDX11L8A8MPP1 907 aa19.8■□□□□ 0.76
HDAC4-211ENST00000494800 CD52P31358 61 aa19.8■□□□□ 0.76
HDAC4-211ENST00000494800 DNM2P50570 870 aa19.8■□□□□ 0.76
HDAC4-211ENST00000494800 ORC2Q13416 577 aaPredicted RBP19.8■□□□□ 0.76
HDAC4-211ENST00000494800 EPHA7Q15375 998 aa19.8■□□□□ 0.76
HDAC4-211ENST00000494800 EXOC8Q8IYI6 725 aa19.8■□□□□ 0.76
HDAC4-211ENST00000494800 TOP1MTQ969P6 601 aa19.8■□□□□ 0.76
HDAC4-211ENST00000494800 TMX3Q96JJ7 454 aa19.8■□□□□ 0.76
HDAC4-211ENST00000494800 YME1L1Q96TA2 773 aa19.8■□□□□ 0.76
HDAC4-211ENST00000494800 JPH2Q9BR39 696 aaPredicted RBP19.8■□□□□ 0.76
HDAC4-211ENST00000494800 SUGCTQ9HAC7 445 aa19.8■□□□□ 0.76
HDAC4-211ENST00000494800 PADI3Q9ULW8 664 aa19.8■□□□□ 0.76
HDAC4-211ENST00000494800 NOL7Q9UMY1 257 aaKnown RBP19.8■□□□□ 0.76
HDAC4-211ENST00000494800 RPS6KA5O75582 802 aa19.79■□□□□ 0.76
HDAC4-211ENST00000494800 UPP2O95045 317 aa19.79■□□□□ 0.76
HDAC4-211ENST00000494800 ATP2B1P20020 1258 aa19.79■□□□□ 0.76
HDAC4-211ENST00000494800 CLCN3P51790 818 aa19.79■□□□□ 0.76
HDAC4-211ENST00000494800 CRYBB1P53674 252 aaPredicted RBP19.79■□□□□ 0.76
HDAC4-211ENST00000494800 CDC42EP1Q00587 391 aa19.79■□□□□ 0.76
HDAC4-211ENST00000494800 TAP1Q03518 808 aa19.79■□□□□ 0.76
HDAC4-211ENST00000494800 MTERF2Q49AM1 385 aa19.79■□□□□ 0.76
HDAC4-211ENST00000494800 NOSTRINQ8IVI9 506 aa19.79■□□□□ 0.76
HDAC4-211ENST00000494800 AGO3Q9H9G7 860 aaKnown RBP19.79■□□□□ 0.76
HDAC4-211ENST00000494800 RNF216Q9NWF9 866 aaPredicted RBP19.79■□□□□ 0.76
HDAC4-211ENST00000494800 MYH9P35579 1960 aaKnown RBP19.78■□□□□ 0.76
HDAC4-211ENST00000494800 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.78■□□□□ 0.76
HDAC4-211ENST00000494800 EML1O00423 815 aa19.78■□□□□ 0.76
HDAC4-211ENST00000494800 GPR182O15218 404 aa19.78■□□□□ 0.76
HDAC4-211ENST00000494800 VTNP04004 478 aa19.78■□□□□ 0.76
HDAC4-211ENST00000494800 IGFBP4P22692 258 aa19.78■□□□□ 0.76
HDAC4-211ENST00000494800 MCM7P33993 719 aa19.78■□□□□ 0.76
HDAC4-211ENST00000494800 NFX1Q12986 1120 aaKnown RBP19.78■□□□□ 0.76
HDAC4-211ENST00000494800 KIZQ2M2Z5 673 aa19.78■□□□□ 0.76
HDAC4-211ENST00000494800 OTUD6AQ7L8S5 288 aa19.78■□□□□ 0.76
HDAC4-211ENST00000494800 LRRC71Q8N4P6 559 aa19.78■□□□□ 0.76
HDAC4-211ENST00000494800 ARNTL2Q8WYA1 636 aa19.78■□□□□ 0.76
HDAC4-211ENST00000494800 SCLT1Q96NL6 688 aa19.78■□□□□ 0.76
HDAC4-211ENST00000494800 ZSWIM4Q9H7M6 989 aa19.78■□□□□ 0.76
HDAC4-211ENST00000494800 TTC12Q9H892 705 aaPredicted RBP19.78■□□□□ 0.76
HDAC4-211ENST00000494800 PPME1Q9Y570 386 aa19.78■□□□□ 0.76
HDAC4-211ENST00000494800 GBF1Q92538 1859 aa19.77■□□□□ 0.76
HDAC4-211ENST00000494800 ENPP3O14638 875 aa19.77■□□□□ 0.76
HDAC4-211ENST00000494800 TXKP42681 527 aa19.77■□□□□ 0.76
HDAC4-211ENST00000494800 TRAPPC10P48553 1259 aa19.77■□□□□ 0.76
HDAC4-211ENST00000494800 HTRA4P83105 476 aaPredicted RBP19.77■□□□□ 0.76
HDAC4-211ENST00000494800 TARBP2Q15633 366 aaKnown RBP19.77■□□□□ 0.76
HDAC4-211ENST00000494800 SLC17A8Q8NDX2 589 aa19.77■□□□□ 0.76
HDAC4-211ENST00000494800 NEK9Q8TD19 979 aa19.77■□□□□ 0.76
HDAC4-211ENST00000494800 SLC7A3Q8WY07 619 aa19.77■□□□□ 0.76
HDAC4-211ENST00000494800 TGS1Q96RS0 853 aaKnown RBP19.77■□□□□ 0.76
HDAC4-211ENST00000494800 OSMRQ99650 979 aa19.77■□□□□ 0.76
HDAC4-211ENST00000494800 LXNQ9BS40 222 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms