RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 FOXD4L1Q9NU39 408 aa17.88■□□□□ 0.45
LIME1-209ENST00000494776 TRPV2Q9Y5S1 764 aa17.88■□□□□ 0.45
LIME1-209ENST00000494776 ABHD14A-ACY1A0A1B0GW23 586 aa17.87■□□□□ 0.45
LIME1-209ENST00000494776 EFCAB14O75071 495 aa17.87■□□□□ 0.45
LIME1-209ENST00000494776 GHRP10912 638 aa17.87■□□□□ 0.45
LIME1-209ENST00000494776 CYP4A11Q02928 519 aa17.87■□□□□ 0.45
LIME1-209ENST00000494776 SPIRE1Q08AE8 756 aa17.87■□□□□ 0.45
LIME1-209ENST00000494776 TBC1D8BQ0IIM8 1120 aa17.87■□□□□ 0.45
LIME1-209ENST00000494776 NBR1Q14596 966 aa17.87■□□□□ 0.45
LIME1-209ENST00000494776 PLEKHG4Q58EX7 1191 aa17.87■□□□□ 0.45
LIME1-209ENST00000494776 FAM109BQ6ICB4 259 aaPredicted RBP17.87■□□□□ 0.45
LIME1-209ENST00000494776 EFCAB12Q6NXP0 572 aa17.87■□□□□ 0.45
LIME1-209ENST00000494776 TPH2Q8IWU9 490 aa17.87■□□□□ 0.45
LIME1-209ENST00000494776 SNX21Q969T3 373 aa17.87■□□□□ 0.45
LIME1-209ENST00000494776 DYDC2Q96IM9 177 aa17.87■□□□□ 0.45
LIME1-209ENST00000494776 MAP7D2Q96T17 732 aa17.87■□□□□ 0.45
LIME1-209ENST00000494776 SLC9A7Q96T83 725 aa17.87■□□□□ 0.45
LIME1-209ENST00000494776 LXNQ9BS40 222 aa17.87■□□□□ 0.45
LIME1-209ENST00000494776 NIFKQ9BYG3 293 aaKnown RBP17.87■□□□□ 0.45
LIME1-209ENST00000494776 SUGCTQ9HAC7 445 aa17.87■□□□□ 0.45
LIME1-209ENST00000494776 RGL1Q9NZL6 768 aa17.87■□□□□ 0.45
LIME1-209ENST00000494776 MSRAQ9UJ68 235 aa17.87■□□□□ 0.45
LIME1-209ENST00000494776 GINS2Q9Y248 185 aa17.87■□□□□ 0.45
LIME1-209ENST00000494776 VPS37CA5D8V6 355 aaPredicted RBP17.86■□□□□ 0.45
LIME1-209ENST00000494776 TECP42680 631 aa17.86■□□□□ 0.45
LIME1-209ENST00000494776 MGAT3Q09327 533 aa17.86■□□□□ 0.45
LIME1-209ENST00000494776 CTTNQ14247 550 aaKnown RBP17.86■□□□□ 0.45
LIME1-209ENST00000494776 TMEM266Q2M3C6 531 aa17.86■□□□□ 0.45
LIME1-209ENST00000494776 RILPL1Q5EBL4 403 aa17.86■□□□□ 0.45
LIME1-209ENST00000494776 ZNF697Q5TEC3 545 aa17.86■□□□□ 0.45
LIME1-209ENST00000494776 OTUD6AQ7L8S5 288 aa17.86■□□□□ 0.45
LIME1-209ENST00000494776 KIAA0319LQ8IZA0 1049 aa17.86■□□□□ 0.45
LIME1-209ENST00000494776 DEFB123Q8N688 67 aa17.86■□□□□ 0.45
LIME1-209ENST00000494776 APBB2Q92870 758 aa17.86■□□□□ 0.45
LIME1-209ENST00000494776 INTS4Q96HW7 963 aaKnown RBP17.86■□□□□ 0.45
LIME1-209ENST00000494776 EIF2AK1Q9BQI3 630 aaKnown RBP17.86■□□□□ 0.45
LIME1-209ENST00000494776 SH2D3AQ9BRG2 576 aa17.86■□□□□ 0.45
LIME1-209ENST00000494776 IFIH1Q9BYX4 1025 aaKnown RBP17.86■□□□□ 0.45
LIME1-209ENST00000494776 CELF4Q9BZC1 486 aaKnown RBP17.86■□□□□ 0.45
LIME1-209ENST00000494776 ZSWIM4Q9H7M6 989 aa17.86■□□□□ 0.45
LIME1-209ENST00000494776 AKT3Q9Y243 479 aa17.86■□□□□ 0.45
LIME1-209ENST00000494776 TMEM150BA6NC51 233 aa17.85■□□□□ 0.45
LIME1-209ENST00000494776 HSP90AA1P07900 732 aaKnown RBP17.85■□□□□ 0.45
LIME1-209ENST00000494776 DNAJB2P25686 324 aa17.85■□□□□ 0.45
LIME1-209ENST00000494776 TOB1P50616 345 aaPredicted RBP17.85■□□□□ 0.45
LIME1-209ENST00000494776 CLCN3P51790 818 aa17.85■□□□□ 0.45
LIME1-209ENST00000494776 WDR5P61964 334 aaKnown RBP17.85■□□□□ 0.45
LIME1-209ENST00000494776 LPIN1Q14693 890 aa17.85■□□□□ 0.45
LIME1-209ENST00000494776 RAB30Q15771 203 aa17.85■□□□□ 0.45
LIME1-209ENST00000494776 SZT2Q5T011 3432 aa17.85■□□□□ 0.45
LIME1-209ENST00000494776 PLA2G4FQ68DD2 849 aa17.85■□□□□ 0.45
LIME1-209ENST00000494776 C4orf19Q8IY42 314 aa17.85■□□□□ 0.45
LIME1-209ENST00000494776 LRRC71Q8N4P6 559 aa17.85■□□□□ 0.45
LIME1-209ENST00000494776 PHOSPHO2Q8TCD6 241 aa17.85■□□□□ 0.45
LIME1-209ENST00000494776 NEK9Q8TD19 979 aa17.85■□□□□ 0.45
LIME1-209ENST00000494776 PPP1R16BQ96T49 567 aa17.85■□□□□ 0.45
LIME1-209ENST00000494776 OSBPL7Q9BZF2 842 aa17.85■□□□□ 0.45
LIME1-209ENST00000494776 PCDHB6Q9Y5E3 794 aa17.85■□□□□ 0.45
LIME1-209ENST00000494776 LAMA3Q16787 3333 aa17.85■□□□□ 0.45
LIME1-209ENST00000494776 POTEMA6NI47 508 aa17.84■□□□□ 0.45
LIME1-209ENST00000494776 SLITRK3O94933 977 aa17.84■□□□□ 0.45
LIME1-209ENST00000494776 STBD1O95210 358 aa17.84■□□□□ 0.45
LIME1-209ENST00000494776 VTNP04004 478 aa17.84■□□□□ 0.45
LIME1-209ENST00000494776 YWHABP31946 246 aaKnown RBP17.84■□□□□ 0.45
LIME1-209ENST00000494776 PBX2P40425 430 aa17.84■□□□□ 0.45
LIME1-209ENST00000494776 DNM2P50570 870 aa17.84■□□□□ 0.45
LIME1-209ENST00000494776 RABGGTBP53611 331 aa17.84■□□□□ 0.45
LIME1-209ENST00000494776 PTGDRQ13258 359 aa17.84■□□□□ 0.45
LIME1-209ENST00000494776 TARBP2Q15633 366 aaKnown RBP17.84■□□□□ 0.45
LIME1-209ENST00000494776 TCTN1Q2MV58 587 aa17.84■□□□□ 0.45
LIME1-209ENST00000494776 FBXO47Q5MNV8 452 aa17.84■□□□□ 0.45
LIME1-209ENST00000494776 TSHZ1Q6ZSZ6 1077 aa17.84■□□□□ 0.45
LIME1-209ENST00000494776 ANO5Q75V66 913 aa17.84■□□□□ 0.45
LIME1-209ENST00000494776 USP38Q8NB14 1042 aa17.84■□□□□ 0.45
LIME1-209ENST00000494776 ERMNQ8TAM6 284 aa17.84■□□□□ 0.45
LIME1-209ENST00000494776 TIFAQ96CG3 184 aa17.84■□□□□ 0.45
LIME1-209ENST00000494776 CEP170P1Q96L14 293 aa17.84■□□□□ 0.45
LIME1-209ENST00000494776 FAM161BQ96MY7 647 aa17.84■□□□□ 0.45
LIME1-209ENST00000494776 ZBED2Q9BTP6 218 aa17.84■□□□□ 0.45
LIME1-209ENST00000494776 PBX4Q9BYU1 374 aa17.84■□□□□ 0.45
LIME1-209ENST00000494776 CYP26B1Q9NR63 512 aa17.84■□□□□ 0.45
LIME1-209ENST00000494776 WRAP73Q9P2S5 460 aaPredicted RBP17.84■□□□□ 0.45
LIME1-209ENST00000494776 RBAK-RBAKDNI3L0D1 243 aa17.83■□□□□ 0.44
LIME1-209ENST00000494776 AMHP03971 560 aa17.83■□□□□ 0.44
LIME1-209ENST00000494776 KIZQ2M2Z5 673 aa17.83■□□□□ 0.44
LIME1-209ENST00000494776 Q7L0L9 218 aa17.83■□□□□ 0.44
LIME1-209ENST00000494776 EXOC8Q8IYI6 725 aa17.83■□□□□ 0.44
LIME1-209ENST00000494776 CCDC43Q96MW1 224 aaKnown RBP17.83■□□□□ 0.44
LIME1-209ENST00000494776 SCLT1Q96NL6 688 aa17.83■□□□□ 0.44
LIME1-209ENST00000494776 JPH2Q9BR39 696 aaPredicted RBP17.83■□□□□ 0.44
LIME1-209ENST00000494776 SQORQ9Y6N5 450 aa17.83■□□□□ 0.44
LIME1-209ENST00000494776 KDM3AQ9Y4C1 1321 aa17.82■□□□□ 0.44
LIME1-209ENST00000494776 LAD1O00515 517 aa17.82■□□□□ 0.44
LIME1-209ENST00000494776 CD52P31358 61 aa17.82■□□□□ 0.44
LIME1-209ENST00000494776 POLGP54098 1239 aaPredicted RBP17.82■□□□□ 0.44
LIME1-209ENST00000494776 NPEPPSP55786 919 aa17.82■□□□□ 0.44
LIME1-209ENST00000494776 DEFB103AP81534 67 aa17.82■□□□□ 0.44
LIME1-209ENST00000494776 PAK2Q13177 524 aa17.82■□□□□ 0.44
LIME1-209ENST00000494776 XKR9Q5GH70 373 aa17.82■□□□□ 0.44
LIME1-209ENST00000494776 BRAPQ7Z569 592 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms