RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.21□□□□□ -1.58
PRKD3-210ENST00000494667 TUBGCP2Q9BSJ2 902 aa5.21□□□□□ -1.58
PRKD3-210ENST00000494667 YIPF2Q9BWQ6 316 aa5.21□□□□□ -1.58
PRKD3-210ENST00000494667 DHX36Q9H2U1 1008 aaKnown RBP5.21□□□□□ -1.58
PRKD3-210ENST00000494667 INTS9Q9NV88 658 aaKnown RBP5.21□□□□□ -1.58
PRKD3-210ENST00000494667 USP40Q9NVE5 1235 aa5.21□□□□□ -1.58
PRKD3-210ENST00000494667 SPATA7Q9P0W8 599 aa5.21□□□□□ -1.58
PRKD3-210ENST00000494667 KIAA1522Q9P206 1035 aaPredicted RBP5.21□□□□□ -1.58
PRKD3-210ENST00000494667 INTUQ9ULD6 942 aa5.21□□□□□ -1.58
PRKD3-210ENST00000494667 TFR2Q9UP52 801 aa5.21□□□□□ -1.58
PRKD3-210ENST00000494667 ATP8A1Q9Y2Q0 1164 aa5.21□□□□□ -1.58
PRKD3-210ENST00000494667 TRIM75PA6NK02 468 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 ITGA2BP08514 1039 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 MAGEA10P43363 369 aaPredicted RBP5.2□□□□□ -1.58
PRKD3-210ENST00000494667 BPIFB4P59827 614 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 XIAPP98170 497 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 TFCP2Q12800 502 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 GCKRQ14397 625 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 PDIA6Q15084 440 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 KRT71Q3SY84 523 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 FAM133BQ5BKY9 247 aaKnown RBP5.2□□□□□ -1.58
PRKD3-210ENST00000494667 USP49Q70CQ1 688 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 IFT81Q8WYA0 676 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 APPBP2Q92624 585 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 SLC7A6OSQ96CW6 309 aaPredicted RBP5.2□□□□□ -1.58
PRKD3-210ENST00000494667 AIFM3Q96NN9 605 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 TUBGCP5Q96RT8 1024 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 DBNDD2Q9BQY9 259 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 CENPKQ9BS16 269 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 PHF20Q9BVI0 1012 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 ZMYND8Q9ULU4 1186 aaPredicted RBP5.2□□□□□ -1.58
PRKD3-210ENST00000494667 UMODL1Q5DID0 1318 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 UBR2Q8IWV8 1755 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 ZBTB43O43298 467 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 KIF4AO95239 1232 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 FGAP02671 866 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 CYP1A1P04798 512 aaPredicted RBP5.2□□□□□ -1.58
PRKD3-210ENST00000494667 CCNE1P24864 410 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 CDC25CP30307 473 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 LONP1P36776 959 aaKnown RBP5.2□□□□□ -1.58
PRKD3-210ENST00000494667 SCNN1BP51168 640 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 OXCT1P55809 520 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 MCL1Q07820 350 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 CGB2Q6NT52 195 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 BORAQ6PGQ7 559 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 CEP128Q6ZU80 1094 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 OSBP2Q969R2 916 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 ELAC2Q9BQ52 826 aaKnown RBP5.2□□□□□ -1.58
PRKD3-210ENST00000494667 RNF26Q9BY78 433 aaPredicted RBP5.2□□□□□ -1.58
PRKD3-210ENST00000494667 SUCLA2Q9P2R7 463 aaPredicted RBP5.2□□□□□ -1.58
PRKD3-210ENST00000494667 STX18Q9P2W9 335 aaKnown RBP5.2□□□□□ -1.58
PRKD3-210ENST00000494667 LGALS13Q9UHV8 139 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 PNMA2Q9UL42 364 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 PAPPAQ13219 1627 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 UBR1Q8IWV7 1749 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 PGRMC1O00264 195 aaKnown RBP5.2□□□□□ -1.58
PRKD3-210ENST00000494667 CEP104O60308 925 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 NPM3O75607 178 aaKnown RBP5.2□□□□□ -1.58
PRKD3-210ENST00000494667 EIF4A3P38919 411 aaKnown RBP5.2□□□□□ -1.58
PRKD3-210ENST00000494667 MAGEA1P43355 309 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 RASSF2P50749 326 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 GSTM4Q03013 218 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 MGAT5Q09328 741 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 CBX3Q13185 183 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 DHX34Q14147 1143 aaKnown RBP5.2□□□□□ -1.58
PRKD3-210ENST00000494667 DHRS4L2Q6PKH6 230 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 NCCRP1Q6ZVX7 275 aaPredicted RBP5.2□□□□□ -1.58
PRKD3-210ENST00000494667 LRP10Q7Z4F1 713 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 SYCP3Q8IZU3 236 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 PIP4K2CQ8TBX8 421 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 NEK9Q8TD19 979 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 MAGEB18Q96M61 343 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 CORO1BQ9BR76 489 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 TUBB6Q9BUF5 446 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 RMI1Q9H9A7 625 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 PLK2Q9NYY3 685 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 VPS54Q9P1Q0 977 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 FRMPD4Q14CM0 1322 aa5.2□□□□□ -1.58
PRKD3-210ENST00000494667 RGPD2P0DJD1 1756 aa5.19□□□□□ -1.58
PRKD3-210ENST00000494667 KANSL1LA0AUZ9 987 aa5.19□□□□□ -1.58
PRKD3-210ENST00000494667 ESYT3A0FGR9 886 aa5.19□□□□□ -1.58
PRKD3-210ENST00000494667 GOLGA8AA7E2F4 631 aa5.19□□□□□ -1.58
PRKD3-210ENST00000494667 A8MXQ7 604 aa5.19□□□□□ -1.58
PRKD3-210ENST00000494667 BTBD18B2RXH4 712 aa5.19□□□□□ -1.58
PRKD3-210ENST00000494667 PSMA7O14818 248 aa5.19□□□□□ -1.58
PRKD3-210ENST00000494667 SERPING1P05155 500 aa5.19□□□□□ -1.58
PRKD3-210ENST00000494667 ALAS1P13196 640 aa5.19□□□□□ -1.58
PRKD3-210ENST00000494667 TRIM21P19474 475 aaKnown RBP5.19□□□□□ -1.58
PRKD3-210ENST00000494667 POLGP54098 1239 aaPredicted RBP5.19□□□□□ -1.58
PRKD3-210ENST00000494667 MAP3K10Q02779 954 aa5.19□□□□□ -1.58
PRKD3-210ENST00000494667 MOGSQ13724 837 aa5.19□□□□□ -1.58
PRKD3-210ENST00000494667 TCEAL1Q15170 157 aa5.19□□□□□ -1.58
PRKD3-210ENST00000494667 ATG9AQ7Z3C6 839 aa5.19□□□□□ -1.58
PRKD3-210ENST00000494667 RALYLQ86SE5 291 aaKnown RBP5.19□□□□□ -1.58
PRKD3-210ENST00000494667 RAB11FIP4Q86YS3 637 aa5.19□□□□□ -1.58
PRKD3-210ENST00000494667 C7orf43Q8WVR3 580 aa5.19□□□□□ -1.58
PRKD3-210ENST00000494667 MS4A14Q96JA4 679 aa5.19□□□□□ -1.58
PRKD3-210ENST00000494667 CGREF1Q99674 301 aa5.19□□□□□ -1.58
PRKD3-210ENST00000494667 METTL22Q9BUU2 404 aaPredicted RBP5.19□□□□□ -1.58
PRKD3-210ENST00000494667 UNC45AQ9H3U1 944 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms