RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 DUPD1Q68J44 220 aa11□□□□□ -0.65
LINC00488-201ENST00000494582 EXOC3L1Q86VI1 746 aa11□□□□□ -0.65
LINC00488-201ENST00000494582 LMNTD2Q8IXW0 634 aa11□□□□□ -0.65
LINC00488-201ENST00000494582 FBXO25Q8TCJ0 367 aa11□□□□□ -0.65
LINC00488-201ENST00000494582 SDR42E1Q8WUS8 393 aa11□□□□□ -0.65
LINC00488-201ENST00000494582 IFT74Q96LB3 600 aa11□□□□□ -0.65
LINC00488-201ENST00000494582 ANKRD27Q96NW4 1050 aa11□□□□□ -0.65
LINC00488-201ENST00000494582 ZSCAN10Q96SZ4 725 aaPredicted RBP11□□□□□ -0.65
LINC00488-201ENST00000494582 C7orf25Q9BPX7 421 aa11□□□□□ -0.65
LINC00488-201ENST00000494582 TANGO6Q9C0B7 1094 aa11□□□□□ -0.65
LINC00488-201ENST00000494582 TMX4Q9H1E5 349 aaPredicted RBP11□□□□□ -0.65
LINC00488-201ENST00000494582 PHF8Q9UPP1 1060 aa11□□□□□ -0.65
LINC00488-201ENST00000494582 STXBP5LQ9Y2K9 1186 aa11□□□□□ -0.65
LINC00488-201ENST00000494582 SNX24Q9Y343 169 aa11□□□□□ -0.65
LINC00488-201ENST00000494582 UTP11Q9Y3A2 253 aaKnown RBP11□□□□□ -0.65
LINC00488-201ENST00000494582 SIGLEC16A6NMB1 481 aa10.99□□□□□ -0.65
LINC00488-201ENST00000494582 CCDC188H7C350 402 aa10.99□□□□□ -0.65
LINC00488-201ENST00000494582 UNC5CO95185 931 aa10.99□□□□□ -0.65
LINC00488-201ENST00000494582 AFPP02771 609 aaKnown RBP10.99□□□□□ -0.65
LINC00488-201ENST00000494582 GCP02774 474 aa10.99□□□□□ -0.65
LINC00488-201ENST00000494582 MYL1P05976 194 aa10.99□□□□□ -0.65
LINC00488-201ENST00000494582 SCG2P13521 617 aa10.99□□□□□ -0.65
LINC00488-201ENST00000494582 RASA1P20936 1047 aa10.99□□□□□ -0.65
LINC00488-201ENST00000494582 FGFR4P22455 802 aa10.99□□□□□ -0.65
LINC00488-201ENST00000494582 ARID4AP29374 1257 aaPredicted RBP10.99□□□□□ -0.65
LINC00488-201ENST00000494582 DCAF12L1Q5VU92 463 aa10.99□□□□□ -0.65
LINC00488-201ENST00000494582 DENND2CQ68D51 928 aa10.99□□□□□ -0.65
LINC00488-201ENST00000494582 MIGA2Q7L4E1 593 aa10.99□□□□□ -0.65
LINC00488-201ENST00000494582 DAAM2Q86T65 1068 aa10.99□□□□□ -0.65
LINC00488-201ENST00000494582 HELBQ8NG08 1087 aaPredicted RBP10.99□□□□□ -0.65
LINC00488-201ENST00000494582 TPCN2Q8NHX9 752 aa10.99□□□□□ -0.65
LINC00488-201ENST00000494582 PIGOQ8TEQ8 1089 aa10.99□□□□□ -0.65
LINC00488-201ENST00000494582 ZNF512BQ96KM6 892 aaPredicted RBP10.99□□□□□ -0.65
LINC00488-201ENST00000494582 ARL2BPQ9Y2Y0 163 aa10.99□□□□□ -0.65
LINC00488-201ENST00000494582 PCDH11XQ9BZA7 1347 aa10.99□□□□□ -0.65
LINC00488-201ENST00000494582 PHRF1Q9P1Y6 1649 aaKnown RBP10.99□□□□□ -0.65
LINC00488-201ENST00000494582 GOLGA6L10A0A0M3HER8 536 aa10.99□□□□□ -0.65
LINC00488-201ENST00000494582 ENTPD5O75356 428 aa10.99□□□□□ -0.65
LINC00488-201ENST00000494582 FLOT1O75955 427 aa10.99□□□□□ -0.65
LINC00488-201ENST00000494582 AGTP01019 485 aa10.99□□□□□ -0.65
LINC00488-201ENST00000494582 ACADSP16219 412 aa10.99□□□□□ -0.65
LINC00488-201ENST00000494582 PTK2Q05397 1052 aa10.99□□□□□ -0.65
LINC00488-201ENST00000494582 IFIT5Q13325 482 aaKnown RBP10.99□□□□□ -0.65
LINC00488-201ENST00000494582 CMPK2Q5EBM0 449 aa10.99□□□□□ -0.65
LINC00488-201ENST00000494582 IFIT1BQ5T764 474 aaKnown RBP10.99□□□□□ -0.65
LINC00488-201ENST00000494582 VSTM1Q6UX27 236 aa10.99□□□□□ -0.65
LINC00488-201ENST00000494582 GIGYF2Q6Y7W6 1299 aaKnown RBP10.99□□□□□ -0.65
LINC00488-201ENST00000494582 LDHAL6AQ6ZMR3 332 aa10.99□□□□□ -0.65
LINC00488-201ENST00000494582 ZNF571Q7Z3V5 609 aaPredicted RBP10.99□□□□□ -0.65
LINC00488-201ENST00000494582 ADGRA1Q86SQ6 560 aa10.99□□□□□ -0.65
LINC00488-201ENST00000494582 COL23A1Q86Y22 540 aaPredicted RBP10.99□□□□□ -0.65
LINC00488-201ENST00000494582 CCNJLQ8IV13 435 aa10.99□□□□□ -0.65
LINC00488-201ENST00000494582 GDAP1Q8TB36 358 aa10.99□□□□□ -0.65
LINC00488-201ENST00000494582 FBF1Q8TES7 1133 aa10.99□□□□□ -0.65
LINC00488-201ENST00000494582 NUDCD1Q96RS6 583 aa10.99□□□□□ -0.65
LINC00488-201ENST00000494582 GREM2Q9H772 168 aa10.99□□□□□ -0.65
LINC00488-201ENST00000494582 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.99□□□□□ -0.65
LINC00488-201ENST00000494582 KIF1AQ12756 1690 aa10.99□□□□□ -0.65
LINC00488-201ENST00000494582 CCDC169A6NNP5 214 aa10.98□□□□□ -0.65
LINC00488-201ENST00000494582 FGGP02679 453 aa10.98□□□□□ -0.65
LINC00488-201ENST00000494582 GBP1P32455 592 aa10.98□□□□□ -0.65
LINC00488-201ENST00000494582 KLHL30Q0D2K2 578 aa10.98□□□□□ -0.65
LINC00488-201ENST00000494582 RASGRF1Q13972 1273 aa10.98□□□□□ -0.65
LINC00488-201ENST00000494582 INF2Q27J81 1249 aa10.98□□□□□ -0.65
LINC00488-201ENST00000494582 CATIPQ7Z7H3 387 aa10.98□□□□□ -0.65
LINC00488-201ENST00000494582 CABP7Q86V35 215 aa10.98□□□□□ -0.65
LINC00488-201ENST00000494582 GBP7Q8N8V2 638 aaPredicted RBP10.98□□□□□ -0.65
LINC00488-201ENST00000494582 MAIP1Q8WWC4 291 aa10.98□□□□□ -0.65
LINC00488-201ENST00000494582 DNAJC9Q8WXX5 260 aa10.98□□□□□ -0.65
LINC00488-201ENST00000494582 LBHD1Q9BQE6 289 aaPredicted RBP10.98□□□□□ -0.65
LINC00488-201ENST00000494582 CAMTA1Q9Y6Y1 1673 aa10.98□□□□□ -0.65
LINC00488-201ENST00000494582 CSF1RP07333 972 aa10.98□□□□□ -0.65
LINC00488-201ENST00000494582 SPATA31D3P0C874 917 aa10.98□□□□□ -0.65
LINC00488-201ENST00000494582 PABPC1LQ4VXU2 614 aaKnown RBP10.98□□□□□ -0.65
LINC00488-201ENST00000494582 LRRC23Q53EV4 343 aaPredicted RBP10.98□□□□□ -0.65
LINC00488-201ENST00000494582 SPDYCQ5MJ68 293 aa10.98□□□□□ -0.65
LINC00488-201ENST00000494582 SOGA3Q5TF21 947 aa10.98□□□□□ -0.65
LINC00488-201ENST00000494582 SPATA31D4Q6ZUB0 917 aa10.98□□□□□ -0.65
LINC00488-201ENST00000494582 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.98□□□□□ -0.65
LINC00488-201ENST00000494582 BLIDQ8IZY5 108 aa10.98□□□□□ -0.65
LINC00488-201ENST00000494582 ENDOVQ8N8Q3 282 aaKnown RBP10.98□□□□□ -0.65
LINC00488-201ENST00000494582 KCNH5Q8NCM2 988 aa10.98□□□□□ -0.65
LINC00488-201ENST00000494582 SYN2Q92777 582 aaPredicted RBP10.98□□□□□ -0.65
LINC00488-201ENST00000494582 BICD1Q96G01 975 aa10.98□□□□□ -0.65
LINC00488-201ENST00000494582 ZNF333Q96JL9 665 aa10.98□□□□□ -0.65
LINC00488-201ENST00000494582 FGD4Q96M96 766 aa10.98□□□□□ -0.65
LINC00488-201ENST00000494582 MTA3Q9BTC8 594 aa10.98□□□□□ -0.65
LINC00488-201ENST00000494582 MMTAG2Q9BU76 263 aaKnown RBP10.98□□□□□ -0.65
LINC00488-201ENST00000494582 EDEM3Q9BZQ6 932 aa10.98□□□□□ -0.65
LINC00488-201ENST00000494582 MYLK2Q9H1R3 596 aa10.98□□□□□ -0.65
LINC00488-201ENST00000494582 NMRK1Q9NWW6 199 aa10.98□□□□□ -0.65
LINC00488-201ENST00000494582 GRHL1Q9NZI5 618 aa10.98□□□□□ -0.65
LINC00488-201ENST00000494582 ABCF2Q9UG63 623 aa10.98□□□□□ -0.65
LINC00488-201ENST00000494582 TMEM120BA0PK00 339 aa10.97□□□□□ -0.65
LINC00488-201ENST00000494582 MYMKA6NI61 221 aa10.97□□□□□ -0.65
LINC00488-201ENST00000494582 KIAA0391O15091 583 aaKnown RBP10.97□□□□□ -0.65
LINC00488-201ENST00000494582 CYP1A1P04798 512 aaPredicted RBP10.97□□□□□ -0.65
LINC00488-201ENST00000494582 KCNA6P17658 529 aa10.97□□□□□ -0.65
LINC00488-201ENST00000494582 TARSP26639 723 aaKnown RBP10.97□□□□□ -0.65
LINC00488-201ENST00000494582 MYBPC3Q14896 1274 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms