RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 STRA6Q9BX79 667 aa18.23■□□□□ 0.51
ATG4B-225ENST00000494465 IKZF4Q9H2S9 585 aa18.23■□□□□ 0.51
ATG4B-225ENST00000494465 R3HDMLQ9H3Y0 253 aa18.23■□□□□ 0.51
ATG4B-225ENST00000494465 NFASCO94856 1347 aa18.23■□□□□ 0.51
ATG4B-225ENST00000494465 CALUO43852 315 aaPredicted RBP18.22■□□□□ 0.51
ATG4B-225ENST00000494465 GTF2F1P35269 517 aaKnown RBP eCLIP18.22■□□□□ 0.512e-8■■■■■ 34.1
ATG4B-225ENST00000494465 ETF1P62495 437 aaKnown RBP18.22■□□□□ 0.51
ATG4B-225ENST00000494465 HERVK_113P62684 666 aa18.22■□□□□ 0.51
ATG4B-225ENST00000494465 IRX3P78415 501 aaPredicted RBP18.22■□□□□ 0.51
ATG4B-225ENST00000494465 ZBED6P86452 979 aa18.22■□□□□ 0.51
ATG4B-225ENST00000494465 KCNMA1Q12791 1236 aa18.22■□□□□ 0.51
ATG4B-225ENST00000494465 MEA1Q16626 185 aa18.22■□□□□ 0.51
ATG4B-225ENST00000494465 ODR4Q5SWX8 454 aa18.22■□□□□ 0.51
ATG4B-225ENST00000494465 LDLRAD1Q5T700 205 aa18.22■□□□□ 0.51
ATG4B-225ENST00000494465 FAM178BQ8IXR5 827 aa18.22■□□□□ 0.51
ATG4B-225ENST00000494465 ANKRD35Q8N283 1001 aa18.22■□□□□ 0.51
ATG4B-225ENST00000494465 FBXO40Q9UH90 709 aa18.22■□□□□ 0.51
ATG4B-225ENST00000494465 ARID2Q68CP9 1835 aa18.22■□□□□ 0.51
ATG4B-225ENST00000494465 PFASO15067 1338 aa18.22■□□□□ 0.51
ATG4B-225ENST00000494465 LRRC37A2A6NM11 1700 aa18.22■□□□□ 0.51
ATG4B-225ENST00000494465 FANCGO15287 622 aa18.22■□□□□ 0.51
ATG4B-225ENST00000494465 PPP1R37O75864 691 aa18.22■□□□□ 0.51
ATG4B-225ENST00000494465 CCDC175P0C221 793 aa18.22■□□□□ 0.51
ATG4B-225ENST00000494465 GJA5P36382 358 aa18.22■□□□□ 0.51
ATG4B-225ENST00000494465 SYT10Q6XYQ8 523 aa18.22■□□□□ 0.51
ATG4B-225ENST00000494465 PCMTD1Q96MG8 357 aaPredicted RBP18.22■□□□□ 0.51
ATG4B-225ENST00000494465 SH2D3AQ9BRG2 576 aa18.22■□□□□ 0.51
ATG4B-225ENST00000494465 PCDHA10Q9Y5I2 948 aa18.22■□□□□ 0.51
ATG4B-225ENST00000494465 UBE4BO95155 1302 aa18.21■□□□□ 0.51
ATG4B-225ENST00000494465 A0A0U1RQJ8 604 aa18.21■□□□□ 0.51
ATG4B-225ENST00000494465 IQCA1LA6NCM1 817 aa18.21■□□□□ 0.51
ATG4B-225ENST00000494465 GOLGA6L9A6NEM1 432 aa18.21■□□□□ 0.51
ATG4B-225ENST00000494465 BACH1O14867 736 aa18.21■□□□□ 0.51
ATG4B-225ENST00000494465 NR3C1P04150 777 aa18.21■□□□□ 0.51
ATG4B-225ENST00000494465 TUBB4AP04350 444 aa18.21■□□□□ 0.51
ATG4B-225ENST00000494465 KSR1Q8IVT5 923 aa18.21■□□□□ 0.51
ATG4B-225ENST00000494465 KIF18AQ8NI77 898 aa18.21■□□□□ 0.51
ATG4B-225ENST00000494465 ATRIPQ8WXE1 791 aa18.21■□□□□ 0.51
ATG4B-225ENST00000494465 CDHR1Q96JP9 859 aa18.21■□□□□ 0.51
ATG4B-225ENST00000494465 AKAP3O75969 853 aa18.2■□□□□ 0.5
ATG4B-225ENST00000494465 SP2Q02086 613 aa18.2■□□□□ 0.5
ATG4B-225ENST00000494465 NFIL3Q16649 462 aa18.2■□□□□ 0.5
ATG4B-225ENST00000494465 UTP14CQ5TAP6 766 aaKnown RBP18.2■□□□□ 0.5
ATG4B-225ENST00000494465 GPAT2Q6NUI2 795 aa18.2■□□□□ 0.5
ATG4B-225ENST00000494465 ARMC9Q7Z3E5 817 aa18.2■□□□□ 0.5
ATG4B-225ENST00000494465 SMAP1Q8IYB5 467 aaPredicted RBP18.2■□□□□ 0.5
ATG4B-225ENST00000494465 SMCR8Q8TEV9 937 aaPredicted RBP18.2■□□□□ 0.5
ATG4B-225ENST00000494465 IQCDQ96DY2 449 aa18.2■□□□□ 0.5
ATG4B-225ENST00000494465 TXNRD2Q9NNW7 524 aa18.2■□□□□ 0.5
ATG4B-225ENST00000494465 ZNF862O60290 1169 aa18.2■□□□□ 0.5
ATG4B-225ENST00000494465 STBD1O95210 358 aa18.2■□□□□ 0.5
ATG4B-225ENST00000494465 POTEJP0CG39 1038 aa18.2■□□□□ 0.5
ATG4B-225ENST00000494465 ALDH5A1P51649 535 aaPredicted RBP18.2■□□□□ 0.5
ATG4B-225ENST00000494465 GNPTABQ3T906 1256 aa18.2■□□□□ 0.5
ATG4B-225ENST00000494465 ANO5Q75V66 913 aa18.2■□□□□ 0.5
ATG4B-225ENST00000494465 MAEAQ7L5Y9 396 aa18.2■□□□□ 0.5
ATG4B-225ENST00000494465 FRMD5Q7Z6J6 570 aa18.2■□□□□ 0.5
ATG4B-225ENST00000494465 PAGR1Q9BTK6 254 aa18.2■□□□□ 0.5
ATG4B-225ENST00000494465 JPH1Q9HDC5 661 aaPredicted RBP18.2■□□□□ 0.5
ATG4B-225ENST00000494465 FAM207AQ9NSI2 230 aaPredicted RBP18.2■□□□□ 0.5
ATG4B-225ENST00000494465 ANKEF1Q9NU02 776 aa18.2■□□□□ 0.5
ATG4B-225ENST00000494465 TCEAL9Q9UHQ7 104 aa18.2■□□□□ 0.5
ATG4B-225ENST00000494465 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.2■□□□□ 0.5
ATG4B-225ENST00000494465 SOWAHBA6NEL2 793 aa18.19■□□□□ 0.5
ATG4B-225ENST00000494465 USO1O60763 962 aaKnown RBP18.19■□□□□ 0.5
ATG4B-225ENST00000494465 EIF3JO75822 258 aaKnown RBP18.19■□□□□ 0.5
ATG4B-225ENST00000494465 ICAM3P32942 547 aa18.19■□□□□ 0.5
ATG4B-225ENST00000494465 CASP4P49662 377 aa18.19■□□□□ 0.5
ATG4B-225ENST00000494465 STXBP2Q15833 593 aa18.19■□□□□ 0.5
ATG4B-225ENST00000494465 PLA2G4FQ68DD2 849 aa18.19■□□□□ 0.5
ATG4B-225ENST00000494465 PNMA8AQ86V59 439 aaPredicted RBP18.19■□□□□ 0.5
ATG4B-225ENST00000494465 NCAPG2Q86XI2 1143 aa18.19■□□□□ 0.5
ATG4B-225ENST00000494465 ACRBPQ8NEB7 543 aa18.19■□□□□ 0.5
ATG4B-225ENST00000494465 MMRN2Q9H8L6 949 aa18.19■□□□□ 0.5
ATG4B-225ENST00000494465 RBPJLQ9UBG7 517 aa18.19■□□□□ 0.5
ATG4B-225ENST00000494465 FAM184BQ9ULE4 1060 aa18.19■□□□□ 0.5
ATG4B-225ENST00000494465 MYH9P35579 1960 aaKnown RBP18.19■□□□□ 0.5
ATG4B-225ENST00000494465 CLIC2O15247 247 aa18.19■□□□□ 0.5
ATG4B-225ENST00000494465 EDNRBP24530 442 aa18.19■□□□□ 0.5
ATG4B-225ENST00000494465 NPEPPSP55786 919 aa18.19■□□□□ 0.5
ATG4B-225ENST00000494465 GABBR1Q9UBS5 961 aa18.19■□□□□ 0.5
ATG4B-225ENST00000494465 SLC9A2Q9UBY0 812 aa18.19■□□□□ 0.5
ATG4B-225ENST00000494465 HNRNPH3P31942 346 aaKnown RBP18.18■□□□□ 0.5
ATG4B-225ENST00000494465 ABHD15Q6UXT9 468 aa18.18■□□□□ 0.5
ATG4B-225ENST00000494465 FAM133AQ8N9E0 248 aa18.18■□□□□ 0.5
ATG4B-225ENST00000494465 BORCS6Q96GS4 357 aa18.18■□□□□ 0.5
ATG4B-225ENST00000494465 PHLPP2Q6ZVD8 1323 aa18.18■□□□□ 0.5
ATG4B-225ENST00000494465 SLC16A3O15427 465 aaKnown RBP18.18■□□□□ 0.5
ATG4B-225ENST00000494465 GRIN3BO60391 1043 aa18.18■□□□□ 0.5
ATG4B-225ENST00000494465 NOL4O94818 638 aa18.18■□□□□ 0.5
ATG4B-225ENST00000494465 MAPTP10636 758 aaKnown RBP18.18■□□□□ 0.5
ATG4B-225ENST00000494465 RPL13P26373 211 aaKnown RBP18.18■□□□□ 0.5
ATG4B-225ENST00000494465 ACTR2P61160 394 aa18.18■□□□□ 0.5
ATG4B-225ENST00000494465 KCNH2Q12809 1159 aa18.18■□□□□ 0.5
ATG4B-225ENST00000494465 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.18■□□□□ 0.5
ATG4B-225ENST00000494465 FASTKD5Q7L8L6 764 aaKnown RBP18.18■□□□□ 0.5
ATG4B-225ENST00000494465 BAP1Q92560 729 aa18.18■□□□□ 0.5
ATG4B-225ENST00000494465 ARMCX3Q9UH62 379 aaPredicted RBP18.18■□□□□ 0.5
ATG4B-225ENST00000494465 REXO2Q9Y3B8 237 aaKnown RBP18.18■□□□□ 0.5
ATG4B-225ENST00000494465 PCDHB13Q9Y5F0 798 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms