RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 OGDHLQ9ULD0 1010 aa9.55□□□□□ -0.88
RIF1-211ENST00000494333 NR2E3Q9Y5X4 410 aa9.55□□□□□ -0.88
RIF1-211ENST00000494333 TNRC18O15417 2968 aaPredicted RBP9.55□□□□□ -0.88
RIF1-211ENST00000494333 RANBP6O60518 1105 aaKnown RBP9.54□□□□□ -0.88
RIF1-211ENST00000494333 ADAM11O75078 769 aa9.54□□□□□ -0.88
RIF1-211ENST00000494333 HSPD1P10809 573 aaKnown RBP9.54□□□□□ -0.88
RIF1-211ENST00000494333 SDSP20132 328 aa9.54□□□□□ -0.88
RIF1-211ENST00000494333 KCTD2Q14681 263 aa9.54□□□□□ -0.88
RIF1-211ENST00000494333 ALX1Q15699 326 aa9.54□□□□□ -0.88
RIF1-211ENST00000494333 SLFN13Q68D06 897 aa9.54□□□□□ -0.88
RIF1-211ENST00000494333 ZNF589Q86UQ0 364 aaPredicted RBP9.54□□□□□ -0.88
RIF1-211ENST00000494333 ABRAQ8N0Z2 381 aa9.54□□□□□ -0.88
RIF1-211ENST00000494333 CPXCR1Q8N123 301 aa9.54□□□□□ -0.88
RIF1-211ENST00000494333 REPS2Q8NFH8 660 aa9.54□□□□□ -0.88
RIF1-211ENST00000494333 LENG1Q96BZ8 264 aaPredicted RBP9.54□□□□□ -0.88
RIF1-211ENST00000494333 CHMP4CQ96CF2 233 aa9.54□□□□□ -0.88
RIF1-211ENST00000494333 NACC1Q96RE7 527 aa9.54□□□□□ -0.88
RIF1-211ENST00000494333 MMP19Q99542 508 aa9.54□□□□□ -0.88
RIF1-211ENST00000494333 IL17RBQ9NRM6 502 aa9.54□□□□□ -0.88
RIF1-211ENST00000494333 TOMM22Q9NS69 142 aa9.54□□□□□ -0.88
RIF1-211ENST00000494333 ANAPC4Q9UJX5 808 aa9.54□□□□□ -0.88
RIF1-211ENST00000494333 ZNF214Q9UL59 606 aaPredicted RBP9.54□□□□□ -0.88
RIF1-211ENST00000494333 STX8Q9UNK0 236 aa9.54□□□□□ -0.88
RIF1-211ENST00000494333 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.54□□□□□ -0.88
RIF1-211ENST00000494333 CTDP1Q9Y5B0 961 aaPredicted RBP9.54□□□□□ -0.88
RIF1-211ENST00000494333 MKI67P46013 3256 aaKnown RBP9.54□□□□□ -0.88
RIF1-211ENST00000494333 MYH7P12883 1935 aa9.53□□□□□ -0.88
RIF1-211ENST00000494333 RBM47A0AV96 593 aaKnown RBP9.53□□□□□ -0.88
RIF1-211ENST00000494333 NMT2O60551 498 aa9.53□□□□□ -0.88
RIF1-211ENST00000494333 ZBED4O75132 1171 aa9.53□□□□□ -0.88
RIF1-211ENST00000494333 PGK2P07205 417 aa9.53□□□□□ -0.88
RIF1-211ENST00000494333 BMP3P12645 472 aa9.53□□□□□ -0.88
RIF1-211ENST00000494333 MCCP23508 829 aa9.53□□□□□ -0.88
RIF1-211ENST00000494333 CHRNA4P43681 627 aa9.53□□□□□ -0.88
RIF1-211ENST00000494333 NLRP12P59046 1061 aa9.53□□□□□ -0.88
RIF1-211ENST00000494333 GSTM4Q03013 218 aa9.53□□□□□ -0.88
RIF1-211ENST00000494333 RRP12Q5JTH9 1297 aaKnown RBP9.53□□□□□ -0.88
RIF1-211ENST00000494333 HABP4Q5JVS0 413 aaKnown RBP9.53□□□□□ -0.88
RIF1-211ENST00000494333 PRAMEF19Q5SWL8 479 aa9.53□□□□□ -0.88
RIF1-211ENST00000494333 OLFML2BQ68BL8 750 aa9.53□□□□□ -0.88
RIF1-211ENST00000494333 CD163Q86VB7 1156 aa9.53□□□□□ -0.88
RIF1-211ENST00000494333 GMCL1P1Q8NEA9 526 aa9.53□□□□□ -0.88
RIF1-211ENST00000494333 C11orf49Q9H6J7 331 aa9.53□□□□□ -0.88
RIF1-211ENST00000494333 DDX20Q9UHI6 824 aaKnown RBP9.53□□□□□ -0.88
RIF1-211ENST00000494333 FEM1BQ9UK73 627 aa9.53□□□□□ -0.88
RIF1-211ENST00000494333 ISY1Q9ULR0 285 aaKnown RBP9.53□□□□□ -0.88
RIF1-211ENST00000494333 SYNPO2Q9UMS6 1093 aa9.53□□□□□ -0.88
RIF1-211ENST00000494333 TACC3Q9Y6A5 838 aa9.53□□□□□ -0.88
RIF1-211ENST00000494333 C1QTNF9BB2RNN3 333 aa9.52□□□□□ -0.89
RIF1-211ENST00000494333 C9orf172C9J069 976 aa9.52□□□□□ -0.89
RIF1-211ENST00000494333 TMEM232C9JQI7 657 aa9.52□□□□□ -0.89
RIF1-211ENST00000494333 SORBS3O60504 671 aa9.52□□□□□ -0.89
RIF1-211ENST00000494333 MSCO60682 206 aa9.52□□□□□ -0.89
RIF1-211ENST00000494333 WISP1O95388 367 aa9.52□□□□□ -0.89
RIF1-211ENST00000494333 FGRP09769 529 aa9.52□□□□□ -0.89
RIF1-211ENST00000494333 CYBAP13498 195 aa9.52□□□□□ -0.89
RIF1-211ENST00000494333 COPB2P35606 906 aa9.52□□□□□ -0.89
RIF1-211ENST00000494333 SLC1A4P43007 532 aa9.52□□□□□ -0.89
RIF1-211ENST00000494333 HAND2P61296 217 aa9.52□□□□□ -0.89
RIF1-211ENST00000494333 SNRNP48Q6IEG0 339 aaKnown RBP9.52□□□□□ -0.89
RIF1-211ENST00000494333 CWC27Q6UX04 472 aaKnown RBP9.52□□□□□ -0.89
RIF1-211ENST00000494333 TRPV1Q8NER1 839 aa9.52□□□□□ -0.89
RIF1-211ENST00000494333 MAML3Q96JK9 1138 aa9.52□□□□□ -0.89
RIF1-211ENST00000494333 TEX13BQ9BXU2 312 aa9.52□□□□□ -0.89
RIF1-211ENST00000494333 MRPL18Q9H0U6 180 aaKnown RBP9.52□□□□□ -0.89
RIF1-211ENST00000494333 RAVER2Q9HCJ3 691 aaKnown RBP9.52□□□□□ -0.89
RIF1-211ENST00000494333 DIAPH3Q9NSV4 1193 aa9.52□□□□□ -0.89
RIF1-211ENST00000494333 RIPK3Q9Y572 518 aa9.52□□□□□ -0.89
RIF1-211ENST00000494333 CCDC171Q6TFL3 1326 aa9.52□□□□□ -0.89
RIF1-211ENST00000494333 PLXNB2O15031 1838 aa9.52□□□□□ -0.89
RIF1-211ENST00000494333 PLIN4Q96Q06 1357 aa9.51□□□□□ -0.89
RIF1-211ENST00000494333 HIP1O00291 1037 aa9.51□□□□□ -0.89
RIF1-211ENST00000494333 ATP2A1O14983 1001 aa9.51□□□□□ -0.89
RIF1-211ENST00000494333 ORC4O43929 436 aa9.51□□□□□ -0.89
RIF1-211ENST00000494333 ITGB2P05107 769 aa9.51□□□□□ -0.89
RIF1-211ENST00000494333 STAT2P52630 851 aa9.51□□□□□ -0.89
RIF1-211ENST00000494333 IKQ13123 557 aaPredicted RBP9.51□□□□□ -0.89
RIF1-211ENST00000494333 ZNF792Q3KQV3 632 aa9.51□□□□□ -0.89
RIF1-211ENST00000494333 ANO1Q5XXA6 986 aa9.51□□□□□ -0.89
RIF1-211ENST00000494333 RCSD1Q6JBY9 416 aa9.51□□□□□ -0.89
RIF1-211ENST00000494333 MFSD6Q6ZSS7 791 aa9.51□□□□□ -0.89
RIF1-211ENST00000494333 KCTD1Q719H9 257 aa9.51□□□□□ -0.89
RIF1-211ENST00000494333 CHURC1Q8WUH1 139 aa9.51□□□□□ -0.89
RIF1-211ENST00000494333 DDX11Q96FC9 970 aa9.51□□□□□ -0.89
RIF1-211ENST00000494333 SENP6Q9GZR1 1112 aaPredicted RBP9.51□□□□□ -0.89
RIF1-211ENST00000494333 SLC38A10Q9HBR0 1119 aa9.51□□□□□ -0.89
RIF1-211ENST00000494333 TMEM39AQ9NV64 488 aa9.51□□□□□ -0.89
RIF1-211ENST00000494333 GPN3Q9UHW5 284 aaPredicted RBP9.51□□□□□ -0.89
RIF1-211ENST00000494333 PPM1HQ9ULR3 514 aa9.51□□□□□ -0.89
RIF1-211ENST00000494333 DIS3Q9Y2L1 958 aaKnown RBP9.51□□□□□ -0.89
RIF1-211ENST00000494333 ZNF213O14771 459 aa9.5□□□□□ -0.89
RIF1-211ENST00000494333 SEPT4O43236 478 aa9.5□□□□□ -0.89
RIF1-211ENST00000494333 CTSHP09668 335 aa9.5□□□□□ -0.89
RIF1-211ENST00000494333 COL6A1P12109 1028 aa9.5□□□□□ -0.89
RIF1-211ENST00000494333 NRG1Q02297 640 aaPredicted RBP9.5□□□□□ -0.89
RIF1-211ENST00000494333 DUOXA2Q1HG44 320 aa9.5□□□□□ -0.89
RIF1-211ENST00000494333 PLA2G4EQ3MJ16 856 aa9.5□□□□□ -0.89
RIF1-211ENST00000494333 AKNAD1Q5T1N1 836 aa9.5□□□□□ -0.89
RIF1-211ENST00000494333 FAM160B2Q86V87 743 aa9.5□□□□□ -0.89
RIF1-211ENST00000494333 C7orf61Q8IZ16 206 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms