RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 NXPE1Q8N323 547 aa3.29□□□□□ -1.88
LMNB1-207ENST00000494185 FAM26EQ8N5C1 309 aa3.29□□□□□ -1.88
LMNB1-207ENST00000494185 EFHBQ8N7U6 833 aa3.29□□□□□ -1.88
LMNB1-207ENST00000494185 UBR7Q8N806 425 aa3.29□□□□□ -1.88
LMNB1-207ENST00000494185 KIAA1958Q8N8K9 716 aa3.29□□□□□ -1.88
LMNB1-207ENST00000494185 MARCH10Q8NA82 808 aaPredicted RBP3.29□□□□□ -1.88
LMNB1-207ENST00000494185 ZCRB1Q8TBF4 217 aaKnown RBP3.29□□□□□ -1.88
LMNB1-207ENST00000494185 PAWRQ96IZ0 340 aaKnown RBP3.29□□□□□ -1.88
LMNB1-207ENST00000494185 MAML3Q96JK9 1138 aa3.29□□□□□ -1.88
LMNB1-207ENST00000494185 GBP4Q96PP9 640 aa3.29□□□□□ -1.88
LMNB1-207ENST00000494185 TTC1Q99614 292 aa3.29□□□□□ -1.88
LMNB1-207ENST00000494185 CARD11Q9BXL7 1154 aa3.29□□□□□ -1.88
LMNB1-207ENST00000494185 OR10A5Q9H207 317 aa3.29□□□□□ -1.88
LMNB1-207ENST00000494185 THG1LQ9NWX6 298 aaKnown RBP3.29□□□□□ -1.88
LMNB1-207ENST00000494185 RTEL1Q9NZ71 1219 aa3.29□□□□□ -1.88
LMNB1-207ENST00000494185 MCM8Q9UJA3 840 aa3.29□□□□□ -1.88
LMNB1-207ENST00000494185 APOBEC2Q9Y235 224 aaKnown RBP3.29□□□□□ -1.88
LMNB1-207ENST00000494185 VWA7Q9Y334 891 aa3.29□□□□□ -1.88
LMNB1-207ENST00000494185 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.28□□□□□ -1.88
LMNB1-207ENST00000494185 DDX3XO00571 662 aaKnown RBP eCLIP3.28□□□□□ -1.88
LMNB1-207ENST00000494185 FFAR3O14843 346 aa3.28□□□□□ -1.88
LMNB1-207ENST00000494185 ZEB2O60315 1214 aa3.28□□□□□ -1.88
LMNB1-207ENST00000494185 NRP2O60462 931 aa3.28□□□□□ -1.88
LMNB1-207ENST00000494185 H2AFYO75367 372 aaKnown RBP3.28□□□□□ -1.88
LMNB1-207ENST00000494185 C4BPAP04003 597 aaKnown RBP3.28□□□□□ -1.88
LMNB1-207ENST00000494185 ATP2A2P16615 1042 aaKnown RBP3.28□□□□□ -1.88
LMNB1-207ENST00000494185 SYN1P17600 705 aa3.28□□□□□ -1.88
LMNB1-207ENST00000494185 XPAP23025 273 aaPredicted RBP3.28□□□□□ -1.88
LMNB1-207ENST00000494185 LSP1P33241 339 aa3.28□□□□□ -1.88
LMNB1-207ENST00000494185 ECE1P42892 770 aa3.28□□□□□ -1.88
LMNB1-207ENST00000494185 ETV4P43268 484 aa3.28□□□□□ -1.88
LMNB1-207ENST00000494185 GLRBP48167 497 aa3.28□□□□□ -1.88
LMNB1-207ENST00000494185 LSSP48449 732 aa3.28□□□□□ -1.88
LMNB1-207ENST00000494185 STRN3Q13033 797 aa3.28□□□□□ -1.88
LMNB1-207ENST00000494185 ADAM9Q13443 819 aa3.28□□□□□ -1.88
LMNB1-207ENST00000494185 USP10Q14694 798 aaKnown RBP3.28□□□□□ -1.88
LMNB1-207ENST00000494185 EPHA7Q15375 998 aa3.28□□□□□ -1.88
LMNB1-207ENST00000494185 SEC23AQ15436 765 aa3.28□□□□□ -1.88
LMNB1-207ENST00000494185 SKOR2Q2VWA4 1001 aaPredicted RBP3.28□□□□□ -1.88
LMNB1-207ENST00000494185 FBLN7Q53RD9 439 aa3.28□□□□□ -1.88
LMNB1-207ENST00000494185 MCTP2Q6DN12 878 aa3.28□□□□□ -1.88
LMNB1-207ENST00000494185 GRAMD4Q6IC98 578 aa3.28□□□□□ -1.88
LMNB1-207ENST00000494185 FSTL4Q6MZW2 842 aa3.28□□□□□ -1.88
LMNB1-207ENST00000494185 GLB1LQ6UWU2 654 aa3.28□□□□□ -1.88
LMNB1-207ENST00000494185 ESPNLQ6ZVH7 1005 aa3.28□□□□□ -1.88
LMNB1-207ENST00000494185 ZNF761Q86XN6 746 aaPredicted RBP3.28□□□□□ -1.88
LMNB1-207ENST00000494185 SMC1BQ8NDV3 1235 aa3.28□□□□□ -1.88
LMNB1-207ENST00000494185 ZNF526Q8TF50 670 aaPredicted RBP3.28□□□□□ -1.88
LMNB1-207ENST00000494185 CHTF18Q8WVB6 975 aa3.28□□□□□ -1.88
LMNB1-207ENST00000494185 DLG3Q92796 817 aa3.28□□□□□ -1.88
LMNB1-207ENST00000494185 GFM2Q969S9 779 aaKnown RBP3.28□□□□□ -1.88
LMNB1-207ENST00000494185 FERMT2Q96AC1 680 aa3.28□□□□□ -1.88
LMNB1-207ENST00000494185 SPATA25Q9BR10 227 aa3.28□□□□□ -1.88
LMNB1-207ENST00000494185 BRINP2Q9C0B6 783 aa3.28□□□□□ -1.88
LMNB1-207ENST00000494185 WNT8AQ9H1J5 351 aa3.28□□□□□ -1.88
LMNB1-207ENST00000494185 IFT22Q9H7X7 185 aa3.28□□□□□ -1.88
LMNB1-207ENST00000494185 OXSMQ9NWU1 459 aa3.28□□□□□ -1.88
LMNB1-207ENST00000494185 SPO11Q9Y5K1 396 aa3.28□□□□□ -1.88
LMNB1-207ENST00000494185 A0A0G2JNJ9 132 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 DAPK3O43293 454 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 LAMTOR5O43504 91 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 TRIM13O60858 407 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 FKBP9O95302 570 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 MMEP08473 750 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 SLC9A1P19634 815 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 IBSPP21815 317 aaPredicted RBP3.27□□□□□ -1.89
LMNB1-207ENST00000494185 ADCYAP1R1P41586 468 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 NRG3P56975 720 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 RAC3P60763 192 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 NFKB2Q00653 900 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 DGKDQ16760 1214 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 ZFYVE27Q5T4F4 411 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 GPR158Q5T848 1215 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 PRAMEF9Q5VWM5 478 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 SLFN12LQ6IEE8 588 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 FAM180AQ6UWF9 173 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 FKBP9P1Q75LS8 142 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 STK32CQ86UX6 486 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 PROSER1Q86XN7 944 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 C1QL4Q86Z23 238 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 AFAP1L2Q8N4X5 818 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 STPG3Q8N7X2 389 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 TXNDC5Q8NBS9 432 aaKnown RBP3.27□□□□□ -1.89
LMNB1-207ENST00000494185 RSAD2Q8WXG1 361 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 ASB15Q8WXK1 588 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 ERCC4Q92889 916 aaPredicted RBP3.27□□□□□ -1.89
LMNB1-207ENST00000494185 HIST1H2AHQ96KK5 128 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 YTHDC1Q96MU7 727 aaKnown RBP3.27□□□□□ -1.89
LMNB1-207ENST00000494185 GPR101Q96P66 508 aaPredicted RBP3.27□□□□□ -1.89
LMNB1-207ENST00000494185 NOX5Q96PH1 765 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 KCNC2Q96PR1 638 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 TUBGCP5Q96RT8 1024 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 HIST1H2AJQ99878 128 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 TACO1Q9BSH4 297 aaKnown RBP3.27□□□□□ -1.89
LMNB1-207ENST00000494185 EPB41L4AQ9HCS5 686 aaPredicted RBP3.27□□□□□ -1.89
LMNB1-207ENST00000494185 SLC39A2Q9NP94 309 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 TOMM22Q9NS69 142 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 KCND1Q9NSA2 647 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 KCMF1Q9P0J7 381 aa3.27□□□□□ -1.89
LMNB1-207ENST00000494185 SAE1Q9UBE0 346 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms