RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 PRKAG3Q9UGI9 489 aa3.21□□□□□ -1.9
CDC42EP3-205ENST00000494083 FAN1Q9Y2M0 1017 aa3.21□□□□□ -1.9
CDC42EP3-205ENST00000494083 SIP14410 1827 aa3.21□□□□□ -1.9
CDC42EP3-205ENST00000494083 NCANO14594 1321 aa3.2□□□□□ -1.9
CDC42EP3-205ENST00000494083 ITGB4P16144 1822 aa3.2□□□□□ -1.9
CDC42EP3-205ENST00000494083 C22orf46C9J442 243 aa3.2□□□□□ -1.9
CDC42EP3-205ENST00000494083 SGSM2O43147 1006 aa3.2□□□□□ -1.9
CDC42EP3-205ENST00000494083 EPB41L2O43491 1005 aaKnown RBP3.2□□□□□ -1.9
CDC42EP3-205ENST00000494083 BCL6P41182 706 aa3.2□□□□□ -1.9
CDC42EP3-205ENST00000494083 FOXO4P98177 505 aa3.2□□□□□ -1.9
CDC42EP3-205ENST00000494083 KREMEN2Q8NCW0 462 aa3.2□□□□□ -1.9
CDC42EP3-205ENST00000494083 LRP2BPQ9P2M1 347 aa3.2□□□□□ -1.9
CDC42EP3-205ENST00000494083 RBPJLQ9UBG7 517 aa3.2□□□□□ -1.9
CDC42EP3-205ENST00000494083 STRIP2Q9ULQ0 834 aa3.2□□□□□ -1.9
CDC42EP3-205ENST00000494083 ARFGEF1Q9Y6D6 1849 aa3.2□□□□□ -1.9
CDC42EP3-205ENST00000494083 MAPK8IP3Q9UPT6 1336 aa3.2□□□□□ -1.9
CDC42EP3-205ENST00000494083 SNRPB2P08579 225 aaKnown RBP3.2□□□□□ -1.9
CDC42EP3-205ENST00000494083 TAF1P21675 1872 aa3.2□□□□□ -1.9
CDC42EP3-205ENST00000494083 STAT5AP42229 794 aa3.2□□□□□ -1.9
CDC42EP3-205ENST00000494083 PPP2R2AP63151 447 aa3.2□□□□□ -1.9
CDC42EP3-205ENST00000494083 HTRA3P83110 453 aa3.2□□□□□ -1.9
CDC42EP3-205ENST00000494083 DMTNQ08495 405 aa3.2□□□□□ -1.9
CDC42EP3-205ENST00000494083 RCBTB1Q8NDN9 531 aa3.2□□□□□ -1.9
CDC42EP3-205ENST00000494083 NLGN2Q8NFZ4 835 aa3.2□□□□□ -1.9
CDC42EP3-205ENST00000494083 PCDHA2Q9Y5H9 948 aa3.2□□□□□ -1.9
CDC42EP3-205ENST00000494083 PMF1-BGLAPU3KQ54 211 aa3.2□□□□□ -1.9
CDC42EP3-205ENST00000494083 DOCK5Q9H7D0 1870 aa3.2□□□□□ -1.9
CDC42EP3-205ENST00000494083 NOP56O00567 594 aaKnown RBP3.2□□□□□ -1.9
CDC42EP3-205ENST00000494083 C8BP07358 591 aa3.2□□□□□ -1.9
CDC42EP3-205ENST00000494083 TMEM62Q0P6H9 643 aa3.2□□□□□ -1.9
CDC42EP3-205ENST00000494083 RBM43Q6ZSC3 357 aaKnown RBP3.2□□□□□ -1.9
CDC42EP3-205ENST00000494083 CABP7Q86V35 215 aa3.2□□□□□ -1.9
CDC42EP3-205ENST00000494083 ZBTB8AQ96BR9 441 aa3.2□□□□□ -1.9
CDC42EP3-205ENST00000494083 APBA2Q99767 749 aa3.2□□□□□ -1.9
CDC42EP3-205ENST00000494083 PPARGC1AQ9UBK2 798 aaKnown RBP3.2□□□□□ -1.9
CDC42EP3-205ENST00000494083 COL15A1P39059 1388 aa3.2□□□□□ -1.9
CDC42EP3-205ENST00000494083 FOXD2O60548 495 aaPredicted RBP3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 TPM2P07951 284 aa3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 POMZP3Q6PJE2 187 aa3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 RBM12BQ8IXT5 1001 aaKnown RBP3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 PPIL6Q8IXY8 311 aa3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 GORASP1Q9BQQ3 440 aa3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 KRTAP9-3Q9BYQ3 159 aa3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 CYP26B1Q9NR63 512 aa3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 DUSP10Q9Y6W6 482 aa3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 ADCY9O60503 1353 aa3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 KDRP35968 1356 aa3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 CCDC85CA6NKD9 419 aa3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 B8ZZF3 427 aa3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 PRRG2O14669 202 aa3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 MSCO60682 206 aa3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 GFRA1P56159 465 aa3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 FAM193AP78312 1265 aa3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 RTP5Q14D33 572 aa3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 NCAPHQ15003 741 aa3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 CEP68Q76N32 757 aa3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 GAS2L3Q86XJ1 694 aa3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 WDR63Q8IWG1 891 aa3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 ZSWIM3Q96MP5 696 aa3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 KRTAP4-2Q9BYR5 136 aa3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 PALD1Q9ULE6 856 aa3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 USP42Q9H9J4 1324 aaKnown RBP3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 MYH6P13533 1939 aa3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 MCM5P33992 734 aa3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 KCNJ6P48051 423 aa3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 PHF19Q5T6S3 580 aa3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 MILR1Q7Z6M3 343 aa3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 FERMT3Q86UX7 667 aa3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 IER2Q9BTL4 223 aa3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 PDCL3Q9H2J4 239 aa3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 NOL7Q9UMY1 257 aaKnown RBP3.19□□□□□ -1.9
CDC42EP3-205ENST00000494083 HEG1Q9ULI3 1381 aa3.18□□□□□ -1.9
CDC42EP3-205ENST00000494083 BLACEA4D250 179 aa3.18□□□□□ -1.9
CDC42EP3-205ENST00000494083 PFKLP17858 780 aa3.18□□□□□ -1.9
CDC42EP3-205ENST00000494083 SLURP1P55000 103 aa3.18□□□□□ -1.9
CDC42EP3-205ENST00000494083 SKOR2Q2VWA4 1001 aaPredicted RBP3.18□□□□□ -1.9
CDC42EP3-205ENST00000494083 ANKS3Q6ZW76 656 aa3.18□□□□□ -1.9
CDC42EP3-205ENST00000494083 ARRDC4Q8NCT1 418 aa3.18□□□□□ -1.9
CDC42EP3-205ENST00000494083 TSPAN17Q96FV3 270 aa3.18□□□□□ -1.9
CDC42EP3-205ENST00000494083 WASF3Q9UPY6 502 aa3.18□□□□□ -1.9
CDC42EP3-205ENST00000494083 ZDHHC9Q9Y397 364 aa3.18□□□□□ -1.9
CDC42EP3-205ENST00000494083 NEDD4P46934 1319 aa3.18□□□□□ -1.9
CDC42EP3-205ENST00000494083 NCAM1P13591 858 aa3.18□□□□□ -1.9
CDC42EP3-205ENST00000494083 ARID5AQ03989 594 aa3.18□□□□□ -1.9
CDC42EP3-205ENST00000494083 B3GNT8Q7Z7M8 397 aa3.18□□□□□ -1.9
CDC42EP3-205ENST00000494083 NETO2Q8NC67 525 aa3.18□□□□□ -1.9
CDC42EP3-205ENST00000494083 CDIP1Q9H305 208 aa3.18□□□□□ -1.9
CDC42EP3-205ENST00000494083 FNDC1Q4ZHG4 1894 aaPredicted RBP3.18□□□□□ -1.9
CDC42EP3-205ENST00000494083 SOS1Q07889 1333 aaPredicted RBP3.18□□□□□ -1.9
CDC42EP3-205ENST00000494083 CARMIL3Q8ND23 1372 aa3.18□□□□□ -1.9
CDC42EP3-205ENST00000494083 A0A1W2PQU0 124 aa3.18□□□□□ -1.9
CDC42EP3-205ENST00000494083 NPHS1O60500 1241 aa3.18□□□□□ -1.9
CDC42EP3-205ENST00000494083 CAPNS1P04632 268 aa3.18□□□□□ -1.9
CDC42EP3-205ENST00000494083 MMP14P50281 582 aa3.18□□□□□ -1.9
CDC42EP3-205ENST00000494083 DDR2Q16832 855 aa3.18□□□□□ -1.9
CDC42EP3-205ENST00000494083 SAPCD2Q86UD0 394 aa3.18□□□□□ -1.9
CDC42EP3-205ENST00000494083 DDX1Q92499 740 aaKnown RBP3.18□□□□□ -1.9
CDC42EP3-205ENST00000494083 MMP19Q99542 508 aa3.18□□□□□ -1.9
CDC42EP3-205ENST00000494083 SPATA6Q9NWH7 488 aaPredicted RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms