RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 NLRP5P59047 1200 aa15.17■□□□□ 0.02
CTDSP1-212ENST00000494067 SSRP1Q08945 709 aaKnown RBP15.17■□□□□ 0.02
CTDSP1-212ENST00000494067 SCRN1Q12765 414 aa15.17■□□□□ 0.02
CTDSP1-212ENST00000494067 PAK2Q13177 524 aa15.17■□□□□ 0.02
CTDSP1-212ENST00000494067 UGCGQ16739 394 aa15.17■□□□□ 0.02
CTDSP1-212ENST00000494067 ZNF746Q6NUN9 644 aaPredicted RBP15.17■□□□□ 0.02
CTDSP1-212ENST00000494067 ATP8B4Q8TF62 1192 aa15.17■□□□□ 0.02
CTDSP1-212ENST00000494067 ZNF274Q96GC6 653 aaPredicted RBP15.17■□□□□ 0.02
CTDSP1-212ENST00000494067 C11orf84Q9BUA3 381 aaPredicted RBP15.17■□□□□ 0.02
CTDSP1-212ENST00000494067 C22orf23Q9BZE7 217 aa15.17■□□□□ 0.02
CTDSP1-212ENST00000494067 SH3GLB2Q9NR46 395 aa15.17■□□□□ 0.02
CTDSP1-212ENST00000494067 PDRG1Q9NUG6 133 aa15.17■□□□□ 0.02
CTDSP1-212ENST00000494067 PPP4R2Q9NY27 417 aa15.17■□□□□ 0.02
CTDSP1-212ENST00000494067 LRFN2Q9ULH4 789 aa15.17■□□□□ 0.02
CTDSP1-212ENST00000494067 TPCN1Q9ULQ1 816 aa15.17■□□□□ 0.02
CTDSP1-212ENST00000494067 CEP131Q9UPN4 1083 aa15.17■□□□□ 0.02
CTDSP1-212ENST00000494067 IGSF9BQ9UPX0 1349 aa15.17■□□□□ 0.02
CTDSP1-212ENST00000494067 ZNF862O60290 1169 aa15.16■□□□□ 0.02
CTDSP1-212ENST00000494067 MGEA5O60502 916 aa15.16■□□□□ 0.02
CTDSP1-212ENST00000494067 LARGE1O95461 756 aa15.16■□□□□ 0.02
CTDSP1-212ENST00000494067 CTDNEP1O95476 244 aa15.16■□□□□ 0.02
CTDSP1-212ENST00000494067 TDP2O95551 362 aa15.16■□□□□ 0.02
CTDSP1-212ENST00000494067 C22orf31O95567 290 aa15.16■□□□□ 0.02
CTDSP1-212ENST00000494067 CTNNB1P35222 781 aa15.16■□□□□ 0.02
CTDSP1-212ENST00000494067 BTG3Q14201 252 aaPredicted RBP15.16■□□□□ 0.02
CTDSP1-212ENST00000494067 TMEM266Q2M3C6 531 aa15.16■□□□□ 0.02
CTDSP1-212ENST00000494067 TRMT1LQ7Z2T5 733 aaKnown RBP15.16■□□□□ 0.02
CTDSP1-212ENST00000494067 KIAA0319LQ8IZA0 1049 aa15.16■□□□□ 0.02
CTDSP1-212ENST00000494067 TBCKQ8TEA7 893 aa15.16■□□□□ 0.02
CTDSP1-212ENST00000494067 BBXQ8WY36 941 aaPredicted RBP15.16■□□□□ 0.02
CTDSP1-212ENST00000494067 ZNF689Q96CS4 500 aaPredicted RBP15.16■□□□□ 0.02
CTDSP1-212ENST00000494067 PPP1R16BQ96T49 567 aa15.16■□□□□ 0.02
CTDSP1-212ENST00000494067 PADI3Q9ULW8 664 aa15.16■□□□□ 0.02
CTDSP1-212ENST00000494067 GINS2Q9Y248 185 aa15.16■□□□□ 0.02
CTDSP1-212ENST00000494067 PCDHA10Q9Y5I2 948 aa15.16■□□□□ 0.02
CTDSP1-212ENST00000494067 MAFBQ9Y5Q3 323 aaPredicted RBP15.16■□□□□ 0.02
CTDSP1-212ENST00000494067 ADGRA3Q8IWK6 1321 aa15.16■□□□□ 0.02
CTDSP1-212ENST00000494067 SEC24BO95487 1268 aa15.15■□□□□ 0.02
CTDSP1-212ENST00000494067 BMPR1AP36894 532 aa15.15■□□□□ 0.02
CTDSP1-212ENST00000494067 GATMP50440 423 aa15.15■□□□□ 0.02
CTDSP1-212ENST00000494067 USP11P51784 963 aa15.15■□□□□ 0.02
CTDSP1-212ENST00000494067 NFX1Q12986 1120 aaKnown RBP15.15■□□□□ 0.02
CTDSP1-212ENST00000494067 NPAS4Q8IUM7 802 aa15.15■□□□□ 0.02
CTDSP1-212ENST00000494067 BANK1Q8NDB2 785 aa15.15■□□□□ 0.02
CTDSP1-212ENST00000494067 LMAN2LQ9H0V9 348 aa15.15■□□□□ 0.02
CTDSP1-212ENST00000494067 UNC45AQ9H3U1 944 aa15.15■□□□□ 0.02
CTDSP1-212ENST00000494067 UBE2ZQ9H832 354 aaPredicted RBP15.15■□□□□ 0.02
CTDSP1-212ENST00000494067 GABBR1Q9UBS5 961 aa15.15■□□□□ 0.02
CTDSP1-212ENST00000494067 PCDHA4Q9UN74 947 aa15.15■□□□□ 0.02
CTDSP1-212ENST00000494067 KCNJ14Q9UNX9 436 aa15.15■□□□□ 0.02
CTDSP1-212ENST00000494067 KDM3AQ9Y4C1 1321 aa15.15■□□□□ 0.02
CTDSP1-212ENST00000494067 FNDC1Q4ZHG4 1894 aaPredicted RBP15.14■□□□□ 0.01
CTDSP1-212ENST00000494067 PLXNA4Q9HCM2 1894 aa15.14■□□□□ 0.01
CTDSP1-212ENST00000494067 TTC28Q96AY4 2481 aa15.14■□□□□ 0.01
CTDSP1-212ENST00000494067 WDR64B1ANS9 1081 aa15.14■□□□□ 0.01
CTDSP1-212ENST00000494067 GPR182O15218 404 aa15.14■□□□□ 0.01
CTDSP1-212ENST00000494067 NCK2O43639 380 aa15.14■□□□□ 0.01
CTDSP1-212ENST00000494067 DGKIO75912 1065 aa15.14■□□□□ 0.01
CTDSP1-212ENST00000494067 DEXIO95424 95 aa15.14■□□□□ 0.01
CTDSP1-212ENST00000494067 TMOD1P28289 359 aa15.14■□□□□ 0.01
CTDSP1-212ENST00000494067 PUS10Q3MIT2 529 aaKnown RBP15.14■□□□□ 0.01
CTDSP1-212ENST00000494067 B3GNT9Q6UX72 402 aa15.14■□□□□ 0.01
CTDSP1-212ENST00000494067 EP400NLQ6ZTU2 488 aa15.14■□□□□ 0.01
CTDSP1-212ENST00000494067 LINC01465Q8N7H1 131 aa15.14■□□□□ 0.01
CTDSP1-212ENST00000494067 DAGLBQ8NCG7 672 aa15.14■□□□□ 0.01
CTDSP1-212ENST00000494067 SLC5A5Q92911 643 aa15.14■□□□□ 0.01
CTDSP1-212ENST00000494067 FAM167AQ96KS9 214 aa15.14■□□□□ 0.01
CTDSP1-212ENST00000494067 NSUN3Q9H649 340 aaKnown RBP15.14■□□□□ 0.01
CTDSP1-212ENST00000494067 ERVK-5Q9HDB9 667 aa15.14■□□□□ 0.01
CTDSP1-212ENST00000494067 NOC2LQ9Y3T9 749 aaKnown RBP15.14■□□□□ 0.01
CTDSP1-212ENST00000494067 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.13■□□□□ 0.01
CTDSP1-212ENST00000494067 TMEM150BA6NC51 233 aa15.13■□□□□ 0.01
CTDSP1-212ENST00000494067 C5orf67F2Z3F1 127 aa15.13■□□□□ 0.01
CTDSP1-212ENST00000494067 MAGEB2O15479 319 aa15.13■□□□□ 0.01
CTDSP1-212ENST00000494067 CHMP2AO43633 222 aa15.13■□□□□ 0.01
CTDSP1-212ENST00000494067 SLC37A4O43826 429 aa15.13■□□□□ 0.01
CTDSP1-212ENST00000494067 GPR32O75388 356 aa15.13■□□□□ 0.01
CTDSP1-212ENST00000494067 RPS6KA5O75582 802 aa15.13■□□□□ 0.01
CTDSP1-212ENST00000494067 PSMD10O75832 226 aa15.13■□□□□ 0.01
CTDSP1-212ENST00000494067 KCNA5P22460 613 aa15.13■□□□□ 0.01
CTDSP1-212ENST00000494067 SFNP31947 248 aa15.13■□□□□ 0.01
CTDSP1-212ENST00000494067 EARS2Q5JPH6 523 aaKnown RBP15.13■□□□□ 0.01
CTDSP1-212ENST00000494067 CMTR2Q8IYT2 770 aaKnown RBP15.13■□□□□ 0.01
CTDSP1-212ENST00000494067 BLIDQ8IZY5 108 aa15.13■□□□□ 0.01
CTDSP1-212ENST00000494067 FAM177A1Q8N128 213 aaPredicted RBP15.13■□□□□ 0.01
CTDSP1-212ENST00000494067 ZNF710Q8N1W2 664 aa15.13■□□□□ 0.01
CTDSP1-212ENST00000494067 METTL13Q8N6R0 699 aa15.13■□□□□ 0.01
CTDSP1-212ENST00000494067 OXER1Q8TDS5 423 aa15.13■□□□□ 0.01
CTDSP1-212ENST00000494067 MBOAT7Q96N66 472 aa15.13■□□□□ 0.01
CTDSP1-212ENST00000494067 PLVAPQ9BX97 442 aa15.13■□□□□ 0.01
CTDSP1-212ENST00000494067 C1QTNF1Q9BXJ1 281 aa15.13■□□□□ 0.01
CTDSP1-212ENST00000494067 C1orf112Q9NSG2 853 aa15.13■□□□□ 0.01
CTDSP1-212ENST00000494067 NRBP2Q9NSY0 501 aa15.13■□□□□ 0.01
CTDSP1-212ENST00000494067 FAM50BQ9Y247 325 aa15.13■□□□□ 0.01
CTDSP1-212ENST00000494067 PCDHB7Q9Y5E2 793 aa15.13■□□□□ 0.01
CTDSP1-212ENST00000494067 DENND3A2RUS2 1198 aa15.12■□□□□ 0.01
CTDSP1-212ENST00000494067 FAM205CA6NFA0 338 aa15.12■□□□□ 0.01
CTDSP1-212ENST00000494067 PFKFB2O60825 505 aa15.12■□□□□ 0.01
CTDSP1-212ENST00000494067 GAS7O60861 476 aa15.12■□□□□ 0.01
CTDSP1-212ENST00000494067 CDKL5O76039 1030 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms