RNA–Protein interactions for RNA: ENST00000493726.1

LRCH3-218, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 733 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-218ENST00000493726 CD96P40200 585 aa9.12□□□□□ -0.95
LRCH3-218ENST00000493726 HMGCS2P54868 508 aa9.12□□□□□ -0.95
LRCH3-218ENST00000493726 ERVK-24P63145 666 aa9.12□□□□□ -0.95
LRCH3-218ENST00000493726 PABPC4Q13310 644 aaKnown RBP eCLIP9.12□□□□□ -0.95
LRCH3-218ENST00000493726 C12orf60Q5U649 245 aa9.12□□□□□ -0.95
LRCH3-218ENST00000493726 ALG1LQ6GMV1 187 aa9.12□□□□□ -0.95
LRCH3-218ENST00000493726 UBE3DQ7Z6J8 389 aa9.12□□□□□ -0.95
LRCH3-218ENST00000493726 UBE2Q1Q7Z7E8 422 aa9.12□□□□□ -0.95
LRCH3-218ENST00000493726 C12orf40Q86WS4 652 aa9.12□□□□□ -0.95
LRCH3-218ENST00000493726 RNF214Q8ND24 703 aa9.12□□□□□ -0.95
LRCH3-218ENST00000493726 DNAJC2Q99543 621 aaKnown RBP9.12□□□□□ -0.95
LRCH3-218ENST00000493726 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.12□□□□□ -0.95
LRCH3-218ENST00000493726 ASCC2Q9H1I8 757 aaPredicted RBP9.12□□□□□ -0.95
LRCH3-218ENST00000493726 GOLGA2P5Q9HBQ8 144 aa9.12□□□□□ -0.95
LRCH3-218ENST00000493726 SLC5A6Q9Y289 635 aa9.12□□□□□ -0.95
LRCH3-218ENST00000493726 KIAA0100Q14667 2235 aaKnown RBP9.12□□□□□ -0.95
LRCH3-218ENST00000493726 GH2P01242 217 aa9.11□□□□□ -0.95
LRCH3-218ENST00000493726 CAPN2P17655 700 aa9.11□□□□□ -0.95
LRCH3-218ENST00000493726 PSMC4P43686 418 aa9.11□□□□□ -0.95
LRCH3-218ENST00000493726 ATP2B2Q01814 1243 aa9.11□□□□□ -0.95
LRCH3-218ENST00000493726 KIF22Q14807 665 aa9.11□□□□□ -0.95
LRCH3-218ENST00000493726 SBK1Q52WX2 424 aa9.11□□□□□ -0.95
LRCH3-218ENST00000493726 ZSCAN25Q6NSZ9 544 aa9.11□□□□□ -0.95
LRCH3-218ENST00000493726 C16orf86Q6ZW13 317 aa9.11□□□□□ -0.95
LRCH3-218ENST00000493726 SIAH1Q8IUQ4 282 aa9.11□□□□□ -0.95
LRCH3-218ENST00000493726 SMC5Q8IY18 1101 aa9.11□□□□□ -0.95
LRCH3-218ENST00000493726 STRBPQ96SI9 672 aaKnown RBP9.11□□□□□ -0.95
LRCH3-218ENST00000493726 PUS7LQ9H0K6 701 aaKnown RBP9.11□□□□□ -0.95
LRCH3-218ENST00000493726 CACNA2D2Q9NY47 1150 aa9.11□□□□□ -0.95
LRCH3-218ENST00000493726 SWAP70Q9UH65 585 aa9.11□□□□□ -0.95
LRCH3-218ENST00000493726 SAP30BPQ9UHR5 308 aaKnown RBP9.11□□□□□ -0.95
LRCH3-218ENST00000493726 GJD2Q9UKL4 321 aa9.11□□□□□ -0.95
LRCH3-218ENST00000493726 PARP14Q460N5 1801 aa9.1□□□□□ -0.95
LRCH3-218ENST00000493726 BAZ2AQ9UIF9 1905 aaKnown RBP9.1□□□□□ -0.95
LRCH3-218ENST00000493726 MBD4O95243 580 aa9.1□□□□□ -0.95
LRCH3-218ENST00000493726 ZFYP08048 801 aaPredicted RBP9.1□□□□□ -0.95
LRCH3-218ENST00000493726 USP17L7P0C7H9 530 aa9.1□□□□□ -0.95
LRCH3-218ENST00000493726 TXKP42681 527 aa9.1□□□□□ -0.95
LRCH3-218ENST00000493726 CERKLQ49MI3 558 aaPredicted RBP9.1□□□□□ -0.95
LRCH3-218ENST00000493726 GADL1Q6ZQY3 521 aa9.1□□□□□ -0.95
LRCH3-218ENST00000493726 CRACR2BQ8N4Y2 399 aaPredicted RBP9.1□□□□□ -0.95
LRCH3-218ENST00000493726 AGBL5Q8NDL9 886 aa9.1□□□□□ -0.95
LRCH3-218ENST00000493726 NETO1Q8TDF5 533 aa9.1□□□□□ -0.95
LRCH3-218ENST00000493726 SDR42E1Q8WUS8 393 aa9.1□□□□□ -0.95
LRCH3-218ENST00000493726 APPBP2Q92624 585 aa9.1□□□□□ -0.95
LRCH3-218ENST00000493726 USP6NLQ92738 828 aa9.1□□□□□ -0.95
LRCH3-218ENST00000493726 OSBP2Q969R2 916 aa9.1□□□□□ -0.95
LRCH3-218ENST00000493726 GCC1Q96CN9 775 aa9.1□□□□□ -0.95
LRCH3-218ENST00000493726 CRBNQ96SW2 442 aa9.1□□□□□ -0.95
LRCH3-218ENST00000493726 CEP44Q9C0F1 390 aa9.1□□□□□ -0.95
LRCH3-218ENST00000493726 C12orf49Q9H741 205 aa9.1□□□□□ -0.95
LRCH3-218ENST00000493726 ARMT1Q9H993 441 aa9.1□□□□□ -0.95
LRCH3-218ENST00000493726 ZNF236Q9UL36 1845 aa9.1□□□□□ -0.95
LRCH3-218ENST00000493726 DOCK3Q8IZD9 2030 aa9.09□□□□□ -0.95
LRCH3-218ENST00000493726 A0A1W2PRG0 241 aa9.09□□□□□ -0.95
LRCH3-218ENST00000493726 GSG1L2A8MUP6 293 aa9.09□□□□□ -0.95
LRCH3-218ENST00000493726 FOXP2O15409 715 aa9.09□□□□□ -0.95
LRCH3-218ENST00000493726 PRKAB2O43741 272 aa9.09□□□□□ -0.95
LRCH3-218ENST00000493726 GLRX3O76003 335 aaKnown RBP9.09□□□□□ -0.95
LRCH3-218ENST00000493726 HOXD10P28358 340 aa9.09□□□□□ -0.95
LRCH3-218ENST00000493726 NTF4P34130 210 aa9.09□□□□□ -0.95
LRCH3-218ENST00000493726 FXR1P51114 621 aaKnown RBP eCLIP9.09□□□□□ -0.95
LRCH3-218ENST00000493726 USP14P54578 494 aa9.09□□□□□ -0.95
LRCH3-218ENST00000493726 HERVK_113P62684 666 aa9.09□□□□□ -0.95
LRCH3-218ENST00000493726 PRKCZQ05513 592 aa9.09□□□□□ -0.95
LRCH3-218ENST00000493726 ABCB5Q2M3G0 1257 aa9.09□□□□□ -0.95
LRCH3-218ENST00000493726 SLC9C1Q4G0N8 1177 aa9.09□□□□□ -0.95
LRCH3-218ENST00000493726 LLGL2Q6P1M3 1020 aa9.09□□□□□ -0.95
LRCH3-218ENST00000493726 CTR9Q6PD62 1173 aa9.09□□□□□ -0.95
LRCH3-218ENST00000493726 OTUD7AQ8TE49 926 aaPredicted RBP9.09□□□□□ -0.95
LRCH3-218ENST00000493726 GPATCH3Q96I76 525 aa9.09□□□□□ -0.95
LRCH3-218ENST00000493726 CCDC17Q96LX7 622 aa9.09□□□□□ -0.95
LRCH3-218ENST00000493726 P2RX7Q99572 595 aaKnown RBP9.09□□□□□ -0.95
LRCH3-218ENST00000493726 MCM9Q9NXL9 1143 aa9.09□□□□□ -0.95
LRCH3-218ENST00000493726 RBPJLQ9UBG7 517 aa9.09□□□□□ -0.95
LRCH3-218ENST00000493726 PPM1HQ9ULR3 514 aa9.09□□□□□ -0.95
LRCH3-218ENST00000493726 PCDHA4Q9UN74 947 aa9.09□□□□□ -0.95
LRCH3-218ENST00000493726 MYPNQ86TC9 1320 aa9.08□□□□□ -0.96
LRCH3-218ENST00000493726 MYH8P13535 1937 aa9.08□□□□□ -0.96
LRCH3-218ENST00000493726 LAMA3Q16787 3333 aa9.08□□□□□ -0.96
LRCH3-218ENST00000493726 SMIM22K7EJ46 135 aa9.08□□□□□ -0.96
LRCH3-218ENST00000493726 RNF113AO15541 343 aaKnown RBP9.08□□□□□ -0.96
LRCH3-218ENST00000493726 CNMDO75829 334 aa9.08□□□□□ -0.96
LRCH3-218ENST00000493726 CYP2D6P10635 497 aa9.08□□□□□ -0.96
LRCH3-218ENST00000493726 VCAM1P19320 739 aa9.08□□□□□ -0.96
LRCH3-218ENST00000493726 ITIH2P19823 946 aa9.08□□□□□ -0.96
LRCH3-218ENST00000493726 MX1P20591 662 aa9.08□□□□□ -0.96
LRCH3-218ENST00000493726 GRK4P32298 578 aa9.08□□□□□ -0.96
LRCH3-218ENST00000493726 PLCL1Q15111 1095 aa9.08□□□□□ -0.96
LRCH3-218ENST00000493726 CATSPERGQ6ZRH7 1159 aa9.08□□□□□ -0.96
LRCH3-218ENST00000493726 TMEM179Q6ZVK1 233 aa9.08□□□□□ -0.96
LRCH3-218ENST00000493726 ACER1Q8TDN7 264 aa9.08□□□□□ -0.96
LRCH3-218ENST00000493726 SMCR8Q8TEV9 937 aaPredicted RBP9.08□□□□□ -0.96
LRCH3-218ENST00000493726 SHISA4Q96DD7 197 aa9.08□□□□□ -0.96
LRCH3-218ENST00000493726 EPB41L4AQ9HCS5 686 aaPredicted RBP9.08□□□□□ -0.96
LRCH3-218ENST00000493726 TXNRD2Q9NNW7 524 aa9.08□□□□□ -0.96
LRCH3-218ENST00000493726 ARPP21Q9UBL0 812 aaPredicted RBP9.08□□□□□ -0.96
LRCH3-218ENST00000493726 GABRQQ9UN88 632 aa9.08□□□□□ -0.96
LRCH3-218ENST00000493726 TMX2Q9Y320 296 aa9.08□□□□□ -0.96
LRCH3-218ENST00000493726 SAMM50Q9Y512 469 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms