RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 SLC7A5Q01650 507 aa21.57■■□□□ 1.04
RNF40-203ENST00000493683 CC2D1AQ6P1N0 951 aaPredicted RBP21.57■■□□□ 1.04
RNF40-203ENST00000493683 CHMP6Q96FZ7 201 aa21.57■■□□□ 1.04
RNF40-203ENST00000493683 CALB1P05937 261 aa21.56■■□□□ 1.04
RNF40-203ENST00000493683 KSR1Q8IVT5 923 aa21.56■■□□□ 1.04
RNF40-203ENST00000493683 CDK12Q9NYV4 1490 aaPredicted RBP21.56■■□□□ 1.04
RNF40-203ENST00000493683 GPC5P78333 572 aa21.56■■□□□ 1.04
RNF40-203ENST00000493683 TBC1D9BQ66K14 1250 aa21.56■■□□□ 1.04
RNF40-203ENST00000493683 PSMA2P25787 234 aa21.56■■□□□ 1.04
RNF40-203ENST00000493683 ADAM21Q9UKJ8 722 aa21.56■■□□□ 1.04
RNF40-203ENST00000493683 TRIM33Q9UPN9 1127 aa21.56■■□□□ 1.04
RNF40-203ENST00000493683 PALMO75781 387 aa21.56■■□□□ 1.04
RNF40-203ENST00000493683 ATP1A3P13637 1013 aa21.56■■□□□ 1.04
RNF40-203ENST00000493683 POLE2P56282 527 aa21.56■■□□□ 1.04
RNF40-203ENST00000493683 ELAC2Q9BQ52 826 aaKnown RBP21.56■■□□□ 1.04
RNF40-203ENST00000493683 MSTO1Q9BUK6 570 aa21.56■■□□□ 1.04
RNF40-203ENST00000493683 GYG2O15488 501 aa21.56■■□□□ 1.04
RNF40-203ENST00000493683 DDIT3P35638 169 aa21.56■■□□□ 1.04
RNF40-203ENST00000493683 OCRLQ01968 901 aa21.56■■□□□ 1.04
RNF40-203ENST00000493683 TRIP13Q15645 432 aaPredicted RBP21.56■■□□□ 1.04
RNF40-203ENST00000493683 NLRP10Q86W26 655 aa21.56■■□□□ 1.04
RNF40-203ENST00000493683 SPICE1Q8N0Z3 855 aa21.56■■□□□ 1.04
RNF40-203ENST00000493683 PRPF38AQ8NAV1 312 aaKnown RBP21.56■■□□□ 1.04
RNF40-203ENST00000493683 FAF2Q96CS3 445 aa21.56■■□□□ 1.04
RNF40-203ENST00000493683 HEXIM2Q96MH2 286 aaKnown RBP21.56■■□□□ 1.04
RNF40-203ENST00000493683 SAYSD1Q9NPB0 183 aa21.56■■□□□ 1.04
RNF40-203ENST00000493683 ZSCAN20P17040 1043 aaPredicted RBP21.55■■□□□ 1.04
RNF40-203ENST00000493683 TMPRSS15P98073 1019 aa21.55■■□□□ 1.04
RNF40-203ENST00000493683 GRAMD1BQ3KR37 738 aa21.55■■□□□ 1.04
RNF40-203ENST00000493683 TBC1D1Q86TI0 1168 aaPredicted RBP21.55■■□□□ 1.04
RNF40-203ENST00000493683 TMEM35BQ8NCS4 154 aa21.55■■□□□ 1.04
RNF40-203ENST00000493683 CYP26B1Q9NR63 512 aa21.55■■□□□ 1.04
RNF40-203ENST00000493683 DNAJC12Q9UKB3 198 aa21.55■■□□□ 1.04
RNF40-203ENST00000493683 PRKAB2O43741 272 aa21.55■■□□□ 1.04
RNF40-203ENST00000493683 LARGE1O95461 756 aa21.55■■□□□ 1.04
RNF40-203ENST00000493683 ACSL3O95573 720 aa21.55■■□□□ 1.04
RNF40-203ENST00000493683 TSTA3Q13630 321 aaPredicted RBP21.55■■□□□ 1.04
RNF40-203ENST00000493683 ACAD11Q709F0 780 aa21.55■■□□□ 1.04
RNF40-203ENST00000493683 NDUFAF2Q8N183 169 aa21.55■■□□□ 1.04
RNF40-203ENST00000493683 RNF139Q8WU17 664 aa21.55■■□□□ 1.04
RNF40-203ENST00000493683 FAM187AA6NFU0 413 aa21.55■■□□□ 1.04
RNF40-203ENST00000493683 ZRANB2O95218 330 aaKnown RBP eCLIP21.55■■□□□ 1.04
RNF40-203ENST00000493683 SLC16A2P36021 539 aa21.55■■□□□ 1.04
RNF40-203ENST00000493683 CFAP74Q9C0B2 1584 aa21.55■■□□□ 1.04
RNF40-203ENST00000493683 DISP1Q96F81 1524 aa21.55■■□□□ 1.04
RNF40-203ENST00000493683 CIITAP33076 1130 aa21.55■■□□□ 1.04
RNF40-203ENST00000493683 HNRNPH2P55795 449 aaKnown RBP21.55■■□□□ 1.04
RNF40-203ENST00000493683 UBXN2AP68543 259 aa21.55■■□□□ 1.04
RNF40-203ENST00000493683 TSC22D3Q99576 134 aa21.55■■□□□ 1.04
RNF40-203ENST00000493683 ANXA13P27216 316 aa21.54■■□□□ 1.04
RNF40-203ENST00000493683 PMLP29590 882 aa21.54■■□□□ 1.04
RNF40-203ENST00000493683 MCPH1Q8NEM0 835 aa21.54■■□□□ 1.04
RNF40-203ENST00000493683 POLR3CQ9BUI4 534 aaPredicted RBP21.54■■□□□ 1.04
RNF40-203ENST00000493683 GCOM2Q9BZD3 368 aaPredicted RBP21.54■■□□□ 1.04
RNF40-203ENST00000493683 UBN1Q9NPG3 1134 aa21.54■■□□□ 1.04
RNF40-203ENST00000493683 SUCLA2Q9P2R7 463 aaPredicted RBP21.54■■□□□ 1.04
RNF40-203ENST00000493683 GGPS1O95749 300 aa21.54■■□□□ 1.04
RNF40-203ENST00000493683 ARHGDIAP52565 204 aa21.54■■□□□ 1.04
RNF40-203ENST00000493683 PIP4K2CQ8TBX8 421 aa21.54■■□□□ 1.04
RNF40-203ENST00000493683 CEP19Q96LK0 163 aa21.54■■□□□ 1.04
RNF40-203ENST00000493683 NDE1Q9NXR1 346 aa21.54■■□□□ 1.04
RNF40-203ENST00000493683 K7ERI5 159 aa21.54■■□□□ 1.04
RNF40-203ENST00000493683 CFLARO15519 480 aa21.54■■□□□ 1.04
RNF40-203ENST00000493683 CHRNA3P32297 505 aa21.54■■□□□ 1.04
RNF40-203ENST00000493683 ASNSD1Q9NWL6 643 aa21.54■■□□□ 1.04
RNF40-203ENST00000493683 IFNA8P32881 189 aa21.54■■□□□ 1.04
RNF40-203ENST00000493683 MTERF2Q49AM1 385 aa21.54■■□□□ 1.04
RNF40-203ENST00000493683 USP17L2Q6R6M4 530 aa21.54■■□□□ 1.04
RNF40-203ENST00000493683 ARHGAP27Q6ZUM4 889 aa21.54■■□□□ 1.04
RNF40-203ENST00000493683 FAM167AQ96KS9 214 aa21.54■■□□□ 1.04
RNF40-203ENST00000493683 ADAM22Q9P0K1 906 aa21.54■■□□□ 1.04
RNF40-203ENST00000493683 TRPC5Q9UL62 973 aaPredicted RBP21.54■■□□□ 1.04
RNF40-203ENST00000493683 HEG1Q9ULI3 1381 aa21.54■■□□□ 1.04
RNF40-203ENST00000493683 RASA4BC9J798 803 aa21.53■■□□□ 1.04
RNF40-203ENST00000493683 FOXP2O15409 715 aa21.53■■□□□ 1.04
RNF40-203ENST00000493683 RASA4O43374 803 aa21.53■■□□□ 1.04
RNF40-203ENST00000493683 C7orf31Q8N865 590 aa21.53■■□□□ 1.04
RNF40-203ENST00000493683 CFAP73A6NFT4 308 aa21.53■■□□□ 1.04
RNF40-203ENST00000493683 SPDYE2BA6NHP3 402 aa21.53■■□□□ 1.04
RNF40-203ENST00000493683 SPDYE6P0CI01 402 aa21.53■■□□□ 1.04
RNF40-203ENST00000493683 MYBL1P10243 752 aa21.53■■□□□ 1.04
RNF40-203ENST00000493683 MCF2P10911 925 aa21.53■■□□□ 1.04
RNF40-203ENST00000493683 ZNF667Q5HYK9 610 aa21.53■■□□□ 1.04
RNF40-203ENST00000493683 GRAMD1AQ96CP6 724 aa21.53■■□□□ 1.04
RNF40-203ENST00000493683 TNFAIP2Q03169 654 aa21.53■■□□□ 1.04
RNF40-203ENST00000493683 MKRN3Q13064 507 aaKnown RBP21.53■■□□□ 1.04
RNF40-203ENST00000493683 TTC39CQ8N584 583 aa21.53■■□□□ 1.04
RNF40-203ENST00000493683 SLC8A2Q9UPR5 921 aa21.53■■□□□ 1.04
RNF40-203ENST00000493683 NCAPD2Q15021 1401 aa21.53■■□□□ 1.04
RNF40-203ENST00000493683 MYO1CO00159 1063 aa21.53■■□□□ 1.04
RNF40-203ENST00000493683 PFKFB3Q16875 520 aaPredicted RBP21.53■■□□□ 1.04
RNF40-203ENST00000493683 EPM2AIP1Q7L775 607 aaPredicted RBP21.53■■□□□ 1.04
RNF40-203ENST00000493683 SLITRK6Q9H5Y7 841 aa21.53■■□□□ 1.04
RNF40-203ENST00000493683 PPARGC1AQ9UBK2 798 aaKnown RBP21.53■■□□□ 1.04
RNF40-203ENST00000493683 CNOT8Q9UFF9 292 aaKnown RBP21.53■■□□□ 1.04
RNF40-203ENST00000493683 ZBTB1Q9Y2K1 713 aa21.53■■□□□ 1.04
RNF40-203ENST00000493683 ANKARQ7Z5J8 1434 aa21.53■■□□□ 1.04
RNF40-203ENST00000493683 PPP2R2AP63151 447 aa21.52■■□□□ 1.04
RNF40-203ENST00000493683 TMEM179Q6ZVK1 233 aa21.52■■□□□ 1.04
RNF40-203ENST00000493683 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms