RNA–Protein interactions for RNA: ENST00000493518.5

CACUL1-206, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-206ENST00000493518 CASZ1Q86V15 1759 aa16.98■□□□□ 0.31
CACUL1-206ENST00000493518 SHBGP04278 402 aa16.98■□□□□ 0.31
CACUL1-206ENST00000493518 RPSAP08865 295 aaKnown RBP16.98■□□□□ 0.31
CACUL1-206ENST00000493518 VPS41P49754 854 aa16.98■□□□□ 0.31
CACUL1-206ENST00000493518 PDIA5Q14554 519 aa16.98■□□□□ 0.31
CACUL1-206ENST00000493518 LRRC14Q15048 493 aa16.98■□□□□ 0.31
CACUL1-206ENST00000493518 SLC10A5Q5PT55 438 aa16.98■□□□□ 0.31
CACUL1-206ENST00000493518 VPS36Q86VN1 386 aa16.98■□□□□ 0.31
CACUL1-206ENST00000493518 CCDC13Q8IYE1 715 aa16.98■□□□□ 0.31
CACUL1-206ENST00000493518 TPCN2Q8NHX9 752 aa16.98■□□□□ 0.31
CACUL1-206ENST00000493518 WHAMMQ8TF30 809 aa16.98■□□□□ 0.31
CACUL1-206ENST00000493518 GPR75-ASB3A0A0A6YYF3 556 aa16.97■□□□□ 0.31
CACUL1-206ENST00000493518 UBAP1LF5GYI3 381 aa16.97■□□□□ 0.31
CACUL1-206ENST00000493518 CTNND1O60716 968 aaKnown RBP16.97■□□□□ 0.31
CACUL1-206ENST00000493518 NR3C1P04150 777 aa16.97■□□□□ 0.31
CACUL1-206ENST00000493518 GLE1Q53GS7 698 aaKnown RBP16.97■□□□□ 0.31
CACUL1-206ENST00000493518 MICALCLQ6ZW33 695 aa16.97■□□□□ 0.31
CACUL1-206ENST00000493518 PCDHGC5Q9Y5F6 944 aa16.97■□□□□ 0.31
CACUL1-206ENST00000493518 SNED1Q8TER0 1413 aa16.97■□□□□ 0.31
CACUL1-206ENST00000493518 DDX3XO00571 662 aaKnown RBP eCLIP16.97■□□□□ 0.311e-18■■■■□ 20.2
CACUL1-206ENST00000493518 ZBTB5O15062 677 aa16.97■□□□□ 0.31
CACUL1-206ENST00000493518 CFBP00751 764 aa16.97■□□□□ 0.31
CACUL1-206ENST00000493518 EPB41P11171 864 aaKnown RBP16.97■□□□□ 0.31
CACUL1-206ENST00000493518 PPP4CP60510 307 aa16.97■□□□□ 0.31
CACUL1-206ENST00000493518 P2RX7Q99572 595 aaKnown RBP16.97■□□□□ 0.31
CACUL1-206ENST00000493518 NT5C3AQ9H0P0 336 aa16.97■□□□□ 0.31
CACUL1-206ENST00000493518 KCTD10Q9H3F6 313 aa16.97■□□□□ 0.31
CACUL1-206ENST00000493518 LEMD3Q9Y2U8 911 aa16.97■□□□□ 0.31
CACUL1-206ENST00000493518 UTP11Q9Y3A2 253 aaKnown RBP16.97■□□□□ 0.31
CACUL1-206ENST00000493518 TISP43B9A030 160 aa16.96■□□□□ 0.31
CACUL1-206ENST00000493518 EVI5O60447 810 aa16.96■□□□□ 0.31
CACUL1-206ENST00000493518 RPS6KA4O75676 772 aa16.96■□□□□ 0.31
CACUL1-206ENST00000493518 VIMP08670 466 aaKnown RBP16.96■□□□□ 0.31
CACUL1-206ENST00000493518 USP11P51784 963 aa16.96■□□□□ 0.31
CACUL1-206ENST00000493518 SKOR1P84550 965 aa16.96■□□□□ 0.31
CACUL1-206ENST00000493518 PSMD2Q13200 908 aa16.96■□□□□ 0.31
CACUL1-206ENST00000493518 KNOP1Q1ED39 458 aaKnown RBP16.96■□□□□ 0.31
CACUL1-206ENST00000493518 ASPRV1Q53RT3 343 aa16.96■□□□□ 0.31
CACUL1-206ENST00000493518 PNMA8AQ86V59 439 aaPredicted RBP16.96■□□□□ 0.31
CACUL1-206ENST00000493518 CPNE8Q86YQ8 564 aa16.96■□□□□ 0.31
CACUL1-206ENST00000493518 PROM2Q8N271 834 aa16.96■□□□□ 0.31
CACUL1-206ENST00000493518 DDX20Q9UHI6 824 aaKnown RBP16.96■□□□□ 0.31
CACUL1-206ENST00000493518 IGSF9BQ9UPX0 1349 aa16.96■□□□□ 0.31
CACUL1-206ENST00000493518 PLCH1Q4KWH8 1693 aa16.96■□□□□ 0.31
CACUL1-206ENST00000493518 GMNCA6NCL1 334 aa16.96■□□□□ 0.31
CACUL1-206ENST00000493518 CAND2O75155 1236 aa16.96■□□□□ 0.31
CACUL1-206ENST00000493518 PDE6BP35913 854 aa16.96■□□□□ 0.31
CACUL1-206ENST00000493518 KCNJ1P48048 391 aa16.96■□□□□ 0.31
CACUL1-206ENST00000493518 FAM133BQ5BKY9 247 aaKnown RBP16.96■□□□□ 0.31
CACUL1-206ENST00000493518 SLC35G2Q8TBE7 412 aa16.96■□□□□ 0.31
CACUL1-206ENST00000493518 RAPGEF5Q92565 580 aa16.96■□□□□ 0.31
CACUL1-206ENST00000493518 LRRC45Q96CN5 670 aa16.96■□□□□ 0.31
CACUL1-206ENST00000493518 BTBD6Q96KE9 485 aa16.96■□□□□ 0.31
CACUL1-206ENST00000493518 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.96■□□□□ 0.313e-6■□□□□ 9.7
CACUL1-206ENST00000493518 ISCUQ9H1K1 167 aa16.96■□□□□ 0.31
CACUL1-206ENST00000493518 TMBIM4Q9HC24 238 aa16.96■□□□□ 0.31
CACUL1-206ENST00000493518 THRAP3Q9Y2W1 955 aaKnown RBP16.96■□□□□ 0.31
CACUL1-206ENST00000493518 EIF4E1BA6NMX2 242 aaKnown RBP16.96■□□□□ 0.31
CACUL1-206ENST00000493518 FAM13AO94988 1023 aa16.96■□□□□ 0.31
CACUL1-206ENST00000493518 FGFR4P22455 802 aa16.96■□□□□ 0.31
CACUL1-206ENST00000493518 MAP2K2P36507 400 aa16.96■□□□□ 0.31
CACUL1-206ENST00000493518 STAT1P42224 750 aa16.96■□□□□ 0.31
CACUL1-206ENST00000493518 ARHGAP4P98171 946 aa16.96■□□□□ 0.31
CACUL1-206ENST00000493518 SYCP3Q8IZU3 236 aa16.96■□□□□ 0.31
CACUL1-206ENST00000493518 FAM84AQ96KN4 292 aa16.96■□□□□ 0.31
CACUL1-206ENST00000493518 ERVK-5Q9HDB9 667 aa16.96■□□□□ 0.31
CACUL1-206ENST00000493518 AMFRQ9UKV5 643 aa16.96■□□□□ 0.31
CACUL1-206ENST00000493518 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.95■□□□□ 0.3
CACUL1-206ENST00000493518 HMGB1P1B2RPK0 211 aaPredicted RBP16.95■□□□□ 0.3
CACUL1-206ENST00000493518 EEF2P13639 858 aaKnown RBP16.95■□□□□ 0.3
CACUL1-206ENST00000493518 SEPT2Q15019 361 aa16.95■□□□□ 0.3
CACUL1-206ENST00000493518 TRIP13Q15645 432 aaPredicted RBP16.95■□□□□ 0.3
CACUL1-206ENST00000493518 NSMFQ6X4W1 530 aa16.95■□□□□ 0.3
CACUL1-206ENST00000493518 CTNNBL1Q8WYA6 563 aaPredicted RBP16.95■□□□□ 0.3
CACUL1-206ENST00000493518 ARHGEF26Q96DR7 871 aa16.95■□□□□ 0.3
CACUL1-206ENST00000493518 THOC1Q96FV9 657 aaKnown RBP16.95■□□□□ 0.3
CACUL1-206ENST00000493518 DBNDD1Q9H9R9 158 aa16.95■□□□□ 0.3
CACUL1-206ENST00000493518 CTTNBP2NLQ9P2B4 639 aa16.95■□□□□ 0.3
CACUL1-206ENST00000493518 BAIAP2L1Q9UHR4 511 aa16.95■□□□□ 0.3
CACUL1-206ENST00000493518 FAM86B1E9PN63 330 aa16.95■□□□□ 0.3
CACUL1-206ENST00000493518 FAM86B2P0C5J1 330 aa16.95■□□□□ 0.3
CACUL1-206ENST00000493518 MARCKSL1P49006 195 aa16.95■□□□□ 0.3
CACUL1-206ENST00000493518 ITIH3Q06033 890 aa16.95■□□□□ 0.3
CACUL1-206ENST00000493518 GIT2Q14161 759 aa16.95■□□□□ 0.3
CACUL1-206ENST00000493518 MESDQ14696 234 aa16.95■□□□□ 0.3
CACUL1-206ENST00000493518 DRAP1Q14919 205 aaPredicted RBP16.95■□□□□ 0.3
CACUL1-206ENST00000493518 SLFN13Q68D06 897 aa16.95■□□□□ 0.3
CACUL1-206ENST00000493518 HOOK2Q96ED9 719 aa16.95■□□□□ 0.3
CACUL1-206ENST00000493518 ADAM33Q9BZ11 813 aa16.95■□□□□ 0.3
CACUL1-206ENST00000493518 NUCKS1Q9H1E3 243 aaKnown RBP16.95■□□□□ 0.3
CACUL1-206ENST00000493518 A0A1B0GUL6 1792 aa16.95■□□□□ 0.3
CACUL1-206ENST00000493518 CALCAP01258 141 aa16.94■□□□□ 0.3
CACUL1-206ENST00000493518 PRR5LQ6MZQ0 368 aa16.94■□□□□ 0.3
CACUL1-206ENST00000493518 IQCDQ96DY2 449 aa16.94■□□□□ 0.3
CACUL1-206ENST00000493518 THAP2Q9H0W7 228 aa16.94■□□□□ 0.3
CACUL1-206ENST00000493518 DNAJC12Q9UKB3 198 aa16.94■□□□□ 0.3
CACUL1-206ENST00000493518 LRP5O75197 1615 aa16.94■□□□□ 0.3
CACUL1-206ENST00000493518 FAM107AO95990 144 aa16.94■□□□□ 0.3
CACUL1-206ENST00000493518 HOXD13P35453 343 aa16.94■□□□□ 0.3
CACUL1-206ENST00000493518 SNX1Q13596 522 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms