RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 RFC5P40937 340 aa12.88□□□□□ -0.35
LSM2-214ENST00000493387 NDUFA8P51970 172 aa12.88□□□□□ -0.35
LSM2-214ENST00000493387 CHMP4BP1P59074 171 aa12.88□□□□□ -0.35
LSM2-214ENST00000493387 AMPD3Q01432 767 aa12.88□□□□□ -0.35
LSM2-214ENST00000493387 TARBP2Q15633 366 aaKnown RBP12.88□□□□□ -0.35
LSM2-214ENST00000493387 KANK3Q6NY19 840 aa12.88□□□□□ -0.35
LSM2-214ENST00000493387 ANO5Q75V66 913 aa12.88□□□□□ -0.35
LSM2-214ENST00000493387 NECAB2Q7Z6G3 386 aa12.88□□□□□ -0.35
LSM2-214ENST00000493387 CEP57L1Q8IYX8 460 aa12.88□□□□□ -0.35
LSM2-214ENST00000493387 TNS4Q8IZW8 715 aa12.88□□□□□ -0.35
LSM2-214ENST00000493387 PDILTQ8N807 584 aa12.88□□□□□ -0.35
LSM2-214ENST00000493387 PIGOQ8TEQ8 1089 aa12.88□□□□□ -0.35
LSM2-214ENST00000493387 LARP4BQ92615 738 aaKnown RBP12.88□□□□□ -0.35
LSM2-214ENST00000493387 RAD54LQ92698 747 aa12.88□□□□□ -0.35
LSM2-214ENST00000493387 DHX58Q96C10 678 aa12.88□□□□□ -0.35
LSM2-214ENST00000493387 PLIN2Q99541 437 aa12.88□□□□□ -0.35
LSM2-214ENST00000493387 PANK2Q9BZ23 570 aa12.88□□□□□ -0.35
LSM2-214ENST00000493387 C11orf49Q9H6J7 331 aa12.88□□□□□ -0.35
LSM2-214ENST00000493387 BMP2KQ9NSY1 1161 aaPredicted RBP12.88□□□□□ -0.35
LSM2-214ENST00000493387 KCND2Q9NZV8 630 aa12.88□□□□□ -0.35
LSM2-214ENST00000493387 FRMPD3Q5JV73 1810 aa12.88□□□□□ -0.35
LSM2-214ENST00000493387 MROH7Q68CQ1 1323 aa12.88□□□□□ -0.35
LSM2-214ENST00000493387 SCN10AQ9Y5Y9 1956 aa12.87□□□□□ -0.35
LSM2-214ENST00000493387 C17orf102A2RUQ5 167 aa12.87□□□□□ -0.35
LSM2-214ENST00000493387 E9PMD0 336 aa12.87□□□□□ -0.35
LSM2-214ENST00000493387 ARVCFO00192 962 aa12.87□□□□□ -0.35
LSM2-214ENST00000493387 GAS2O43903 313 aaKnown RBP12.87□□□□□ -0.35
LSM2-214ENST00000493387 DGAT1O75907 488 aa12.87□□□□□ -0.35
LSM2-214ENST00000493387 ZNF202O95125 648 aa12.87□□□□□ -0.35
LSM2-214ENST00000493387 RPLP2P05387 115 aaKnown RBP12.87□□□□□ -0.35
LSM2-214ENST00000493387 SLFN14P0C7P3 912 aa12.87□□□□□ -0.35
LSM2-214ENST00000493387 PLA2G4BP0C869 781 aa12.87□□□□□ -0.35
LSM2-214ENST00000493387 COL6A1P12109 1028 aa12.87□□□□□ -0.35
LSM2-214ENST00000493387 RARRES1P49788 294 aa12.87□□□□□ -0.35
LSM2-214ENST00000493387 MNX1P50219 401 aaPredicted RBP12.87□□□□□ -0.35
LSM2-214ENST00000493387 PSMC6P62333 389 aa12.87□□□□□ -0.35
LSM2-214ENST00000493387 TBC1D8BQ0IIM8 1120 aa12.87□□□□□ -0.35
LSM2-214ENST00000493387 GRIK4Q16099 956 aa12.87□□□□□ -0.35
LSM2-214ENST00000493387 E2F4Q16254 413 aa12.87□□□□□ -0.35
LSM2-214ENST00000493387 TPRNQ4KMQ1 711 aa12.87□□□□□ -0.35
LSM2-214ENST00000493387 FAM47CQ5HY64 1035 aa12.87□□□□□ -0.35
LSM2-214ENST00000493387 SV2BQ7L1I2 683 aa12.87□□□□□ -0.35
LSM2-214ENST00000493387 TRMT1LQ7Z2T5 733 aaKnown RBP12.87□□□□□ -0.35
LSM2-214ENST00000493387 SYT2Q8N9I0 419 aaPredicted RBP12.87□□□□□ -0.35
LSM2-214ENST00000493387 SLC43A3Q8NBI5 491 aa12.87□□□□□ -0.35
LSM2-214ENST00000493387 RETREG2Q8NC44 543 aa12.87□□□□□ -0.35
LSM2-214ENST00000493387 TIGD1Q96MW7 591 aa12.87□□□□□ -0.35
LSM2-214ENST00000493387 TIPINQ9BVW5 301 aa12.87□□□□□ -0.35
LSM2-214ENST00000493387 SENP6Q9GZR1 1112 aaPredicted RBP12.87□□□□□ -0.35
LSM2-214ENST00000493387 BHMT2Q9H2M3 363 aa12.87□□□□□ -0.35
LSM2-214ENST00000493387 BLOC1S4Q9NUP1 217 aa12.87□□□□□ -0.35
LSM2-214ENST00000493387 HDAC6Q9UBN7 1215 aa12.87□□□□□ -0.35
LSM2-214ENST00000493387 GTF2IRD1Q9UHL9 959 aa12.87□□□□□ -0.35
LSM2-214ENST00000493387 HOOK1Q9UJC3 728 aaKnown RBP12.87□□□□□ -0.35
LSM2-214ENST00000493387 A0A087X0B3 334 aa12.86□□□□□ -0.35
LSM2-214ENST00000493387 KINO60870 393 aaKnown RBP12.86□□□□□ -0.35
LSM2-214ENST00000493387 MBD3O95983 291 aa12.86□□□□□ -0.35
LSM2-214ENST00000493387 SSBP05455 408 aaKnown RBP eCLIP12.86□□□□□ -0.35
LSM2-214ENST00000493387 EN2P19622 333 aaPredicted RBP12.86□□□□□ -0.35
LSM2-214ENST00000493387 HOXC8P31273 242 aa12.86□□□□□ -0.35
LSM2-214ENST00000493387 NPEPPSP55786 919 aa12.86□□□□□ -0.35
LSM2-214ENST00000493387 MTERF2Q49AM1 385 aa12.86□□□□□ -0.35
LSM2-214ENST00000493387 NAALADL2Q58DX5 795 aa12.86□□□□□ -0.35
LSM2-214ENST00000493387 C1orf53Q5VUE5 145 aa12.86□□□□□ -0.35
LSM2-214ENST00000493387 PLA2G4FQ68DD2 849 aa12.86□□□□□ -0.35
LSM2-214ENST00000493387 PADI6Q6TGC4 694 aa12.86□□□□□ -0.35
LSM2-214ENST00000493387 SLC39A5Q6ZMH5 540 aa12.86□□□□□ -0.35
LSM2-214ENST00000493387 KCNK18Q7Z418 384 aa12.86□□□□□ -0.35
LSM2-214ENST00000493387 FMR1NBQ8N0W7 255 aaPredicted RBP12.86□□□□□ -0.35
LSM2-214ENST00000493387 CNNM3Q8NE01 707 aa12.86□□□□□ -0.35
LSM2-214ENST00000493387 MCPH1Q8NEM0 835 aa12.86□□□□□ -0.35
LSM2-214ENST00000493387 SLC7A3Q8WY07 619 aa12.86□□□□□ -0.35
LSM2-214ENST00000493387 TNMDQ9H2S6 317 aa12.86□□□□□ -0.35
LSM2-214ENST00000493387 GOLPH3LQ9H4A5 285 aa12.86□□□□□ -0.35
LSM2-214ENST00000493387 SETD4Q9NVD3 440 aa12.86□□□□□ -0.35
LSM2-214ENST00000493387 WDR81Q562E7 1941 aa12.86□□□□□ -0.35
LSM2-214ENST00000493387 GRIN2DO15399 1336 aa12.86□□□□□ -0.35
LSM2-214ENST00000493387 KAT6AQ92794 2004 aa12.85□□□□□ -0.35
LSM2-214ENST00000493387 MBLAC1A4D2B0 266 aaPredicted RBP12.85□□□□□ -0.35
LSM2-214ENST00000493387 ZBTB42B2RXF5 422 aa12.85□□□□□ -0.35
LSM2-214ENST00000493387 ZBTB39O15060 712 aa12.85□□□□□ -0.35
LSM2-214ENST00000493387 TLR3O15455 904 aaKnown RBP12.85□□□□□ -0.35
LSM2-214ENST00000493387 MYL1P05976 194 aa12.85□□□□□ -0.35
LSM2-214ENST00000493387 CYP11B2P19099 503 aa12.85□□□□□ -0.35
LSM2-214ENST00000493387 KLRC1P26715 233 aa12.85□□□□□ -0.35
LSM2-214ENST00000493387 TMOD1P28289 359 aa12.85□□□□□ -0.35
LSM2-214ENST00000493387 DNM2P50570 870 aa12.85□□□□□ -0.35
LSM2-214ENST00000493387 CDK7P50613 346 aa12.85□□□□□ -0.35
LSM2-214ENST00000493387 POLGP54098 1239 aaPredicted RBP12.85□□□□□ -0.35
LSM2-214ENST00000493387 SLC12A3P55017 1021 aa12.85□□□□□ -0.35
LSM2-214ENST00000493387 IGBP1P78318 339 aa12.85□□□□□ -0.35
LSM2-214ENST00000493387 ADAM17P78536 824 aa12.85□□□□□ -0.35
LSM2-214ENST00000493387 MCM6Q14566 821 aa12.85□□□□□ -0.35
LSM2-214ENST00000493387 TAF2Q6P1X5 1199 aa12.85□□□□□ -0.35
LSM2-214ENST00000493387 MTHFD1LQ6UB35 978 aa12.85□□□□□ -0.35
LSM2-214ENST00000493387 KRBA2Q6ZNG9 492 aa12.85□□□□□ -0.35
LSM2-214ENST00000493387 ELOA2Q8IYF1 753 aaPredicted RBP12.85□□□□□ -0.35
LSM2-214ENST00000493387 ZNF710Q8N1W2 664 aa12.85□□□□□ -0.35
LSM2-214ENST00000493387 ENGASEQ8NFI3 743 aa12.85□□□□□ -0.35
LSM2-214ENST00000493387 LMBR1Q8WVP7 490 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms