RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 PRR16Q569H4 304 aa16.95■□□□□ 0.3
CDC42SE1-205ENST00000491825 PLA2G4DQ86XP0 818 aa16.95■□□□□ 0.3
CDC42SE1-205ENST00000491825 AGO4Q9HCK5 861 aaKnown RBP16.95■□□□□ 0.3
CDC42SE1-205ENST00000491825 FOXD4L1Q9NU39 408 aa16.95■□□□□ 0.3
CDC42SE1-205ENST00000491825 TUBE1Q9UJT0 475 aa16.95■□□□□ 0.3
CDC42SE1-205ENST00000491825 SIP14410 1827 aa16.94■□□□□ 0.3
CDC42SE1-205ENST00000491825 ARP10275 920 aa16.94■□□□□ 0.3
CDC42SE1-205ENST00000491825 GHRP10912 638 aa16.94■□□□□ 0.3
CDC42SE1-205ENST00000491825 LPIN1Q14693 890 aa16.94■□□□□ 0.3
CDC42SE1-205ENST00000491825 EPC2Q52LR7 807 aa16.94■□□□□ 0.3
CDC42SE1-205ENST00000491825 FBXO22Q8NEZ5 403 aa16.94■□□□□ 0.3
CDC42SE1-205ENST00000491825 SMARCAD1Q9H4L7 1026 aa16.94■□□□□ 0.3
CDC42SE1-205ENST00000491825 RC3H2Q9HBD1 1191 aaKnown RBP16.94■□□□□ 0.3
CDC42SE1-205ENST00000491825 JPH1Q9HDC5 661 aaPredicted RBP16.94■□□□□ 0.3
CDC42SE1-205ENST00000491825 DDX25Q9UHL0 483 aaKnown RBP16.94■□□□□ 0.3
CDC42SE1-205ENST00000491825 VPS37CA5D8V6 355 aaPredicted RBP16.93■□□□□ 0.3
CDC42SE1-205ENST00000491825 IPO5O00410 1097 aaKnown RBP16.93■□□□□ 0.3
CDC42SE1-205ENST00000491825 STX6O43752 255 aa16.93■□□□□ 0.3
CDC42SE1-205ENST00000491825 SLC37A4O43826 429 aa16.93■□□□□ 0.3
CDC42SE1-205ENST00000491825 CCNT1O60563 726 aaKnown RBP16.93■□□□□ 0.3
CDC42SE1-205ENST00000491825 LINC00271P0C7V0 271 aa16.93■□□□□ 0.3
CDC42SE1-205ENST00000491825 ITGB3BPQ13352 177 aaPredicted RBP16.93■□□□□ 0.3
CDC42SE1-205ENST00000491825 BRAPQ7Z569 592 aa16.93■□□□□ 0.3
CDC42SE1-205ENST00000491825 ETNPPLQ8TBG4 499 aa16.93■□□□□ 0.3
CDC42SE1-205ENST00000491825 GLG1Q92896 1179 aa16.93■□□□□ 0.3
CDC42SE1-205ENST00000491825 SAMD11Q96NU1 681 aa16.93■□□□□ 0.3
CDC42SE1-205ENST00000491825 YME1L1Q96TA2 773 aa16.93■□□□□ 0.3
CDC42SE1-205ENST00000491825 ZNF577Q9BSK1 485 aa16.93■□□□□ 0.3
CDC42SE1-205ENST00000491825 KCNMB3Q9NPA1 279 aa16.93■□□□□ 0.3
CDC42SE1-205ENST00000491825 SLC9A2Q9UBY0 812 aa16.93■□□□□ 0.3
CDC42SE1-205ENST00000491825 NOL7Q9UMY1 257 aaKnown RBP16.93■□□□□ 0.3
CDC42SE1-205ENST00000491825 MTMR6Q9Y217 621 aa16.93■□□□□ 0.3
CDC42SE1-205ENST00000491825 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.92■□□□□ 0.3
CDC42SE1-205ENST00000491825 TBX3O15119 743 aa16.92■□□□□ 0.3
CDC42SE1-205ENST00000491825 MSH4O15457 936 aa16.92■□□□□ 0.3
CDC42SE1-205ENST00000491825 UPP2O95045 317 aa16.92■□□□□ 0.3
CDC42SE1-205ENST00000491825 INSRRP14616 1297 aa16.92■□□□□ 0.3
CDC42SE1-205ENST00000491825 ANP32AP39687 249 aaKnown RBP16.92■□□□□ 0.3
CDC42SE1-205ENST00000491825 RILPL1Q5EBL4 403 aa16.92■□□□□ 0.3
CDC42SE1-205ENST00000491825 FBXO47Q5MNV8 452 aa16.92■□□□□ 0.3
CDC42SE1-205ENST00000491825 MCTP1Q6DN14 999 aa16.92■□□□□ 0.3
CDC42SE1-205ENST00000491825 DNAJB3Q8WWF6 145 aa16.92■□□□□ 0.3
CDC42SE1-205ENST00000491825 SLC5A5Q92911 643 aa16.92■□□□□ 0.3
CDC42SE1-205ENST00000491825 ZBTB10Q96DT7 871 aa16.92■□□□□ 0.3
CDC42SE1-205ENST00000491825 MRPL38Q96DV4 380 aaKnown RBP16.92■□□□□ 0.3
CDC42SE1-205ENST00000491825 RIT2Q99578 217 aa16.92■□□□□ 0.3
CDC42SE1-205ENST00000491825 SDF4Q9BRK5 362 aa16.92■□□□□ 0.3
CDC42SE1-205ENST00000491825 UBE2ZQ9H832 354 aaPredicted RBP16.92■□□□□ 0.3
CDC42SE1-205ENST00000491825 TBC1D22BQ9NU19 505 aa16.92■□□□□ 0.3
CDC42SE1-205ENST00000491825 H3BNC9 293 aa16.91■□□□□ 0.3
CDC42SE1-205ENST00000491825 WNT7AO00755 349 aa16.91■□□□□ 0.3
CDC42SE1-205ENST00000491825 DHX15O43143 795 aaKnown RBP16.91■□□□□ 0.3
CDC42SE1-205ENST00000491825 ACTR2P61160 394 aa16.91■□□□□ 0.3
CDC42SE1-205ENST00000491825 TMEM192Q8IY95 271 aa16.91■□□□□ 0.3
CDC42SE1-205ENST00000491825 FAM20AQ96MK3 541 aa16.91■□□□□ 0.3
CDC42SE1-205ENST00000491825 CDY2AQ9Y6F7 541 aa16.91■□□□□ 0.3
CDC42SE1-205ENST00000491825 MYH15Q9Y2K3 1946 aa16.9■□□□□ 0.3
CDC42SE1-205ENST00000491825 NEMFO60524 1076 aa16.9■□□□□ 0.3
CDC42SE1-205ENST00000491825 ATG7O95352 703 aa16.9■□□□□ 0.3
CDC42SE1-205ENST00000491825 COL9A1P20849 921 aa16.9■□□□□ 0.3
CDC42SE1-205ENST00000491825 IGBP1P78318 339 aa16.9■□□□□ 0.3
CDC42SE1-205ENST00000491825 MRPS6P82932 125 aaKnown RBP16.9■□□□□ 0.3
CDC42SE1-205ENST00000491825 PLCB4Q15147 1175 aa16.9■□□□□ 0.3
CDC42SE1-205ENST00000491825 TTC38Q5R3I4 469 aa16.9■□□□□ 0.3
CDC42SE1-205ENST00000491825 RSPH3Q86UC2 560 aa16.9■□□□□ 0.3
CDC42SE1-205ENST00000491825 POTEDQ86YR6 584 aa16.9■□□□□ 0.3
CDC42SE1-205ENST00000491825 LINC01599Q8WXQ3 324 aa16.9■□□□□ 0.3
CDC42SE1-205ENST00000491825 AGO3Q9H9G7 860 aaKnown RBP16.9■□□□□ 0.3
CDC42SE1-205ENST00000491825 BRWD1Q9NSI6 2320 aa16.9■□□□□ 0.3
CDC42SE1-205ENST00000491825 IGKV6D-21A0A0A0MT36 114 aa16.89■□□□□ 0.29
CDC42SE1-205ENST00000491825 RRN3P2A6NIE6 340 aa16.89■□□□□ 0.29
CDC42SE1-205ENST00000491825 CCNE2O96020 404 aa16.89■□□□□ 0.29
CDC42SE1-205ENST00000491825 RPLP2P05387 115 aaKnown RBP16.89■□□□□ 0.29
CDC42SE1-205ENST00000491825 TOB1P50616 345 aaPredicted RBP16.89■□□□□ 0.29
CDC42SE1-205ENST00000491825 KRT76Q01546 638 aa16.89■□□□□ 0.29
CDC42SE1-205ENST00000491825 RESTQ13127 1097 aa16.89■□□□□ 0.29
CDC42SE1-205ENST00000491825 COL19A1Q14993 1142 aa16.89■□□□□ 0.29
CDC42SE1-205ENST00000491825 ZNF746Q6NUN9 644 aaPredicted RBP16.89■□□□□ 0.29
CDC42SE1-205ENST00000491825 TSHZ1Q6ZSZ6 1077 aa16.89■□□□□ 0.29
CDC42SE1-205ENST00000491825 PLPPR4Q7Z2D5 763 aa16.89■□□□□ 0.29
CDC42SE1-205ENST00000491825 SLFN12Q8IYM2 578 aa16.89■□□□□ 0.29
CDC42SE1-205ENST00000491825 CRIPAKQ8N1N5 446 aa16.89■□□□□ 0.29
CDC42SE1-205ENST00000491825 ZSCAN16Q9H4T2 348 aaPredicted RBP16.89■□□□□ 0.29
CDC42SE1-205ENST00000491825 AZI2Q9H6S1 392 aa16.89■□□□□ 0.29
CDC42SE1-205ENST00000491825 TCF20Q9UGU0 1960 aaKnown RBP16.89■□□□□ 0.29
CDC42SE1-205ENST00000491825 ADGRA3Q8IWK6 1321 aa16.89■□□□□ 0.29
CDC42SE1-205ENST00000491825 C5orf67F2Z3F1 127 aa16.88■□□□□ 0.29
CDC42SE1-205ENST00000491825 ENPP3O14638 875 aa16.88■□□□□ 0.29
CDC42SE1-205ENST00000491825 GAS7O60861 476 aa16.88■□□□□ 0.29
CDC42SE1-205ENST00000491825 PSMD10O75832 226 aa16.88■□□□□ 0.29
CDC42SE1-205ENST00000491825 GPM6BQ13491 265 aa16.88■□□□□ 0.29
CDC42SE1-205ENST00000491825 PTPROQ16827 1216 aa16.88■□□□□ 0.29
CDC42SE1-205ENST00000491825 LEXMQ3ZCV2 418 aa16.88■□□□□ 0.29
CDC42SE1-205ENST00000491825 TIGD5Q53EQ6 642 aa16.88■□□□□ 0.29
CDC42SE1-205ENST00000491825 LRCH2Q5VUJ6 765 aa16.88■□□□□ 0.29
CDC42SE1-205ENST00000491825 B3GNT9Q6UX72 402 aa16.88■□□□□ 0.29
CDC42SE1-205ENST00000491825 FERMT3Q86UX7 667 aa16.88■□□□□ 0.29
CDC42SE1-205ENST00000491825 SMAP1Q8IYB5 467 aaPredicted RBP16.88■□□□□ 0.29
CDC42SE1-205ENST00000491825 SPRYD3Q8NCJ5 442 aa16.88■□□□□ 0.29
CDC42SE1-205ENST00000491825 TRAPPC12Q8WVT3 735 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms