RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 SETD4Q9NVD3 440 aa10.53□□□□□ -0.72
BRCA1-219ENST00000491747 KIF28PB7ZC32 967 aa10.52□□□□□ -0.73
BRCA1-219ENST00000491747 TREHO43280 583 aa10.52□□□□□ -0.73
BRCA1-219ENST00000491747 PSMD10O75832 226 aa10.52□□□□□ -0.73
BRCA1-219ENST00000491747 ADAM17P78536 824 aa10.52□□□□□ -0.73
BRCA1-219ENST00000491747 CCDC60Q8IWA6 550 aaPredicted RBP10.52□□□□□ -0.73
BRCA1-219ENST00000491747 DDX25Q9UHL0 483 aaKnown RBP10.52□□□□□ -0.73
BRCA1-219ENST00000491747 SIP14410 1827 aa10.52□□□□□ -0.73
BRCA1-219ENST00000491747 CCNT1O60563 726 aaKnown RBP10.52□□□□□ -0.73
BRCA1-219ENST00000491747 KINO60870 393 aaKnown RBP10.52□□□□□ -0.73
BRCA1-219ENST00000491747 ATP4AP20648 1035 aa10.52□□□□□ -0.73
BRCA1-219ENST00000491747 FPGSQ05932 587 aa10.52□□□□□ -0.73
BRCA1-219ENST00000491747 SHHQ15465 462 aa10.52□□□□□ -0.73
BRCA1-219ENST00000491747 TRIM71Q2Q1W2 868 aaKnown RBP10.52□□□□□ -0.73
BRCA1-219ENST00000491747 PPP4R3AQ6IN85 833 aa10.52□□□□□ -0.73
BRCA1-219ENST00000491747 GLG1Q92896 1179 aa10.52□□□□□ -0.73
BRCA1-219ENST00000491747 ZBTB10Q96DT7 871 aa10.52□□□□□ -0.73
BRCA1-219ENST00000491747 UNC45AQ9H3U1 944 aa10.52□□□□□ -0.73
BRCA1-219ENST00000491747 SMARCAD1Q9H4L7 1026 aa10.52□□□□□ -0.73
BRCA1-219ENST00000491747 BRMS1Q9HCU9 246 aa10.52□□□□□ -0.73
BRCA1-219ENST00000491747 ANO10Q9NW15 660 aa10.52□□□□□ -0.73
BRCA1-219ENST00000491747 RCOR1Q9UKL0 485 aa10.52□□□□□ -0.73
BRCA1-219ENST00000491747 ZNF215Q9UL58 517 aaPredicted RBP10.52□□□□□ -0.73
BRCA1-219ENST00000491747 C17orf102A2RUQ5 167 aa10.51□□□□□ -0.73
BRCA1-219ENST00000491747 ACRP10323 421 aa10.51□□□□□ -0.73
BRCA1-219ENST00000491747 STAT5BP51692 787 aa10.51□□□□□ -0.73
BRCA1-219ENST00000491747 PLCB4Q15147 1175 aa10.51□□□□□ -0.73
BRCA1-219ENST00000491747 PTPN14Q15678 1187 aa10.51□□□□□ -0.73
BRCA1-219ENST00000491747 LRCH2Q5VUJ6 765 aa10.51□□□□□ -0.73
BRCA1-219ENST00000491747 ZNF746Q6NUN9 644 aaPredicted RBP10.51□□□□□ -0.73
BRCA1-219ENST00000491747 SWSAP1Q6NVH7 229 aa10.51□□□□□ -0.73
BRCA1-219ENST00000491747 B3GNT9Q6UX72 402 aa10.51□□□□□ -0.73
BRCA1-219ENST00000491747 POTEDQ86YR6 584 aa10.51□□□□□ -0.73
BRCA1-219ENST00000491747 LMBR1Q8WVP7 490 aa10.51□□□□□ -0.73
BRCA1-219ENST00000491747 HAS1Q92839 578 aa10.51□□□□□ -0.73
BRCA1-219ENST00000491747 RIT2Q99578 217 aa10.51□□□□□ -0.73
BRCA1-219ENST00000491747 NAT10Q9H0A0 1025 aaKnown RBP10.51□□□□□ -0.73
BRCA1-219ENST00000491747 KCNMB3Q9NPA1 279 aa10.51□□□□□ -0.73
BRCA1-219ENST00000491747 ERAP1Q9NZ08 941 aa10.51□□□□□ -0.73
BRCA1-219ENST00000491747 NOD1Q9Y239 953 aa10.51□□□□□ -0.73
BRCA1-219ENST00000491747 TET1Q8NFU7 2136 aa10.51□□□□□ -0.73
BRCA1-219ENST00000491747 SKILP12757 684 aa10.51□□□□□ -0.73
BRCA1-219ENST00000491747 PTK7Q13308 1070 aa10.51□□□□□ -0.73
BRCA1-219ENST00000491747 GPNMBQ14956 572 aa10.51□□□□□ -0.73
BRCA1-219ENST00000491747 MARCH8Q5T0T0 291 aa10.51□□□□□ -0.73
BRCA1-219ENST00000491747 TRAF7Q6Q0C0 670 aa10.51□□□□□ -0.73
BRCA1-219ENST00000491747 PLPPR4Q7Z2D5 763 aa10.51□□□□□ -0.73
BRCA1-219ENST00000491747 SERINC5Q86VE9 423 aa10.51□□□□□ -0.73
BRCA1-219ENST00000491747 TDHQ8IZJ6 230 aa10.51□□□□□ -0.73
BRCA1-219ENST00000491747 AFAP1L1Q8TED9 768 aa10.51□□□□□ -0.73
BRCA1-219ENST00000491747 ZNF592Q92610 1267 aa10.51□□□□□ -0.73
BRCA1-219ENST00000491747 ATP6V0A1Q93050 837 aa10.51□□□□□ -0.73
BRCA1-219ENST00000491747 ZNF396Q96N95 335 aaPredicted RBP10.51□□□□□ -0.73
BRCA1-219ENST00000491747 LOXHD1Q8IVV2 1947 aa10.5□□□□□ -0.73
BRCA1-219ENST00000491747 KIF2AO00139 706 aaPredicted RBP10.5□□□□□ -0.73
BRCA1-219ENST00000491747 CHMP2AO43633 222 aa10.5□□□□□ -0.73
BRCA1-219ENST00000491747 GAS7O60861 476 aa10.5□□□□□ -0.73
BRCA1-219ENST00000491747 IQCF3P0C7M6 154 aa10.5□□□□□ -0.73
BRCA1-219ENST00000491747 KRT76Q01546 638 aa10.5□□□□□ -0.73
BRCA1-219ENST00000491747 CEBPZQ03701 1054 aaKnown RBP10.5□□□□□ -0.73
BRCA1-219ENST00000491747 FAM160A1Q05DH4 1040 aa10.5□□□□□ -0.73
BRCA1-219ENST00000491747 C11orf57Q6ZUT1 292 aaPredicted RBP10.5□□□□□ -0.73
BRCA1-219ENST00000491747 CEP57L1Q8IYX8 460 aa10.5□□□□□ -0.73
BRCA1-219ENST00000491747 TMEM199Q8N511 208 aa10.5□□□□□ -0.73
BRCA1-219ENST00000491747 TRAPPC12Q8WVT3 735 aa10.5□□□□□ -0.73
BRCA1-219ENST00000491747 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.5□□□□□ -0.736e-6■■□□□ 12.9
BRCA1-219ENST00000491747 TEKT3Q9BXF9 490 aa10.5□□□□□ -0.73
BRCA1-219ENST00000491747 AZI2Q9H6S1 392 aa10.5□□□□□ -0.73
BRCA1-219ENST00000491747 ZNF302Q9NR11 478 aa10.5□□□□□ -0.73
BRCA1-219ENST00000491747 EVPLQ92817 2033 aa10.5□□□□□ -0.73
BRCA1-219ENST00000491747 EML1O00423 815 aa10.5□□□□□ -0.73
BRCA1-219ENST00000491747 SOX1O00570 391 aaPredicted RBP10.5□□□□□ -0.73
BRCA1-219ENST00000491747 BACH1O14867 736 aa10.5□□□□□ -0.73
BRCA1-219ENST00000491747 CKBP12277 381 aa10.5□□□□□ -0.73
BRCA1-219ENST00000491747 INSRRP14616 1297 aa10.5□□□□□ -0.73
BRCA1-219ENST00000491747 GCFC2P16383 781 aaKnown RBP10.5□□□□□ -0.73
BRCA1-219ENST00000491747 GSDMDP57764 484 aa10.5□□□□□ -0.73
BRCA1-219ENST00000491747 GABPB1Q06547 395 aaPredicted RBP10.5□□□□□ -0.73
BRCA1-219ENST00000491747 GRIK4Q16099 956 aa10.5□□□□□ -0.73
BRCA1-219ENST00000491747 UGCGQ16739 394 aa10.5□□□□□ -0.73
BRCA1-219ENST00000491747 TMEM240Q5SV17 173 aa10.5□□□□□ -0.73
BRCA1-219ENST00000491747 MIS18BP1Q6P0N0 1132 aa10.5□□□□□ -0.73
BRCA1-219ENST00000491747 RUFY4Q6ZNE9 571 aa10.5□□□□□ -0.73
BRCA1-219ENST00000491747 NYAP1Q6ZVC0 841 aa10.5□□□□□ -0.73
BRCA1-219ENST00000491747 OSBPL7Q9BZF2 842 aa10.5□□□□□ -0.73
BRCA1-219ENST00000491747 FOXP1Q9H334 677 aaPredicted RBP10.5□□□□□ -0.73
BRCA1-219ENST00000491747 DISC1Q9NRI5 854 aa10.5□□□□□ -0.73
BRCA1-219ENST00000491747 GABBR1Q9UBS5 961 aa10.5□□□□□ -0.73
BRCA1-219ENST00000491747 VAV3Q9UKW4 847 aa10.5□□□□□ -0.73
BRCA1-219ENST00000491747 PCDHA10Q9Y5I2 948 aa10.5□□□□□ -0.73
BRCA1-219ENST00000491747 MAFBQ9Y5Q3 323 aaPredicted RBP10.5□□□□□ -0.73
BRCA1-219ENST00000491747 TRIOBPQ9H2D6 2365 aa10.49□□□□□ -0.73
BRCA1-219ENST00000491747 NRCAMQ92823 1304 aa10.49□□□□□ -0.73
BRCA1-219ENST00000491747 LAMA2P24043 3122 aaKnown RBP10.49□□□□□ -0.73
BRCA1-219ENST00000491747 A0A1W2PPC1 479 aa10.49□□□□□ -0.73
BRCA1-219ENST00000491747 PITPNM1O00562 1244 aa10.49□□□□□ -0.73
BRCA1-219ENST00000491747 PSAPP07602 524 aa10.49□□□□□ -0.73
BRCA1-219ENST00000491747 ATP2B1P20020 1258 aa10.49□□□□□ -0.73
BRCA1-219ENST00000491747 IGBP1P78318 339 aa10.49□□□□□ -0.73
BRCA1-219ENST00000491747 RBL2Q08999 1139 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms