RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 TRIM9Q9C026 710 aa24.22■■□□□ 1.47
VCPKMT-204ENST00000491402 BLZF1Q9H2G9 400 aa24.22■■□□□ 1.47
VCPKMT-204ENST00000491402 SPC25Q9HBM1 224 aa24.22■■□□□ 1.47
VCPKMT-204ENST00000491402 SEPT9Q9UHD8 586 aaPredicted RBP24.22■■□□□ 1.47
VCPKMT-204ENST00000491402 MYADML2A6NDP7 307 aa24.21■■□□□ 1.47
VCPKMT-204ENST00000491402 GTPBP6O43824 516 aaPredicted RBP24.21■■□□□ 1.47
VCPKMT-204ENST00000491402 GJA8P48165 433 aa24.21■■□□□ 1.47
VCPKMT-204ENST00000491402 NKX3-2P78367 333 aa24.21■■□□□ 1.47
VCPKMT-204ENST00000491402 DPYDQ12882 1025 aa24.21■■□□□ 1.47
VCPKMT-204ENST00000491402 CUL4BQ13620 913 aa24.21■■□□□ 1.47
VCPKMT-204ENST00000491402 GPBP1Q86WP2 473 aa24.21■■□□□ 1.47
VCPKMT-204ENST00000491402 FAM167AQ96KS9 214 aa24.21■■□□□ 1.47
VCPKMT-204ENST00000491402 SH2D3AQ9BRG2 576 aa24.21■■□□□ 1.47
VCPKMT-204ENST00000491402 ZNF215Q9UL58 517 aaPredicted RBP24.21■■□□□ 1.47
VCPKMT-204ENST00000491402 OGDHLQ9ULD0 1010 aa24.21■■□□□ 1.47
VCPKMT-204ENST00000491402 ARHGEF35A5YM69 484 aa24.21■■□□□ 1.47
VCPKMT-204ENST00000491402 MYMKA6NI61 221 aa24.21■■□□□ 1.47
VCPKMT-204ENST00000491402 CCDC85CA6NKD9 419 aa24.21■■□□□ 1.47
VCPKMT-204ENST00000491402 ADAMTS4O75173 837 aa24.21■■□□□ 1.47
VCPKMT-204ENST00000491402 CYP11B2P19099 503 aa24.21■■□□□ 1.47
VCPKMT-204ENST00000491402 CCDC43Q96MW1 224 aaKnown RBP24.21■■□□□ 1.47
VCPKMT-204ENST00000491402 C7orf25Q9BPX7 421 aa24.21■■□□□ 1.47
VCPKMT-204ENST00000491402 LRRC27Q9C0I9 530 aa24.21■■□□□ 1.47
VCPKMT-204ENST00000491402 CRISPLD2Q9H0B8 497 aa24.21■■□□□ 1.47
VCPKMT-204ENST00000491402 KIAA1468Q9P260 1216 aa24.21■■□□□ 1.47
VCPKMT-204ENST00000491402 H3BRB1 525 aa24.2■■□□□ 1.46
VCPKMT-204ENST00000491402 NPEPPSP55786 919 aa24.2■■□□□ 1.46
VCPKMT-204ENST00000491402 PLCB4Q15147 1175 aa24.2■■□□□ 1.46
VCPKMT-204ENST00000491402 XKR9Q5GH70 373 aa24.2■■□□□ 1.46
VCPKMT-204ENST00000491402 GNASQ5JWF2 1037 aa24.2■■□□□ 1.46
VCPKMT-204ENST00000491402 ATP8B4Q8TF62 1192 aa24.2■■□□□ 1.46
VCPKMT-204ENST00000491402 BBXQ8WY36 941 aaPredicted RBP24.2■■□□□ 1.46
VCPKMT-204ENST00000491402 DDX12PQ92771 950 aa24.2■■□□□ 1.46
VCPKMT-204ENST00000491402 RUSC1Q9BVN2 902 aa24.2■■□□□ 1.46
VCPKMT-204ENST00000491402 TUT1Q9H6E5 874 aaKnown RBP24.2■■□□□ 1.46
VCPKMT-204ENST00000491402 PCDHA5Q9Y5H7 936 aa24.2■■□□□ 1.46
VCPKMT-204ENST00000491402 SYCE3A1L190 88 aa24.19■■□□□ 1.46
VCPKMT-204ENST00000491402 LETM1O95202 739 aaPredicted RBP24.19■■□□□ 1.46
VCPKMT-204ENST00000491402 F2P00734 622 aa24.19■■□□□ 1.46
VCPKMT-204ENST00000491402 ARSHQ5FYA8 562 aa24.19■■□□□ 1.46
VCPKMT-204ENST00000491402 RINT1Q6NUQ1 792 aa24.19■■□□□ 1.46
VCPKMT-204ENST00000491402 CEP170P1Q96L14 293 aa24.19■■□□□ 1.46
VCPKMT-204ENST00000491402 NIFKQ9BYG3 293 aaKnown RBP24.19■■□□□ 1.46
VCPKMT-204ENST00000491402 CYP26B1Q9NR63 512 aa24.19■■□□□ 1.46
VCPKMT-204ENST00000491402 NRBP2Q9NSY0 501 aa24.19■■□□□ 1.46
VCPKMT-204ENST00000491402 LRRC41Q15345 812 aa24.19■■□□□ 1.46
VCPKMT-204ENST00000491402 CNNM4Q6P4Q7 775 aa24.19■■□□□ 1.46
VCPKMT-204ENST00000491402 DYMQ7RTS9 669 aa24.19■■□□□ 1.46
VCPKMT-204ENST00000491402 ARRDC4Q8NCT1 418 aa24.19■■□□□ 1.46
VCPKMT-204ENST00000491402 SPATA20Q8TB22 786 aa24.19■■□□□ 1.46
VCPKMT-204ENST00000491402 RNPEPQ9H4A4 650 aa24.19■■□□□ 1.46
VCPKMT-204ENST00000491402 KCND2Q9NZV8 630 aa24.19■■□□□ 1.46
VCPKMT-204ENST00000491402 PADI6Q6TGC4 694 aa24.18■■□□□ 1.46
VCPKMT-204ENST00000491402 C1orf186Q6ZWK4 172 aa24.18■■□□□ 1.46
VCPKMT-204ENST00000491402 RNF180Q86T96 592 aa24.18■■□□□ 1.46
VCPKMT-204ENST00000491402 BMP2KQ9NSY1 1161 aaPredicted RBP24.18■■□□□ 1.46
VCPKMT-204ENST00000491402 TUBE1Q9UJT0 475 aa24.18■■□□□ 1.46
VCPKMT-204ENST00000491402 TRPC6Q9Y210 931 aa24.18■■□□□ 1.46
VCPKMT-204ENST00000491402 MYL3P08590 195 aa24.17■■□□□ 1.46
VCPKMT-204ENST00000491402 EN2P19622 333 aaPredicted RBP24.17■■□□□ 1.46
VCPKMT-204ENST00000491402 CST5P28325 142 aaPredicted RBP24.17■■□□□ 1.46
VCPKMT-204ENST00000491402 ASIC1P78348 528 aa24.17■■□□□ 1.46
VCPKMT-204ENST00000491402 PURAQ00577 322 aaKnown RBP24.17■■□□□ 1.46
VCPKMT-204ENST00000491402 MTERF2Q49AM1 385 aa24.17■■□□□ 1.46
VCPKMT-204ENST00000491402 NT5DC1Q5TFE4 455 aa24.17■■□□□ 1.46
VCPKMT-204ENST00000491402 KLHDC9Q8NEP7 349 aa24.17■■□□□ 1.46
VCPKMT-204ENST00000491402 KAT2BQ92831 832 aa24.17■■□□□ 1.46
VCPKMT-204ENST00000491402 SMARCE1Q969G3 411 aa24.17■■□□□ 1.46
VCPKMT-204ENST00000491402 KAT6AQ92794 2004 aa24.17■■□□□ 1.46
VCPKMT-204ENST00000491402 MYH11P35749 1972 aa24.16■■□□□ 1.46
VCPKMT-204ENST00000491402 NPHP3-ACAD11A0A0J9YXS1 232 aa24.16■■□□□ 1.46
VCPKMT-204ENST00000491402 SMC2O95347 1197 aa24.16■■□□□ 1.46
VCPKMT-204ENST00000491402 SARSP49591 514 aaKnown RBP24.16■■□□□ 1.46
VCPKMT-204ENST00000491402 RAD51AP2Q09MP3 1159 aa24.16■■□□□ 1.46
VCPKMT-204ENST00000491402 DNAJC19Q96DA6 116 aa24.16■■□□□ 1.46
VCPKMT-204ENST00000491402 ZEB2O60315 1214 aa24.16■■□□□ 1.46
VCPKMT-204ENST00000491402 HBP1O60381 514 aa24.16■■□□□ 1.46
VCPKMT-204ENST00000491402 KPNA6O60684 536 aa24.16■■□□□ 1.46
VCPKMT-204ENST00000491402 USO1O60763 962 aaKnown RBP24.16■■□□□ 1.46
VCPKMT-204ENST00000491402 KRT18P05783 430 aaKnown RBP24.16■■□□□ 1.46
VCPKMT-204ENST00000491402 SOX10P56693 466 aa24.16■■□□□ 1.46
VCPKMT-204ENST00000491402 TARBP2Q15633 366 aaKnown RBP24.16■■□□□ 1.46
VCPKMT-204ENST00000491402 KCNA10Q16322 511 aa24.16■■□□□ 1.46
VCPKMT-204ENST00000491402 GSDMAQ96QA5 445 aa24.16■■□□□ 1.46
VCPKMT-204ENST00000491402 REEP2Q9BRK0 252 aa24.16■■□□□ 1.46
VCPKMT-204ENST00000491402 SCN10AQ9Y5Y9 1956 aa24.15■■□□□ 1.46
VCPKMT-204ENST00000491402 RPN1P04843 607 aaKnown RBP24.15■■□□□ 1.46
VCPKMT-204ENST00000491402 CCSAPQ6IQ19 270 aaPredicted RBP24.15■■□□□ 1.46
VCPKMT-204ENST00000491402 CEP89Q96ST8 783 aa24.15■■□□□ 1.46
VCPKMT-204ENST00000491402 ZBTB42B2RXF5 422 aa24.14■■□□□ 1.46
VCPKMT-204ENST00000491402 KLRC4O43908 158 aa24.14■■□□□ 1.46
VCPKMT-204ENST00000491402 GUCY2CP25092 1073 aa24.14■■□□□ 1.46
VCPKMT-204ENST00000491402 CACNB1Q02641 598 aaPredicted RBP24.14■■□□□ 1.46
VCPKMT-204ENST00000491402 GIT2Q14161 759 aa24.14■■□□□ 1.46
VCPKMT-204ENST00000491402 KIAA0753Q2KHM9 967 aa24.14■■□□□ 1.46
VCPKMT-204ENST00000491402 KATNAL1Q9BW62 490 aa24.14■■□□□ 1.46
VCPKMT-204ENST00000491402 DNAH12Q6ZR08 3092 aa24.14■■□□□ 1.45
VCPKMT-204ENST00000491402 DGAT1O75907 488 aa24.14■■□□□ 1.45
VCPKMT-204ENST00000491402 IDEP14735 1019 aa24.14■■□□□ 1.45
VCPKMT-204ENST00000491402 MNX1P50219 401 aaPredicted RBP24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms