RNA–Protein interactions for RNA: ENST00000491366.5

SEC22A-209, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 482 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-209ENST00000491366 HAUS3Q68CZ6 603 aa21.9■■□□□ 1.1
SEC22A-209ENST00000491366 CHRDL2Q6WN34 429 aa21.9■■□□□ 1.1
SEC22A-209ENST00000491366 LRRC8DQ7L1W4 858 aa21.9■■□□□ 1.1
SEC22A-209ENST00000491366 CATSPER3Q86XQ3 398 aa21.9■■□□□ 1.1
SEC22A-209ENST00000491366 METTL13Q8N6R0 699 aa21.9■■□□□ 1.1
SEC22A-209ENST00000491366 SNX29Q8TEQ0 813 aa21.9■■□□□ 1.1
SEC22A-209ENST00000491366 NIFKQ9BYG3 293 aaKnown RBP21.9■■□□□ 1.1
SEC22A-209ENST00000491366 TUFT1Q9NNX1 390 aa21.9■■□□□ 1.1
SEC22A-209ENST00000491366 ZDHHC9Q9Y397 364 aa21.9■■□□□ 1.1
SEC22A-209ENST00000491366 PCDHA2Q9Y5H9 948 aa21.9■■□□□ 1.1
SEC22A-209ENST00000491366 NPEPPSP55786 919 aa21.89■■□□□ 1.09
SEC22A-209ENST00000491366 TBC1D8BQ0IIM8 1120 aa21.89■■□□□ 1.09
SEC22A-209ENST00000491366 POTEGQ6S5H5 508 aa21.89■■□□□ 1.09
SEC22A-209ENST00000491366 POLR3CQ9BUI4 534 aaPredicted RBP21.89■■□□□ 1.09
SEC22A-209ENST00000491366 UBE2OQ9C0C9 1292 aaKnown RBP21.89■■□□□ 1.09
SEC22A-209ENST00000491366 KAT6AQ92794 2004 aa21.89■■□□□ 1.09
SEC22A-209ENST00000491366 IQCF3P0C7M6 154 aa21.88■■□□□ 1.09
SEC22A-209ENST00000491366 GRIN1Q05586 938 aa21.88■■□□□ 1.09
SEC22A-209ENST00000491366 RBL2Q08999 1139 aa21.88■■□□□ 1.09
SEC22A-209ENST00000491366 TMEM62Q0P6H9 643 aa21.88■■□□□ 1.09
SEC22A-209ENST00000491366 STK38Q15208 465 aa21.88■■□□□ 1.09
SEC22A-209ENST00000491366 TARBP2Q15633 366 aaKnown RBP21.88■■□□□ 1.09
SEC22A-209ENST00000491366 ZRSR1Q15695 479 aaKnown RBP21.88■■□□□ 1.09
SEC22A-209ENST00000491366 XKR9Q5GH70 373 aa21.88■■□□□ 1.09
SEC22A-209ENST00000491366 KRT79Q5XKE5 535 aa21.88■■□□□ 1.09
SEC22A-209ENST00000491366 OTUD6AQ7L8S5 288 aa21.88■■□□□ 1.09
SEC22A-209ENST00000491366 RSPH3Q86UC2 560 aa21.88■■□□□ 1.09
SEC22A-209ENST00000491366 LRRC71Q8N4P6 559 aa21.88■■□□□ 1.09
SEC22A-209ENST00000491366 ZNF579Q8NAF0 562 aaKnown RBP21.88■■□□□ 1.09
SEC22A-209ENST00000491366 PIGOQ8TEQ8 1089 aa21.88■■□□□ 1.09
SEC22A-209ENST00000491366 CEP170P1Q96L14 293 aa21.88■■□□□ 1.09
SEC22A-209ENST00000491366 CCDC43Q96MW1 224 aaKnown RBP21.88■■□□□ 1.09
SEC22A-209ENST00000491366 GDF15Q99988 308 aa21.88■■□□□ 1.09
SEC22A-209ENST00000491366 CYP26B1Q9NR63 512 aa21.88■■□□□ 1.09
SEC22A-209ENST00000491366 SMIM35A0A1B0GVV1 85 aa21.87■■□□□ 1.09
SEC22A-209ENST00000491366 RSPH10B2B2RC85 870 aa21.87■■□□□ 1.09
SEC22A-209ENST00000491366 RBAK-RBAKDNI3L0D1 243 aa21.87■■□□□ 1.09
SEC22A-209ENST00000491366 MAGEB2O15479 319 aa21.87■■□□□ 1.09
SEC22A-209ENST00000491366 LYPLA2O95372 231 aa21.87■■□□□ 1.09
SEC22A-209ENST00000491366 RSPH10BP0C881 870 aa21.87■■□□□ 1.09
SEC22A-209ENST00000491366 ACRP10323 421 aa21.87■■□□□ 1.09
SEC22A-209ENST00000491366 RPA1P27694 616 aa21.87■■□□□ 1.09
SEC22A-209ENST00000491366 PPIGQ13427 754 aaKnown RBP eCLIP21.87■■□□□ 1.09
SEC22A-209ENST00000491366 EFCAB12Q6NXP0 572 aa21.87■■□□□ 1.09
SEC22A-209ENST00000491366 DEFB128Q7Z7B8 93 aa21.87■■□□□ 1.09
SEC22A-209ENST00000491366 SUGCTQ9HAC7 445 aa21.87■■□□□ 1.09
SEC22A-209ENST00000491366 BMP2KQ9NSY1 1161 aaPredicted RBP21.87■■□□□ 1.09
SEC22A-209ENST00000491366 STK24Q9Y6E0 443 aa21.87■■□□□ 1.09
SEC22A-209ENST00000491366 MYH15Q9Y2K3 1946 aa21.86■■□□□ 1.09
SEC22A-209ENST00000491366 CAND2O75155 1236 aa21.86■■□□□ 1.09
SEC22A-209ENST00000491366 NASPP49321 788 aaPredicted RBP21.86■■□□□ 1.09
SEC22A-209ENST00000491366 CLCN3P51790 818 aa21.86■■□□□ 1.09
SEC22A-209ENST00000491366 EPHB4P54760 987 aa21.86■■□□□ 1.09
SEC22A-209ENST00000491366 DNM1Q05193 864 aaKnown RBP21.86■■□□□ 1.09
SEC22A-209ENST00000491366 SLC39A14Q15043 492 aa21.86■■□□□ 1.09
SEC22A-209ENST00000491366 ECM1Q16610 540 aa21.86■■□□□ 1.09
SEC22A-209ENST00000491366 TRAF7Q6Q0C0 670 aa21.86■■□□□ 1.09
SEC22A-209ENST00000491366 PPP1R16BQ96T49 567 aa21.86■■□□□ 1.09
SEC22A-209ENST00000491366 FBXO2Q9UK22 296 aaPredicted RBP21.86■■□□□ 1.09
SEC22A-209ENST00000491366 CEP290O15078 2479 aa21.86■■□□□ 1.09
SEC22A-209ENST00000491366 POLGP54098 1239 aaPredicted RBP21.85■■□□□ 1.09
SEC22A-209ENST00000491366 MRPS6P82932 125 aaKnown RBP21.85■■□□□ 1.09
SEC22A-209ENST00000491366 KIAA0319LQ8IZA0 1049 aa21.85■■□□□ 1.09
SEC22A-209ENST00000491366 NACC1Q96RE7 527 aa21.85■■□□□ 1.09
SEC22A-209ENST00000491366 CEP89Q96ST8 783 aa21.85■■□□□ 1.09
SEC22A-209ENST00000491366 MMTAG2Q9BU76 263 aaKnown RBP21.85■■□□□ 1.09
SEC22A-209ENST00000491366 IL23AQ9NPF7 189 aa21.85■■□□□ 1.09
SEC22A-209ENST00000491366 ANKEF1Q9NU02 776 aa21.85■■□□□ 1.09
SEC22A-209ENST00000491366 DDX19AQ9NUU7 478 aaKnown RBP21.85■■□□□ 1.09
SEC22A-209ENST00000491366 KIAA1024Q9UPX6 916 aa21.85■■□□□ 1.09
SEC22A-209ENST00000491366 TANC1Q9C0D5 1861 aa21.85■■□□□ 1.09
SEC22A-209ENST00000491366 M0QZ92 97 aa21.84■■□□□ 1.09
SEC22A-209ENST00000491366 NCLP19338 710 aaKnown RBP21.84■■□□□ 1.09
SEC22A-209ENST00000491366 TMOD1P28289 359 aa21.84■■□□□ 1.09
SEC22A-209ENST00000491366 RFC2P35250 354 aa21.84■■□□□ 1.09
SEC22A-209ENST00000491366 LONP1P36776 959 aaKnown RBP21.84■■□□□ 1.09
SEC22A-209ENST00000491366 MBTPS1Q14703 1052 aa21.84■■□□□ 1.09
SEC22A-209ENST00000491366 SPECC1Q5M775 1068 aa21.84■■□□□ 1.09
SEC22A-209ENST00000491366 RPAINQ86UA6 219 aa21.84■■□□□ 1.09
SEC22A-209ENST00000491366 LINC00301Q8NCQ3 95 aa21.84■■□□□ 1.09
SEC22A-209ENST00000491366 SLC7A3Q8WY07 619 aa21.84■■□□□ 1.09
SEC22A-209ENST00000491366 CHAMP1Q96JM3 812 aa21.84■■□□□ 1.09
SEC22A-209ENST00000491366 AK8Q96MA6 479 aa21.84■■□□□ 1.09
SEC22A-209ENST00000491366 CLIC6Q96NY7 704 aa21.84■■□□□ 1.09
SEC22A-209ENST00000491366 MAP7D2Q96T17 732 aa21.84■■□□□ 1.09
SEC22A-209ENST00000491366 PLIN2Q99541 437 aa21.84■■□□□ 1.09
SEC22A-209ENST00000491366 CSRNP2Q9H175 543 aa21.84■■□□□ 1.09
SEC22A-209ENST00000491366 COLQQ9Y215 455 aaPredicted RBP21.84■■□□□ 1.09
SEC22A-209ENST00000491366 AKT3Q9Y243 479 aa21.84■■□□□ 1.09
SEC22A-209ENST00000491366 SRPRBQ9Y5M8 271 aaKnown RBP21.84■■□□□ 1.09
SEC22A-209ENST00000491366 CDY2AQ9Y6F7 541 aa21.84■■□□□ 1.09
SEC22A-209ENST00000491366 SPTLC2O15270 562 aa21.83■■□□□ 1.09
SEC22A-209ENST00000491366 NBNO60934 754 aa21.83■■□□□ 1.09
SEC22A-209ENST00000491366 MAFO75444 373 aaPredicted RBP21.83■■□□□ 1.09
SEC22A-209ENST00000491366 CHRNA1P02708 482 aa21.83■■□□□ 1.09
SEC22A-209ENST00000491366 VTNP04004 478 aa21.83■■□□□ 1.09
SEC22A-209ENST00000491366 RPLP2P05387 115 aaKnown RBP21.83■■□□□ 1.09
SEC22A-209ENST00000491366 DDIT3P35638 169 aa21.83■■□□□ 1.09
SEC22A-209ENST00000491366 UBA7P41226 1012 aa21.83■■□□□ 1.09
SEC22A-209ENST00000491366 NUCB2P80303 420 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms