RNA–Protein interactions for RNA: ENST00000490346.1

ECM1-205, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-205ENST00000490346 RSPH3Q86UC2 560 aa10.29□□□□□ -0.76
ECM1-205ENST00000490346 C4orf19Q8IY42 314 aa10.29□□□□□ -0.76
ECM1-205ENST00000490346 RPUSD2Q8IZ73 545 aaKnown RBP10.29□□□□□ -0.76
ECM1-205ENST00000490346 METTL13Q8N6R0 699 aa10.29□□□□□ -0.76
ECM1-205ENST00000490346 NEK9Q8TD19 979 aa10.29□□□□□ -0.76
ECM1-205ENST00000490346 FOXD4L4Q8WXT5 416 aaPredicted RBP10.29□□□□□ -0.76
ECM1-205ENST00000490346 HSD17B14Q9BPX1 270 aa10.29□□□□□ -0.76
ECM1-205ENST00000490346 NIFKQ9BYG3 293 aaKnown RBP10.29□□□□□ -0.76
ECM1-205ENST00000490346 FTOQ9C0B1 505 aaKnown RBP eCLIP10.29□□□□□ -0.76
ECM1-205ENST00000490346 ZSWIM4Q9H7M6 989 aa10.29□□□□□ -0.76
ECM1-205ENST00000490346 EVPLQ92817 2033 aa10.28□□□□□ -0.76
ECM1-205ENST00000490346 A0A087WWV3 80 aa10.28□□□□□ -0.76
ECM1-205ENST00000490346 A0A1W2PPC1 479 aa10.28□□□□□ -0.76
ECM1-205ENST00000490346 ZBTB39O15060 712 aa10.28□□□□□ -0.76
ECM1-205ENST00000490346 MED24O75448 989 aa10.28□□□□□ -0.76
ECM1-205ENST00000490346 CHRNA1P02708 482 aa10.28□□□□□ -0.76
ECM1-205ENST00000490346 YWHABP31946 246 aaKnown RBP10.28□□□□□ -0.76
ECM1-205ENST00000490346 PRPHP41219 470 aa10.28□□□□□ -0.76
ECM1-205ENST00000490346 NPEPPSP55786 919 aa10.28□□□□□ -0.76
ECM1-205ENST00000490346 MRPS6P82932 125 aaKnown RBP10.28□□□□□ -0.76
ECM1-205ENST00000490346 MGAT3Q09327 533 aa10.28□□□□□ -0.76
ECM1-205ENST00000490346 TBC1D8BQ0IIM8 1120 aa10.28□□□□□ -0.76
ECM1-205ENST00000490346 PKP1Q13835 747 aa10.28□□□□□ -0.76
ECM1-205ENST00000490346 BECN1Q14457 450 aa10.28□□□□□ -0.76
ECM1-205ENST00000490346 SF3A1Q15459 793 aaKnown RBP10.28□□□□□ -0.76
ECM1-205ENST00000490346 HABP4Q5JVS0 413 aaKnown RBP10.28□□□□□ -0.76
ECM1-205ENST00000490346 FAM26DQ5JW98 314 aa10.28□□□□□ -0.76
ECM1-205ENST00000490346 DTHD1Q6ZMT9 781 aa10.28□□□□□ -0.76
ECM1-205ENST00000490346 OTOP2Q7RTS6 562 aa10.28□□□□□ -0.76
ECM1-205ENST00000490346 KIAA0319LQ8IZA0 1049 aa10.28□□□□□ -0.76
ECM1-205ENST00000490346 LRRC71Q8N4P6 559 aa10.28□□□□□ -0.76
ECM1-205ENST00000490346 RNPC3Q96LT9 517 aaKnown RBP10.28□□□□□ -0.76
ECM1-205ENST00000490346 OSBPL7Q9BZF2 842 aa10.28□□□□□ -0.76
ECM1-205ENST00000490346 CLIC4Q9Y696 253 aa10.28□□□□□ -0.76
ECM1-205ENST00000490346 CDY2AQ9Y6F7 541 aa10.28□□□□□ -0.76
ECM1-205ENST00000490346 TET1Q8NFU7 2136 aa10.28□□□□□ -0.76
ECM1-205ENST00000490346 SIP14410 1827 aa10.28□□□□□ -0.76
ECM1-205ENST00000490346 VWA3AA6NCI4 1184 aa10.27□□□□□ -0.77
ECM1-205ENST00000490346 PP2D1A8MPX8 630 aa10.27□□□□□ -0.77
ECM1-205ENST00000490346 MAGEB2O15479 319 aa10.27□□□□□ -0.77
ECM1-205ENST00000490346 PARNO95453 639 aaKnown RBP10.27□□□□□ -0.77
ECM1-205ENST00000490346 FGBP02675 491 aa10.27□□□□□ -0.77
ECM1-205ENST00000490346 CXCL10P02778 98 aa10.27□□□□□ -0.77
ECM1-205ENST00000490346 RPLP2P05387 115 aaKnown RBP10.27□□□□□ -0.77
ECM1-205ENST00000490346 PFKMP08237 780 aa10.27□□□□□ -0.77
ECM1-205ENST00000490346 SPATA31C1P0DKV0 1188 aa10.27□□□□□ -0.77
ECM1-205ENST00000490346 CLCN3P51790 818 aa10.27□□□□□ -0.77
ECM1-205ENST00000490346 XKR9Q5GH70 373 aa10.27□□□□□ -0.77
ECM1-205ENST00000490346 IER5Q5VY09 327 aa10.27□□□□□ -0.77
ECM1-205ENST00000490346 EFCAB12Q6NXP0 572 aa10.27□□□□□ -0.77
ECM1-205ENST00000490346 OTUD6AQ7L8S5 288 aa10.27□□□□□ -0.77
ECM1-205ENST00000490346 CATSPER3Q86XQ3 398 aa10.27□□□□□ -0.77
ECM1-205ENST00000490346 IGSF22Q8N9C0 903 aa10.27□□□□□ -0.77
ECM1-205ENST00000490346 ZNF579Q8NAF0 562 aaKnown RBP10.27□□□□□ -0.77
ECM1-205ENST00000490346 ERMNQ8TAM6 284 aa10.27□□□□□ -0.77
ECM1-205ENST00000490346 PIGOQ8TEQ8 1089 aa10.27□□□□□ -0.77
ECM1-205ENST00000490346 HERVK_113Q902F9 699 aa10.27□□□□□ -0.77
ECM1-205ENST00000490346 CEP170P1Q96L14 293 aa10.27□□□□□ -0.77
ECM1-205ENST00000490346 CEP89Q96ST8 783 aa10.27□□□□□ -0.77
ECM1-205ENST00000490346 PPP1R16BQ96T49 567 aa10.27□□□□□ -0.77
ECM1-205ENST00000490346 POLR3CQ9BUI4 534 aaPredicted RBP10.27□□□□□ -0.77
ECM1-205ENST00000490346 RAB34Q9BZG1 259 aa10.27□□□□□ -0.77
ECM1-205ENST00000490346 ZSCAN16Q9H4T2 348 aaPredicted RBP10.27□□□□□ -0.77
ECM1-205ENST00000490346 SUGCTQ9HAC7 445 aa10.27□□□□□ -0.77
ECM1-205ENST00000490346 TUFT1Q9NNX1 390 aa10.27□□□□□ -0.77
ECM1-205ENST00000490346 CYP26B1Q9NR63 512 aa10.27□□□□□ -0.77
ECM1-205ENST00000490346 LRWD1Q9UFC0 647 aa10.27□□□□□ -0.77
ECM1-205ENST00000490346 TRPV2Q9Y5S1 764 aa10.27□□□□□ -0.77
ECM1-205ENST00000490346 ARID2Q68CP9 1835 aa10.27□□□□□ -0.77
ECM1-205ENST00000490346 MYH15Q9Y2K3 1946 aa10.27□□□□□ -0.77
ECM1-205ENST00000490346 M0QZ92 97 aa10.26□□□□□ -0.77
ECM1-205ENST00000490346 LYPLA2O95372 231 aa10.26□□□□□ -0.77
ECM1-205ENST00000490346 BMP15O95972 392 aa10.26□□□□□ -0.77
ECM1-205ENST00000490346 VTNP04004 478 aa10.26□□□□□ -0.77
ECM1-205ENST00000490346 ZSCAN22P10073 491 aaPredicted RBP10.26□□□□□ -0.77
ECM1-205ENST00000490346 GHRP10912 638 aa10.26□□□□□ -0.77
ECM1-205ENST00000490346 ACTN1P12814 892 aa10.26□□□□□ -0.77
ECM1-205ENST00000490346 RPA1P27694 616 aa10.26□□□□□ -0.77
ECM1-205ENST00000490346 TMOD1P28289 359 aa10.26□□□□□ -0.77
ECM1-205ENST00000490346 CDC25AP30304 524 aa10.26□□□□□ -0.77
ECM1-205ENST00000490346 CCT6AP40227 531 aaKnown RBP10.26□□□□□ -0.77
ECM1-205ENST00000490346 CEBPZQ03701 1054 aaKnown RBP10.26□□□□□ -0.77
ECM1-205ENST00000490346 MKRN4PQ13434 485 aaPredicted RBP10.26□□□□□ -0.77
ECM1-205ENST00000490346 DRP2Q13474 957 aa10.26□□□□□ -0.77
ECM1-205ENST00000490346 PDIA5Q14554 519 aa10.26□□□□□ -0.77
ECM1-205ENST00000490346 TCTN1Q2MV58 587 aa10.26□□□□□ -0.77
ECM1-205ENST00000490346 ARL6IP4Q66PJ3 421 aaKnown RBP10.26□□□□□ -0.77
ECM1-205ENST00000490346 HAUS3Q68CZ6 603 aa10.26□□□□□ -0.77
ECM1-205ENST00000490346 POTEGQ6S5H5 508 aa10.26□□□□□ -0.77
ECM1-205ENST00000490346 NME8Q8N427 588 aa10.26□□□□□ -0.77
ECM1-205ENST00000490346 LINC01465Q8N7H1 131 aa10.26□□□□□ -0.77
ECM1-205ENST00000490346 SNX29Q8TEQ0 813 aa10.26□□□□□ -0.77
ECM1-205ENST00000490346 USP28Q96RU2 1077 aa10.26□□□□□ -0.77
ECM1-205ENST00000490346 MAP7D2Q96T17 732 aa10.26□□□□□ -0.77
ECM1-205ENST00000490346 CELF4Q9BZC1 486 aaKnown RBP10.26□□□□□ -0.77
ECM1-205ENST00000490346 BMP2KQ9NSY1 1161 aaPredicted RBP10.26□□□□□ -0.77
ECM1-205ENST00000490346 ANKEF1Q9NU02 776 aa10.26□□□□□ -0.77
ECM1-205ENST00000490346 CXXC1Q9P0U4 656 aaPredicted RBP10.26□□□□□ -0.77
ECM1-205ENST00000490346 AKT3Q9Y243 479 aa10.26□□□□□ -0.77
ECM1-205ENST00000490346 GINS2Q9Y248 185 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms