RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 ZBTB8AQ96BR9 441 aa5.38□□□□□ -1.55
CD46-216ENST00000490278 MAML3Q96JK9 1138 aa5.38□□□□□ -1.55
CD46-216ENST00000490278 WRNIP1Q96S55 665 aa5.38□□□□□ -1.55
CD46-216ENST00000490278 FOXB1Q99853 325 aa5.38□□□□□ -1.55
CD46-216ENST00000490278 ZDHHC5Q9C0B5 715 aa5.38□□□□□ -1.55
CD46-216ENST00000490278 VTA1Q9NP79 307 aa5.38□□□□□ -1.55
CD46-216ENST00000490278 MSRAQ9UJ68 235 aa5.38□□□□□ -1.55
CD46-216ENST00000490278 PMF1-BGLAPU3KQ54 211 aa5.38□□□□□ -1.55
CD46-216ENST00000490278 WASHC2CQ9Y4E1 1318 aa5.38□□□□□ -1.55
CD46-216ENST00000490278 K7ESF4 209 aa5.37□□□□□ -1.55
CD46-216ENST00000490278 PRLP01236 227 aa5.37□□□□□ -1.55
CD46-216ENST00000490278 KRT1P04264 644 aa5.37□□□□□ -1.55
CD46-216ENST00000490278 ECE1P42892 770 aa5.37□□□□□ -1.55
CD46-216ENST00000490278 GLRBP48167 497 aa5.37□□□□□ -1.55
CD46-216ENST00000490278 SLC6A3Q01959 620 aa5.37□□□□□ -1.55
CD46-216ENST00000490278 ROM1Q03395 351 aa5.37□□□□□ -1.55
CD46-216ENST00000490278 ITKQ08881 620 aa5.37□□□□□ -1.55
CD46-216ENST00000490278 RGL3Q3MIN7 710 aa5.37□□□□□ -1.55
CD46-216ENST00000490278 TIGD7Q6NT04 549 aaPredicted RBP5.37□□□□□ -1.55
CD46-216ENST00000490278 CNKSR3Q6P9H4 555 aa5.37□□□□□ -1.55
CD46-216ENST00000490278 FAM129CQ86XR2 697 aa5.37□□□□□ -1.55
CD46-216ENST00000490278 POU5F2Q8N7G0 328 aa5.37□□□□□ -1.55
CD46-216ENST00000490278 BHLHE22Q8NFJ8 381 aaPredicted RBP5.37□□□□□ -1.55
CD46-216ENST00000490278 MTMR8Q96EF0 704 aa5.37□□□□□ -1.55
CD46-216ENST00000490278 AHCYL2Q96HN2 611 aaKnown RBP5.37□□□□□ -1.55
CD46-216ENST00000490278 ZNF496Q96IT1 587 aaPredicted RBP5.37□□□□□ -1.55
CD46-216ENST00000490278 ZSWIM3Q96MP5 696 aa5.37□□□□□ -1.55
CD46-216ENST00000490278 TUBGCP5Q96RT8 1024 aa5.37□□□□□ -1.55
CD46-216ENST00000490278 MENTQ9BUN1 341 aa5.37□□□□□ -1.55
CD46-216ENST00000490278 BTBD2Q9BX70 525 aa5.37□□□□□ -1.55
CD46-216ENST00000490278 AMNQ9BXJ7 453 aa5.37□□□□□ -1.55
CD46-216ENST00000490278 KRTAP4-11Q9BYQ6 195 aa5.37□□□□□ -1.55
CD46-216ENST00000490278 TRIM8Q9BZR9 551 aa5.37□□□□□ -1.55
CD46-216ENST00000490278 ZFP69BQ9UJL9 534 aa5.37□□□□□ -1.55
CD46-216ENST00000490278 LCHNA4D1U4 455 aa5.36□□□□□ -1.55
CD46-216ENST00000490278 CYP7B1O75881 506 aa5.36□□□□□ -1.55
CD46-216ENST00000490278 FBXO21O94952 628 aa5.36□□□□□ -1.55
CD46-216ENST00000490278 PLA2G1BP04054 148 aaKnown RBP5.36□□□□□ -1.55
CD46-216ENST00000490278 HMGB1P09429 215 aaKnown RBP5.36□□□□□ -1.55
CD46-216ENST00000490278 C1QTNF9P0C862 333 aa5.36□□□□□ -1.55
CD46-216ENST00000490278 PI3P19957 117 aa5.36□□□□□ -1.55
CD46-216ENST00000490278 HTRA3P83110 453 aa5.36□□□□□ -1.55
CD46-216ENST00000490278 SMAD4Q13485 552 aaKnown RBP5.36□□□□□ -1.55
CD46-216ENST00000490278 SSPNQ14714 243 aa5.36□□□□□ -1.55
CD46-216ENST00000490278 RTP5Q14D33 572 aa5.36□□□□□ -1.55
CD46-216ENST00000490278 ZNF648Q5T619 568 aaPredicted RBP5.36□□□□□ -1.55
CD46-216ENST00000490278 PHF19Q5T6S3 580 aa5.36□□□□□ -1.55
CD46-216ENST00000490278 PRAMEF9Q5VWM5 478 aa5.36□□□□□ -1.55
CD46-216ENST00000490278 SLFN12LQ6IEE8 588 aa5.36□□□□□ -1.55
CD46-216ENST00000490278 LRSAM1Q6UWE0 723 aa5.36□□□□□ -1.55
CD46-216ENST00000490278 DPP8Q6V1X1 898 aaPredicted RBP5.36□□□□□ -1.55
CD46-216ENST00000490278 ESPNLQ6ZVH7 1005 aa5.36□□□□□ -1.55
CD46-216ENST00000490278 WDR48Q8TAF3 677 aa5.36□□□□□ -1.55
CD46-216ENST00000490278 FNIP1Q8TF40 1166 aa5.36□□□□□ -1.55
CD46-216ENST00000490278 PWWP2AQ96N64 755 aa5.36□□□□□ -1.55
CD46-216ENST00000490278 CEP89Q96ST8 783 aa5.36□□□□□ -1.55
CD46-216ENST00000490278 POFUT1Q9H488 388 aa5.36□□□□□ -1.55
CD46-216ENST00000490278 EPB41L4AQ9HCS5 686 aaPredicted RBP5.36□□□□□ -1.55
CD46-216ENST00000490278 TOPORSQ9NS56 1045 aaPredicted RBP5.36□□□□□ -1.55
CD46-216ENST00000490278 C14orf119Q9NWQ9 140 aa5.36□□□□□ -1.55
CD46-216ENST00000490278 KCNG1Q9UIX4 513 aa5.36□□□□□ -1.55
CD46-216ENST00000490278 CROTQ9UKG9 612 aa5.36□□□□□ -1.55
CD46-216ENST00000490278 CNOT6Q9ULM6 557 aaKnown RBP5.36□□□□□ -1.55
CD46-216ENST00000490278 SMG5Q9UPR3 1016 aaKnown RBP5.36□□□□□ -1.55
CD46-216ENST00000490278 KCTD3Q9Y597 815 aa5.36□□□□□ -1.55
CD46-216ENST00000490278 RFXAPO00287 272 aa5.35□□□□□ -1.55
CD46-216ENST00000490278 PRPF6O94906 941 aaKnown RBP5.35□□□□□ -1.55
CD46-216ENST00000490278 TSPAN15O95858 294 aa5.35□□□□□ -1.55
CD46-216ENST00000490278 IL18BPO95998 194 aa5.35□□□□□ -1.55
CD46-216ENST00000490278 RGS3P49796 1198 aa5.35□□□□□ -1.55
CD46-216ENST00000490278 ERVK-21P61565 698 aa5.35□□□□□ -1.55
CD46-216ENST00000490278 MYBPC3Q14896 1274 aa5.35□□□□□ -1.55
CD46-216ENST00000490278 SYDE2Q5VT97 1194 aa5.35□□□□□ -1.55
CD46-216ENST00000490278 CXorf67Q86X51 503 aaPredicted RBP5.35□□□□□ -1.55
CD46-216ENST00000490278 STPG3Q8N7X2 389 aa5.35□□□□□ -1.55
CD46-216ENST00000490278 TACO1Q9BSH4 297 aaKnown RBP5.35□□□□□ -1.55
CD46-216ENST00000490278 ASPSCR1Q9BZE9 553 aa5.35□□□□□ -1.55
CD46-216ENST00000490278 CCDC8Q9H0W5 538 aaPredicted RBP5.35□□□□□ -1.55
CD46-216ENST00000490278 OR10A5Q9H207 317 aa5.35□□□□□ -1.55
CD46-216ENST00000490278 SEMA4AQ9H3S1 761 aa5.35□□□□□ -1.55
CD46-216ENST00000490278 CD320Q9NPF0 282 aa5.35□□□□□ -1.55
CD46-216ENST00000490278 KCND1Q9NSA2 647 aa5.35□□□□□ -1.55
CD46-216ENST00000490278 TRHDEQ9UKU6 1024 aa5.35□□□□□ -1.55
CD46-216ENST00000490278 WASHC2AQ641Q2 1341 aa5.34□□□□□ -1.55
CD46-216ENST00000490278 GOLGA8AA7E2F4 631 aa5.34□□□□□ -1.55
CD46-216ENST00000490278 GOLGA8BA8MQT2 603 aa5.34□□□□□ -1.55
CD46-216ENST00000490278 APOL3O95236 402 aa5.34□□□□□ -1.55
CD46-216ENST00000490278 CHGBP05060 677 aa5.34□□□□□ -1.55
CD46-216ENST00000490278 APEX1P27695 318 aaKnown RBP5.34□□□□□ -1.55
CD46-216ENST00000490278 IL13RA1P78552 427 aa5.34□□□□□ -1.55
CD46-216ENST00000490278 CAP1Q01518 475 aa5.34□□□□□ -1.55
CD46-216ENST00000490278 ADCY2Q08462 1091 aa5.34□□□□□ -1.55
CD46-216ENST00000490278 PDCD1Q15116 288 aa5.34□□□□□ -1.55
CD46-216ENST00000490278 STILQ15468 1287 aa5.34□□□□□ -1.55
CD46-216ENST00000490278 PKN1Q16512 942 aa5.34□□□□□ -1.55
CD46-216ENST00000490278 PLEKHG6Q3KR16 790 aa5.34□□□□□ -1.55
CD46-216ENST00000490278 ZNF385BQ569K4 471 aa5.34□□□□□ -1.55
CD46-216ENST00000490278 LCE4AQ5TA78 99 aa5.34□□□□□ -1.55
CD46-216ENST00000490278 CXXC5Q7LFL8 322 aaKnown RBP5.34□□□□□ -1.55
CD46-216ENST00000490278 KANSL1Q7Z3B3 1105 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms