RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 PDLIM7Q9NR12 457 aa13.94□□□□□ -0.18
HDAC1-210ENST00000490081 CYP26B1Q9NR63 512 aa13.94□□□□□ -0.18
HDAC1-210ENST00000490081 HDAC6Q9UBN7 1215 aa13.94□□□□□ -0.18
HDAC1-210ENST00000490081 STK17AQ9UEE5 414 aa13.94□□□□□ -0.18
HDAC1-210ENST00000490081 KIAA1024Q9UPX6 916 aa13.94□□□□□ -0.18
HDAC1-210ENST00000490081 COLQQ9Y215 455 aaPredicted RBP13.94□□□□□ -0.18
HDAC1-210ENST00000490081 HPSEQ9Y251 543 aa13.94□□□□□ -0.18
HDAC1-210ENST00000490081 ARID2Q68CP9 1835 aa13.93□□□□□ -0.18
HDAC1-210ENST00000490081 IGKV6-21A0A0C4DH24 114 aa13.93□□□□□ -0.18
HDAC1-210ENST00000490081 C17orf102A2RUQ5 167 aa13.93□□□□□ -0.18
HDAC1-210ENST00000490081 DDX11L8A8MPP1 907 aa13.93□□□□□ -0.18
HDAC1-210ENST00000490081 H0YGN5 161 aa13.93□□□□□ -0.18
HDAC1-210ENST00000490081 GAS2O43903 313 aaKnown RBP13.93□□□□□ -0.18
HDAC1-210ENST00000490081 EYA4O95677 639 aa13.93□□□□□ -0.18
HDAC1-210ENST00000490081 RFC5P40937 340 aa13.93□□□□□ -0.18
HDAC1-210ENST00000490081 RARRES1P49788 294 aa13.93□□□□□ -0.18
HDAC1-210ENST00000490081 PSMC6P62333 389 aa13.93□□□□□ -0.18
HDAC1-210ENST00000490081 PPFIA1Q13136 1202 aa13.93□□□□□ -0.18
HDAC1-210ENST00000490081 GRIK4Q16099 956 aa13.93□□□□□ -0.18
HDAC1-210ENST00000490081 MARCH8Q5T0T0 291 aa13.93□□□□□ -0.18
HDAC1-210ENST00000490081 FAM126BQ8IXS8 530 aa13.93□□□□□ -0.18
HDAC1-210ENST00000490081 DHX33Q9H6R0 707 aaKnown RBP13.93□□□□□ -0.18
HDAC1-210ENST00000490081 DDX19AQ9NUU7 478 aaKnown RBP13.93□□□□□ -0.18
HDAC1-210ENST00000490081 FAM13BQ9NYF5 915 aa13.93□□□□□ -0.18
HDAC1-210ENST00000490081 KCND2Q9NZV8 630 aa13.93□□□□□ -0.18
HDAC1-210ENST00000490081 USP25Q9UHP3 1055 aa13.93□□□□□ -0.18
HDAC1-210ENST00000490081 EVPLQ92817 2033 aa13.92□□□□□ -0.18
HDAC1-210ENST00000490081 MAFO75444 373 aaPredicted RBP13.92□□□□□ -0.18
HDAC1-210ENST00000490081 MARK3P27448 753 aa13.92□□□□□ -0.18
HDAC1-210ENST00000490081 FXR1P51114 621 aaKnown RBP eCLIP13.92□□□□□ -0.18
HDAC1-210ENST00000490081 RBL2Q08999 1139 aa13.92□□□□□ -0.18
HDAC1-210ENST00000490081 E2F4Q16254 413 aa13.92□□□□□ -0.18
HDAC1-210ENST00000490081 NAALADL2Q58DX5 795 aa13.92□□□□□ -0.18
HDAC1-210ENST00000490081 TAF2Q6P1X5 1199 aa13.92□□□□□ -0.18
HDAC1-210ENST00000490081 POTEGQ6S5H5 508 aa13.92□□□□□ -0.18
HDAC1-210ENST00000490081 SERINC5Q86VE9 423 aa13.92□□□□□ -0.18
HDAC1-210ENST00000490081 NME8Q8N427 588 aa13.92□□□□□ -0.18
HDAC1-210ENST00000490081 SYT2Q8N9I0 419 aaPredicted RBP13.92□□□□□ -0.18
HDAC1-210ENST00000490081 IQUBQ8NA54 791 aa13.92□□□□□ -0.18
HDAC1-210ENST00000490081 LMBR1Q8WVP7 490 aa13.92□□□□□ -0.18
HDAC1-210ENST00000490081 CDK5RAP3Q96JB5 506 aa13.92□□□□□ -0.18
HDAC1-210ENST00000490081 CTAGE1Q96RT6 745 aa13.92□□□□□ -0.18
HDAC1-210ENST00000490081 MAGEF1Q9HAY2 307 aa13.92□□□□□ -0.18
HDAC1-210ENST00000490081 GDPD2Q9HCC8 539 aa13.92□□□□□ -0.18
HDAC1-210ENST00000490081 SETD4Q9NVD3 440 aa13.92□□□□□ -0.18
HDAC1-210ENST00000490081 TRPC6Q9Y210 931 aa13.92□□□□□ -0.18
HDAC1-210ENST00000490081 PCDHA2Q9Y5H9 948 aa13.92□□□□□ -0.18
HDAC1-210ENST00000490081 SMIM35A0A1B0GVV1 85 aa13.91□□□□□ -0.18
HDAC1-210ENST00000490081 GOLGA6L4A6NEF3 574 aa13.91□□□□□ -0.18
HDAC1-210ENST00000490081 DCDC2CA8MYV0 355 aa13.91□□□□□ -0.18
HDAC1-210ENST00000490081 ZBTB39O15060 712 aa13.91□□□□□ -0.18
HDAC1-210ENST00000490081 CAND2O75155 1236 aa13.91□□□□□ -0.18
HDAC1-210ENST00000490081 DGAT1O75907 488 aa13.91□□□□□ -0.18
HDAC1-210ENST00000490081 C22orf31O95567 290 aa13.91□□□□□ -0.18
HDAC1-210ENST00000490081 KLRC1P26715 233 aa13.91□□□□□ -0.18
HDAC1-210ENST00000490081 CDC42EP1Q00587 391 aa13.91□□□□□ -0.18
HDAC1-210ENST00000490081 PTK7Q13308 1070 aa13.91□□□□□ -0.18
HDAC1-210ENST00000490081 KARSQ15046 597 aaKnown RBP13.91□□□□□ -0.18
HDAC1-210ENST00000490081 XKR9Q5GH70 373 aa13.91□□□□□ -0.18
HDAC1-210ENST00000490081 SPECC1Q5M775 1068 aa13.91□□□□□ -0.18
HDAC1-210ENST00000490081 RRAGBQ5VZM2 374 aa13.91□□□□□ -0.18
HDAC1-210ENST00000490081 GDF6Q6KF10 455 aaPredicted RBP13.91□□□□□ -0.18
HDAC1-210ENST00000490081 MTHFD1LQ6UB35 978 aa13.91□□□□□ -0.18
HDAC1-210ENST00000490081 FAM43BQ6ZT52 329 aaPredicted RBP13.91□□□□□ -0.18
HDAC1-210ENST00000490081 LINC01465Q8N7H1 131 aa13.91□□□□□ -0.18
HDAC1-210ENST00000490081 CEP170P1Q96L14 293 aa13.91□□□□□ -0.18
HDAC1-210ENST00000490081 HTATIP2Q9BUP3 242 aa13.91□□□□□ -0.18
HDAC1-210ENST00000490081 TIPINQ9BVW5 301 aa13.91□□□□□ -0.18
HDAC1-210ENST00000490081 BLOC1S4Q9NUP1 217 aa13.91□□□□□ -0.18
HDAC1-210ENST00000490081 KCNH3Q9ULD8 1083 aa13.91□□□□□ -0.18
HDAC1-210ENST00000490081 TLR3O15455 904 aaKnown RBP13.9□□□□□ -0.18
HDAC1-210ENST00000490081 CYP11B2P19099 503 aa13.9□□□□□ -0.18
HDAC1-210ENST00000490081 PLCG1P19174 1290 aa13.9□□□□□ -0.18
HDAC1-210ENST00000490081 SLC12A3P55017 1021 aa13.9□□□□□ -0.18
HDAC1-210ENST00000490081 UBE2HP62256 183 aa13.9□□□□□ -0.18
HDAC1-210ENST00000490081 TBC1D8BQ0IIM8 1120 aa13.9□□□□□ -0.18
HDAC1-210ENST00000490081 HIC1Q14526 733 aa13.9□□□□□ -0.18
HDAC1-210ENST00000490081 PTGISQ16647 500 aa13.9□□□□□ -0.18
HDAC1-210ENST00000490081 LRRC26Q2I0M4 334 aa13.9□□□□□ -0.18
HDAC1-210ENST00000490081 CNNM4Q6P4Q7 775 aa13.9□□□□□ -0.18
HDAC1-210ENST00000490081 KCNK18Q7Z418 384 aa13.9□□□□□ -0.18
HDAC1-210ENST00000490081 ELOA2Q8IYF1 753 aaPredicted RBP13.9□□□□□ -0.18
HDAC1-210ENST00000490081 RETREG2Q8NC44 543 aa13.9□□□□□ -0.18
HDAC1-210ENST00000490081 PIGOQ8TEQ8 1089 aa13.9□□□□□ -0.18
HDAC1-210ENST00000490081 MRPS27Q92552 414 aaKnown RBP13.9□□□□□ -0.18
HDAC1-210ENST00000490081 RAD54LQ92698 747 aa13.9□□□□□ -0.18
HDAC1-210ENST00000490081 LRRC27Q9C0I9 530 aa13.9□□□□□ -0.18
HDAC1-210ENST00000490081 PRO3102Q9H379 93 aa13.9□□□□□ -0.18
HDAC1-210ENST00000490081 KBTBD4Q9NVX7 518 aa13.9□□□□□ -0.18
HDAC1-210ENST00000490081 SEPT9Q9UHD8 586 aaPredicted RBP13.9□□□□□ -0.18
HDAC1-210ENST00000490081 TUBE1Q9UJT0 475 aa13.9□□□□□ -0.18
HDAC1-210ENST00000490081 ALPK3Q96L96 1907 aa13.9□□□□□ -0.18
HDAC1-210ENST00000490081 A0A087X0B3 334 aa13.89□□□□□ -0.19
HDAC1-210ENST00000490081 E9PMD0 336 aa13.89□□□□□ -0.19
HDAC1-210ENST00000490081 PITPNM1O00562 1244 aa13.89□□□□□ -0.19
HDAC1-210ENST00000490081 ASAP2O43150 1006 aa13.89□□□□□ -0.19
HDAC1-210ENST00000490081 TREHO43280 583 aa13.89□□□□□ -0.19
HDAC1-210ENST00000490081 B4GALT4O60513 344 aa13.89□□□□□ -0.19
HDAC1-210ENST00000490081 SLFN14P0C7P3 912 aa13.89□□□□□ -0.19
HDAC1-210ENST00000490081 PFKFB1P16118 471 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms