RNA–Protein interactions for RNA: ENST00000490056.5

SFXN5-220, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 906 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-220ENST00000490056 TNPO1Q92973 898 aaKnown RBP18.72■□□□□ 0.59
SFXN5-220ENST00000490056 PNMA5Q96PV4 448 aa18.72■□□□□ 0.59
SFXN5-220ENST00000490056 NIFKQ9BYG3 293 aaKnown RBP18.72■□□□□ 0.59
SFXN5-220ENST00000490056 DDX19AQ9NUU7 478 aaKnown RBP18.72■□□□□ 0.59
SFXN5-220ENST00000490056 NOD1Q9Y239 953 aa18.72■□□□□ 0.59
SFXN5-220ENST00000490056 EVI5O60447 810 aa18.71■□□□□ 0.59
SFXN5-220ENST00000490056 GNAT1P11488 350 aa18.71■□□□□ 0.59
SFXN5-220ENST00000490056 KLRC1P26715 233 aa18.71■□□□□ 0.59
SFXN5-220ENST00000490056 TARBP2Q15633 366 aaKnown RBP18.71■□□□□ 0.59
SFXN5-220ENST00000490056 XKR9Q5GH70 373 aa18.71■□□□□ 0.59
SFXN5-220ENST00000490056 RUFY4Q6ZNE9 571 aa18.71■□□□□ 0.59
SFXN5-220ENST00000490056 SYMPKQ92797 1274 aaKnown RBP18.71■□□□□ 0.59
SFXN5-220ENST00000490056 WNT8BQ93098 351 aa18.71■□□□□ 0.59
SFXN5-220ENST00000490056 SCAND2PQ9GZW5 306 aaPredicted RBP18.71■□□□□ 0.59
SFXN5-220ENST00000490056 TUBE1Q9UJT0 475 aa18.71■□□□□ 0.59
SFXN5-220ENST00000490056 COL1A2P08123 1366 aa18.7■□□□□ 0.58
SFXN5-220ENST00000490056 MBLAC1A4D2B0 266 aaPredicted RBP18.7■□□□□ 0.58
SFXN5-220ENST00000490056 E9PMD0 336 aa18.7■□□□□ 0.58
SFXN5-220ENST00000490056 CLTBP09497 229 aa18.7■□□□□ 0.58
SFXN5-220ENST00000490056 KARSQ15046 597 aaKnown RBP18.7■□□□□ 0.58
SFXN5-220ENST00000490056 TPRNQ4KMQ1 711 aa18.7■□□□□ 0.58
SFXN5-220ENST00000490056 HYIQ5T013 277 aa18.7■□□□□ 0.58
SFXN5-220ENST00000490056 MTHFD1LQ6UB35 978 aa18.7■□□□□ 0.58
SFXN5-220ENST00000490056 OTUD6AQ7L8S5 288 aa18.7■□□□□ 0.58
SFXN5-220ENST00000490056 KCNK18Q7Z418 384 aa18.7■□□□□ 0.58
SFXN5-220ENST00000490056 DHX38Q92620 1227 aaKnown RBP18.7■□□□□ 0.58
SFXN5-220ENST00000490056 CEP170P1Q96L14 293 aa18.7■□□□□ 0.58
SFXN5-220ENST00000490056 NACC1Q96RE7 527 aa18.7■□□□□ 0.58
SFXN5-220ENST00000490056 CEP89Q96ST8 783 aa18.7■□□□□ 0.58
SFXN5-220ENST00000490056 PRDM5Q9NQX1 630 aaPredicted RBP18.7■□□□□ 0.58
SFXN5-220ENST00000490056 PDLIM7Q9NR12 457 aa18.7■□□□□ 0.58
SFXN5-220ENST00000490056 CYP26B1Q9NR63 512 aa18.7■□□□□ 0.58
SFXN5-220ENST00000490056 ANKEF1Q9NU02 776 aa18.7■□□□□ 0.58
SFXN5-220ENST00000490056 TMEM39AQ9NV64 488 aa18.7■□□□□ 0.58
SFXN5-220ENST00000490056 TRIM43BA6NCK2 446 aa18.69■□□□□ 0.58
SFXN5-220ENST00000490056 C22orf31O95567 290 aa18.69■□□□□ 0.58
SFXN5-220ENST00000490056 MUTP22033 750 aa18.69■□□□□ 0.58
SFXN5-220ENST00000490056 SHC4Q6S5L8 630 aa18.69■□□□□ 0.58
SFXN5-220ENST00000490056 SERINC5Q86VE9 423 aa18.69■□□□□ 0.58
SFXN5-220ENST00000490056 LRRC15Q8TF66 581 aa18.69■□□□□ 0.58
SFXN5-220ENST00000490056 TRIM43Q96BQ3 446 aaPredicted RBP18.69■□□□□ 0.58
SFXN5-220ENST00000490056 CDK5RAP3Q96JB5 506 aa18.69■□□□□ 0.58
SFXN5-220ENST00000490056 PANK2Q9BZ23 570 aa18.69■□□□□ 0.58
SFXN5-220ENST00000490056 CCSER1Q9C0I3 900 aa18.69■□□□□ 0.58
SFXN5-220ENST00000490056 KDM3AQ9Y4C1 1321 aa18.69■□□□□ 0.58
SFXN5-220ENST00000490056 EVPLQ92817 2033 aa18.68■□□□□ 0.58
SFXN5-220ENST00000490056 RBAK-RBAKDNI3L0D1 243 aa18.68■□□□□ 0.58
SFXN5-220ENST00000490056 PLCG1P19174 1290 aa18.68■□□□□ 0.58
SFXN5-220ENST00000490056 TBC1D8BQ0IIM8 1120 aa18.68■□□□□ 0.58
SFXN5-220ENST00000490056 PTK7Q13308 1070 aa18.68■□□□□ 0.58
SFXN5-220ENST00000490056 TMEM119Q4V9L6 283 aa18.68■□□□□ 0.58
SFXN5-220ENST00000490056 RASSF8Q8NHQ8 419 aa18.68■□□□□ 0.58
SFXN5-220ENST00000490056 CALML4Q96GE6 196 aa18.68■□□□□ 0.58
SFXN5-220ENST00000490056 FAM49AQ9H0Q0 323 aaPredicted RBP18.68■□□□□ 0.58
SFXN5-220ENST00000490056 BMP2KQ9NSY1 1161 aaPredicted RBP18.68■□□□□ 0.58
SFXN5-220ENST00000490056 TBX21Q9UL17 535 aa18.68■□□□□ 0.58
SFXN5-220ENST00000490056 ZMYND8Q9ULU4 1186 aaPredicted RBP18.68■□□□□ 0.58
SFXN5-220ENST00000490056 MKI67P46013 3256 aaKnown RBP18.67■□□□□ 0.58
SFXN5-220ENST00000490056 A0A087X0B3 334 aa18.67■□□□□ 0.58
SFXN5-220ENST00000490056 XRCC6P12956 609 aaKnown RBP eCLIP18.67■□□□□ 0.58
SFXN5-220ENST00000490056 SYN1P17600 705 aa18.67■□□□□ 0.58
SFXN5-220ENST00000490056 RARRES1P49788 294 aa18.67■□□□□ 0.58
SFXN5-220ENST00000490056 TRIM71Q2Q1W2 868 aaKnown RBP18.67■□□□□ 0.58
SFXN5-220ENST00000490056 LRRC71Q8N4P6 559 aa18.67■□□□□ 0.58
SFXN5-220ENST00000490056 METTL13Q8N6R0 699 aa18.67■□□□□ 0.58
SFXN5-220ENST00000490056 DNAJB3Q8WWF6 145 aa18.67■□□□□ 0.58
SFXN5-220ENST00000490056 NOC4LQ9BVI4 516 aaKnown RBP18.67■□□□□ 0.58
SFXN5-220ENST00000490056 PPP1R12CQ9BZL4 782 aa18.67■□□□□ 0.58
SFXN5-220ENST00000490056 NT5C3AQ9H0P0 336 aa18.67■□□□□ 0.58
SFXN5-220ENST00000490056 BHMT2Q9H2M3 363 aa18.67■□□□□ 0.58
SFXN5-220ENST00000490056 SUGCTQ9HAC7 445 aa18.67■□□□□ 0.58
SFXN5-220ENST00000490056 DBR1Q9UK59 544 aaKnown RBP18.67■□□□□ 0.58
SFXN5-220ENST00000490056 DNM3Q9UQ16 869 aa18.67■□□□□ 0.58
SFXN5-220ENST00000490056 PCDHA2Q9Y5H9 948 aa18.67■□□□□ 0.58
SFXN5-220ENST00000490056 UMODL1Q5DID0 1318 aa18.67■□□□□ 0.58
SFXN5-220ENST00000490056 ARID2Q68CP9 1835 aa18.66■□□□□ 0.58
SFXN5-220ENST00000490056 ARHGEF35A5YM69 484 aa18.66■□□□□ 0.58
SFXN5-220ENST00000490056 KIAA0355O15063 1070 aa18.66■□□□□ 0.58
SFXN5-220ENST00000490056 MAGEB2O15479 319 aa18.66■□□□□ 0.58
SFXN5-220ENST00000490056 SLC26A4O43511 780 aa18.66■□□□□ 0.58
SFXN5-220ENST00000490056 EYA4O95677 639 aa18.66■□□□□ 0.58
SFXN5-220ENST00000490056 ITGB8P26012 769 aa18.66■□□□□ 0.58
SFXN5-220ENST00000490056 TXLNAP40222 546 aa18.66■□□□□ 0.58
SFXN5-220ENST00000490056 CLCN3P51790 818 aa18.66■□□□□ 0.58
SFXN5-220ENST00000490056 RESP18Q5W5W9 173 aa18.66■□□□□ 0.58
SFXN5-220ENST00000490056 EFCAB12Q6NXP0 572 aa18.66■□□□□ 0.58
SFXN5-220ENST00000490056 PDILTQ8N807 584 aa18.66■□□□□ 0.58
SFXN5-220ENST00000490056 CCDC43Q96MW1 224 aaKnown RBP18.66■□□□□ 0.58
SFXN5-220ENST00000490056 HIPK3Q9H422 1215 aa18.66■□□□□ 0.58
SFXN5-220ENST00000490056 SMIM35A0A1B0GVV1 85 aa18.65■□□□□ 0.58
SFXN5-220ENST00000490056 USO1O60763 962 aaKnown RBP18.65■□□□□ 0.58
SFXN5-220ENST00000490056 MAFO75444 373 aaPredicted RBP18.65■□□□□ 0.58
SFXN5-220ENST00000490056 CYP2C18P33260 490 aa18.65■□□□□ 0.58
SFXN5-220ENST00000490056 THPOP40225 353 aa18.65■□□□□ 0.58
SFXN5-220ENST00000490056 POLGP54098 1239 aaPredicted RBP18.65■□□□□ 0.58
SFXN5-220ENST00000490056 MKRN4PQ13434 485 aaPredicted RBP18.65■□□□□ 0.58
SFXN5-220ENST00000490056 DRP2Q13474 957 aa18.65■□□□□ 0.58
SFXN5-220ENST00000490056 RRAGBQ5VZM2 374 aa18.65■□□□□ 0.58
SFXN5-220ENST00000490056 ADALQ6DHV7 355 aa18.65■□□□□ 0.58
SFXN5-220ENST00000490056 KIAA0319LQ8IZA0 1049 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms