RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 SH3TC2Q8TF17 1288 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 PAGR1Q9BTK6 254 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 ARHGAP26Q9UNA1 814 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.48□□□□□ -0.89
LSAMP-205ENST00000490035 A0A1W2PQC6 194 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 ZRANB2O95218 330 aaKnown RBP eCLIP9.48□□□□□ -0.89
LSAMP-205ENST00000490035 ADRA2BP18089 450 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 DHX34Q14147 1143 aaKnown RBP9.48□□□□□ -0.89
LSAMP-205ENST00000490035 CASP8Q14790 479 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 TMEM35BQ8NCS4 154 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 LRFN2Q9ULH4 789 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 PLA2R1Q13018 1463 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 HNRNPRO43390 633 aaKnown RBP9.48□□□□□ -0.89
LSAMP-205ENST00000490035 PFDN1O60925 122 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 ALX1Q15699 326 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 CLIC6Q96NY7 704 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 SLITRK6Q9H5Y7 841 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 FEM1BQ9UK73 627 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 KIF20BQ96Q89 1820 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 CHRNA3P32297 505 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 NNTQ13423 1086 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 DPCR1Q3MIW9 517 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 ERICH1Q86X53 443 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 HPCAL4Q9UM19 191 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 SMAPO00193 183 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 CHUKO15111 745 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 NVLO15381 856 aaKnown RBP9.48□□□□□ -0.89
LSAMP-205ENST00000490035 PHKA1P46020 1223 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 CRKLP46109 303 aaKnown RBP9.48□□□□□ -0.89
LSAMP-205ENST00000490035 HSPA2P54652 639 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 KRT76Q01546 638 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 NLRP10Q86W26 655 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 APOBEC2Q9Y235 224 aaKnown RBP9.48□□□□□ -0.89
LSAMP-205ENST00000490035 PXDNLA1KZ92 1463 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 SNRPFP62306 86 aaKnown RBP9.48□□□□□ -0.89
LSAMP-205ENST00000490035 HOXC10Q9NYD6 342 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 UBE4BO95155 1302 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 MAGEA9P43362 315 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 CCNYQ8ND76 341 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 LMCD1Q9NZU5 365 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 ZHX2Q9Y6X8 837 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 MFAP3LO75121 409 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 AP2B1P63010 937 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 NECTIN1Q15223 517 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 TMED2Q15363 201 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 PI4K2BQ8TCG2 481 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 PAGE5Q96GU1 130 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 EML4Q9HC35 981 aaKnown RBP9.47□□□□□ -0.89
LSAMP-205ENST00000490035 hCG_1642624A0A1W2PR95 340 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 LGALS16A8MUM7 142 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 SPAG7O75391 227 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 RESTQ13127 1097 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 DDX50Q9BQ39 737 aaKnown RBP9.47□□□□□ -0.89
LSAMP-205ENST00000490035 CCDC22O60826 627 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 ABL1P00519 1130 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 GFAPP14136 432 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 LIG3P49916 1009 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 BASP1P80723 227 aaKnown RBP9.47□□□□□ -0.89
LSAMP-205ENST00000490035 PDXDC2PQ6P474 469 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 ALKBH5Q6P6C2 394 aaKnown RBP9.47□□□□□ -0.89
LSAMP-205ENST00000490035 ACAP3Q96P50 834 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 KCND2Q9NZV8 630 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 HDAC4P56524 1084 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 OLFM3Q96PB7 478 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 ANO3Q9BYT9 981 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 GUCY2CP25092 1073 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 MED21Q13503 144 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 ITPRIPL1Q6GPH6 555 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 KIF9Q9HAQ2 790 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 M0R2C6 588 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 MEIS1O00470 390 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 SLC1A1P43005 524 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 KIAA1841Q6NSI8 718 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 KIAA0825Q8IV33 1275 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 CALN1Q9BXU9 219 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 PITPNM3Q9BZ71 974 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 NPHP4O75161 1426 aaPredicted RBP9.47□□□□□ -0.89
LSAMP-205ENST00000490035 ZNF521Q96K83 1311 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 FRMPD1Q5SYB0 1578 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 EIF4A3P38919 411 aaKnown RBP9.47□□□□□ -0.89
LSAMP-205ENST00000490035 NOP14P78316 857 aaKnown RBP9.47□□□□□ -0.89
LSAMP-205ENST00000490035 TFAMQ00059 246 aaKnown RBP9.47□□□□□ -0.89
LSAMP-205ENST00000490035 LRRC31Q6UY01 552 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 CLEC17AQ6ZS10 378 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 FAM133AQ8N9E0 248 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 UBN1Q9NPG3 1134 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 IP6K2Q9UHH9 426 aa9.47□□□□□ -0.89
LSAMP-205ENST00000490035 USP11P51784 963 aa9.46□□□□□ -0.89
LSAMP-205ENST00000490035 RCN2Q14257 317 aa9.46□□□□□ -0.89
LSAMP-205ENST00000490035 LRRC8BQ6P9F7 803 aa9.46□□□□□ -0.89
LSAMP-205ENST00000490035 TMCO5AQ8N6Q1 288 aa9.46□□□□□ -0.89
LSAMP-205ENST00000490035 ALKBH8Q96BT7 664 aaKnown RBP9.46□□□□□ -0.89
LSAMP-205ENST00000490035 PGBD1Q96JS3 809 aa9.46□□□□□ -0.89
LSAMP-205ENST00000490035 ABHD10Q9NUJ1 306 aa9.46□□□□□ -0.89
LSAMP-205ENST00000490035 ZSWIM5Q9P217 1185 aa9.46□□□□□ -0.89
LSAMP-205ENST00000490035 SUCLA2Q9P2R7 463 aaPredicted RBP9.46□□□□□ -0.89
LSAMP-205ENST00000490035 ABCB11O95342 1321 aa9.46□□□□□ -0.89
LSAMP-205ENST00000490035 ARHGAP10A1A4S6 786 aa9.46□□□□□ -0.89
LSAMP-205ENST00000490035 GOLGA8IPA6NC78 632 aa9.46□□□□□ -0.89
LSAMP-205ENST00000490035 PHKA2P46019 1235 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms