RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 SLC39A13Q96H72 371 aa4.24□□□□□ -1.73
DEPDC1-204ENST00000489862 DEPDC7Q96QD5 511 aa4.24□□□□□ -1.73
DEPDC1-204ENST00000489862 CHST12Q9NRB3 414 aa4.24□□□□□ -1.73
DEPDC1-204ENST00000489862 FTSJ1Q9UET6 329 aa4.24□□□□□ -1.73
DEPDC1-204ENST00000489862 DSEQ9UL01 958 aa4.24□□□□□ -1.73
DEPDC1-204ENST00000489862 ZDHHC9Q9Y397 364 aa4.24□□□□□ -1.73
DEPDC1-204ENST00000489862 TCRBV5S4A2TA0A5A2 114 aa4.24□□□□□ -1.73
DEPDC1-204ENST00000489862 FAM47E-STBD1D6RA91 191 aa4.24□□□□□ -1.73
DEPDC1-204ENST00000489862 CENPBP07199 599 aaPredicted RBP4.24□□□□□ -1.73
DEPDC1-204ENST00000489862 GLRBP48167 497 aa4.24□□□□□ -1.73
DEPDC1-204ENST00000489862 EPHB4P54760 987 aa4.24□□□□□ -1.73
DEPDC1-204ENST00000489862 KRTAP10-6P60371 365 aaPredicted RBP4.24□□□□□ -1.73
DEPDC1-204ENST00000489862 SQSTM1Q13501 440 aa4.24□□□□□ -1.73
DEPDC1-204ENST00000489862 MTERF2Q49AM1 385 aa4.24□□□□□ -1.73
DEPDC1-204ENST00000489862 FAM209AQ5JX71 171 aa4.24□□□□□ -1.73
DEPDC1-204ENST00000489862 ARHGEF18Q6ZSZ5 1173 aa4.24□□□□□ -1.73
DEPDC1-204ENST00000489862 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.24□□□□□ -1.73
DEPDC1-204ENST00000489862 KIAA0907Q7Z7F0 614 aaPredicted RBP4.24□□□□□ -1.73
DEPDC1-204ENST00000489862 KBTBD2Q8IY47 623 aa4.24□□□□□ -1.73
DEPDC1-204ENST00000489862 NUDT10Q8NFP7 164 aa4.24□□□□□ -1.73
DEPDC1-204ENST00000489862 SH3RF2Q8TEC5 729 aa4.24□□□□□ -1.73
DEPDC1-204ENST00000489862 ZNF669Q96BR6 464 aaPredicted RBP4.24□□□□□ -1.73
DEPDC1-204ENST00000489862 NUDT11Q96G61 164 aa4.24□□□□□ -1.73
DEPDC1-204ENST00000489862 WRNIP1Q96S55 665 aa4.24□□□□□ -1.73
DEPDC1-204ENST00000489862 DNAJC7Q99615 494 aa4.24□□□□□ -1.73
DEPDC1-204ENST00000489862 CD244Q9BZW8 370 aa4.24□□□□□ -1.73
DEPDC1-204ENST00000489862 NACADO15069 1562 aa4.23□□□□□ -1.73
DEPDC1-204ENST00000489862 ACOT7O00154 380 aa4.23□□□□□ -1.73
DEPDC1-204ENST00000489862 B4GALT4O60513 344 aa4.23□□□□□ -1.73
DEPDC1-204ENST00000489862 DIAPH1O60610 1272 aaKnown RBP4.23□□□□□ -1.73
DEPDC1-204ENST00000489862 CDC45O75419 566 aa4.23□□□□□ -1.73
DEPDC1-204ENST00000489862 ADH4P08319 380 aa4.23□□□□□ -1.73
DEPDC1-204ENST00000489862 MASP1P48740 699 aa4.23□□□□□ -1.73
DEPDC1-204ENST00000489862 PPP2CBP62714 309 aa4.23□□□□□ -1.73
DEPDC1-204ENST00000489862 PPP2CAP67775 309 aa4.23□□□□□ -1.73
DEPDC1-204ENST00000489862 PFKPQ01813 784 aa4.23□□□□□ -1.73
DEPDC1-204ENST00000489862 SSRP1Q08945 709 aaKnown RBP4.23□□□□□ -1.73
DEPDC1-204ENST00000489862 NFATC3Q12968 1075 aa4.23□□□□□ -1.73
DEPDC1-204ENST00000489862 LRRC41Q15345 812 aa4.23□□□□□ -1.73
DEPDC1-204ENST00000489862 SKIDA1Q1XH10 827 aa4.23□□□□□ -1.73
DEPDC1-204ENST00000489862 CD276Q5ZPR3 534 aa4.23□□□□□ -1.73
DEPDC1-204ENST00000489862 ZKSCAN2Q63HK3 967 aa4.23□□□□□ -1.73
DEPDC1-204ENST00000489862 SLFN13Q68D06 897 aa4.23□□□□□ -1.73
DEPDC1-204ENST00000489862 PKN3Q6P5Z2 889 aa4.23□□□□□ -1.73
DEPDC1-204ENST00000489862 KCTD1Q719H9 257 aa4.23□□□□□ -1.73
DEPDC1-204ENST00000489862 LDLRAD3Q86YD5 345 aa4.23□□□□□ -1.73
DEPDC1-204ENST00000489862 MKL1Q969V6 931 aa4.23□□□□□ -1.73
DEPDC1-204ENST00000489862 ZNF764Q96H86 408 aaPredicted RBP4.23□□□□□ -1.73
DEPDC1-204ENST00000489862 CDC6Q99741 560 aa4.23□□□□□ -1.73
DEPDC1-204ENST00000489862 PTPN18Q99952 460 aa4.23□□□□□ -1.73
DEPDC1-204ENST00000489862 ALG1Q9BT22 464 aa4.23□□□□□ -1.73
DEPDC1-204ENST00000489862 MAGEC2Q9UBF1 373 aaPredicted RBP4.23□□□□□ -1.73
DEPDC1-204ENST00000489862 PCDHA8Q9Y5H6 950 aa4.23□□□□□ -1.73
DEPDC1-204ENST00000489862 EID1Q9Y6B2 187 aa4.23□□□□□ -1.73
DEPDC1-204ENST00000489862 TRBV23-1A0A0A0MS06 115 aa4.22□□□□□ -1.73
DEPDC1-204ENST00000489862 A0A0U1RQG5 324 aaPredicted RBP4.22□□□□□ -1.73
DEPDC1-204ENST00000489862 KLHL18O94889 574 aa4.22□□□□□ -1.73
DEPDC1-204ENST00000489862 ENO2P09104 434 aaPredicted RBP4.22□□□□□ -1.73
DEPDC1-204ENST00000489862 FAM153BP0C7A2 387 aa4.22□□□□□ -1.73
DEPDC1-204ENST00000489862 EPHA5P54756 1037 aa4.22□□□□□ -1.73
DEPDC1-204ENST00000489862 RASGRF1Q13972 1273 aa4.22□□□□□ -1.73
DEPDC1-204ENST00000489862 SMAD2Q15796 467 aaKnown RBP4.22□□□□□ -1.73
DEPDC1-204ENST00000489862 DALRD3Q5D0E6 543 aaKnown RBP4.22□□□□□ -1.73
DEPDC1-204ENST00000489862 KLHL36Q8N4N3 616 aa4.22□□□□□ -1.73
DEPDC1-204ENST00000489862 STPG3Q8N7X2 389 aa4.22□□□□□ -1.73
DEPDC1-204ENST00000489862 ZBTB38Q8NAP3 1195 aaPredicted RBP4.22□□□□□ -1.73
DEPDC1-204ENST00000489862 PRPF38AQ8NAV1 312 aaKnown RBP4.22□□□□□ -1.73
DEPDC1-204ENST00000489862 Q8TCH9 128 aa4.22□□□□□ -1.73
DEPDC1-204ENST00000489862 RPS6KC1Q96S38 1066 aa4.22□□□□□ -1.73
DEPDC1-204ENST00000489862 AGAP2Q99490 1192 aa4.22□□□□□ -1.73
DEPDC1-204ENST00000489862 PDGFDQ9GZP0 370 aaPredicted RBP4.22□□□□□ -1.73
DEPDC1-204ENST00000489862 CCDC113Q9H0I3 377 aa4.22□□□□□ -1.73
DEPDC1-204ENST00000489862 BARX1Q9HBU1 254 aaPredicted RBP4.22□□□□□ -1.73
DEPDC1-204ENST00000489862 ARHGAP20Q9P2F6 1191 aa4.22□□□□□ -1.73
DEPDC1-204ENST00000489862 ZFP69BQ9UJL9 534 aa4.22□□□□□ -1.73
DEPDC1-204ENST00000489862 NUB1Q9Y5A7 615 aa4.22□□□□□ -1.73
DEPDC1-204ENST00000489862 MYO15BQ96JP2 1530 aa4.22□□□□□ -1.73
DEPDC1-204ENST00000489862 RB1CC1Q8TDY2 1594 aa4.22□□□□□ -1.73
DEPDC1-204ENST00000489862 FBXO21O94952 628 aa4.21□□□□□ -1.73
DEPDC1-204ENST00000489862 IL18BPO95998 194 aa4.21□□□□□ -1.73
DEPDC1-204ENST00000489862 KNG1P01042 644 aa4.21□□□□□ -1.73
DEPDC1-204ENST00000489862 C6orf222P0C671 652 aaPredicted RBP4.21□□□□□ -1.73
DEPDC1-204ENST00000489862 PAK1Q13153 545 aa4.21□□□□□ -1.73
DEPDC1-204ENST00000489862 FAM50AQ14320 339 aaKnown RBP4.21□□□□□ -1.73
DEPDC1-204ENST00000489862 ZNF362Q5T0B9 420 aaPredicted RBP4.21□□□□□ -1.73
DEPDC1-204ENST00000489862 NBPF6Q5VWK0 638 aa4.21□□□□□ -1.73
DEPDC1-204ENST00000489862 TSHZ1Q6ZSZ6 1077 aa4.21□□□□□ -1.73
DEPDC1-204ENST00000489862 MTDHQ86UE4 582 aaKnown RBP4.21□□□□□ -1.73
DEPDC1-204ENST00000489862 PTPRN2Q92932 1015 aa4.21□□□□□ -1.73
DEPDC1-204ENST00000489862 EXOC2Q96KP1 924 aa4.21□□□□□ -1.73
DEPDC1-204ENST00000489862 NBPF4Q96M43 638 aa4.21□□□□□ -1.73
DEPDC1-204ENST00000489862 SLC39A2Q9NP94 309 aa4.21□□□□□ -1.73
DEPDC1-204ENST00000489862 KCND1Q9NSA2 647 aa4.21□□□□□ -1.73
DEPDC1-204ENST00000489862 ADAM29Q9UKF5 820 aa4.21□□□□□ -1.73
DEPDC1-204ENST00000489862 DMRT1Q9Y5R6 373 aa4.21□□□□□ -1.73
DEPDC1-204ENST00000489862 DCAF1Q9Y4B6 1507 aa4.21□□□□□ -1.74
DEPDC1-204ENST00000489862 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.21□□□□□ -1.74
DEPDC1-204ENST00000489862 ZNF839A8K0R7 811 aa4.21□□□□□ -1.74
DEPDC1-204ENST00000489862 AQP7O14520 342 aa4.21□□□□□ -1.74
DEPDC1-204ENST00000489862 SRGAP2CP0DJJ0 459 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms