RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 ATP1A2P50993 1020 aa17.2■□□□□ 0.34
BRD9-208ENST00000489816 PJA2O43164 708 aa17.19■□□□□ 0.34
BRD9-208ENST00000489816 HLTFQ14527 1009 aaKnown RBP eCLIP17.19■□□□□ 0.34
BRD9-208ENST00000489816 LLGL1Q15334 1064 aa17.19■□□□□ 0.34
BRD9-208ENST00000489816 MMGT1Q8N4V1 131 aa17.19■□□□□ 0.34
BRD9-208ENST00000489816 SLC35C1Q96A29 364 aa17.19■□□□□ 0.34
BRD9-208ENST00000489816 SAMM50Q9Y512 469 aa17.19■□□□□ 0.34
BRD9-208ENST00000489816 MYO3BQ8WXR4 1341 aa17.19■□□□□ 0.34
BRD9-208ENST00000489816 GOLGA6CA6NDK9 693 aa17.19■□□□□ 0.34
BRD9-208ENST00000489816 GOLGA6DP0CG33 693 aa17.19■□□□□ 0.34
BRD9-208ENST00000489816 EPB41P11171 864 aaKnown RBP17.19■□□□□ 0.34
BRD9-208ENST00000489816 MCM3P25205 808 aa17.19■□□□□ 0.34
BRD9-208ENST00000489816 AENQ8WTP8 325 aaKnown RBP17.19■□□□□ 0.34
BRD9-208ENST00000489816 MED4Q9NPJ6 270 aa17.19■□□□□ 0.34
BRD9-208ENST00000489816 ZNF277Q9NRM2 450 aaPredicted RBP17.19■□□□□ 0.34
BRD9-208ENST00000489816 GOLGA6AQ9NYA3 693 aa17.19■□□□□ 0.34
BRD9-208ENST00000489816 ODR4Q5SWX8 454 aa17.18■□□□□ 0.34
BRD9-208ENST00000489816 OTOP1Q7RTM1 612 aa17.18■□□□□ 0.34
BRD9-208ENST00000489816 GLYCTKQ8IVS8 523 aa17.18■□□□□ 0.34
BRD9-208ENST00000489816 AGBL1Q96MI9 1066 aa17.18■□□□□ 0.34
BRD9-208ENST00000489816 NAGPAQ9UK23 515 aa17.18■□□□□ 0.34
BRD9-208ENST00000489816 COPB2P35606 906 aa17.18■□□□□ 0.34
BRD9-208ENST00000489816 PRPF4BQ13523 1007 aaKnown RBP17.18■□□□□ 0.34
BRD9-208ENST00000489816 CC2D2BQ6DHV5 1058 aa17.18■□□□□ 0.34
BRD9-208ENST00000489816 LRRC31Q6UY01 552 aa17.18■□□□□ 0.34
BRD9-208ENST00000489816 IQCDQ96DY2 449 aa17.18■□□□□ 0.34
BRD9-208ENST00000489816 GLT8D2Q9H1C3 349 aa17.18■□□□□ 0.34
BRD9-208ENST00000489816 OSGEPQ9NPF4 335 aa17.18■□□□□ 0.34
BRD9-208ENST00000489816 ANKRD31Q8N7Z5 1873 aa17.18■□□□□ 0.34
BRD9-208ENST00000489816 IGLV3-22A0A075B6J6 115 aa17.18■□□□□ 0.34
BRD9-208ENST00000489816 FRMD3A2A2Y4 597 aa17.18■□□□□ 0.34
BRD9-208ENST00000489816 CALUO43852 315 aaPredicted RBP17.18■□□□□ 0.34
BRD9-208ENST00000489816 EDRF1Q3B7T1 1238 aa17.18■□□□□ 0.34
BRD9-208ENST00000489816 Q4G0T1 1027 aa17.18■□□□□ 0.34
BRD9-208ENST00000489816 SYCP3Q8IZU3 236 aa17.18■□□□□ 0.34
BRD9-208ENST00000489816 HOOK2Q96ED9 719 aa17.18■□□□□ 0.34
BRD9-208ENST00000489816 FAM20AQ96MK3 541 aa17.18■□□□□ 0.34
BRD9-208ENST00000489816 PITPNM2Q9BZ72 1349 aa17.17■□□□□ 0.34
BRD9-208ENST00000489816 SORBS3O60504 671 aa17.17■□□□□ 0.34
BRD9-208ENST00000489816 RPS6KA1Q15418 735 aa17.17■□□□□ 0.34
BRD9-208ENST00000489816 FAM178BQ8IXR5 827 aa17.17■□□□□ 0.34
BRD9-208ENST00000489816 FAM186BQ8IYM0 893 aa17.17■□□□□ 0.34
BRD9-208ENST00000489816 ZSWIM2Q8NEG5 633 aa17.17■□□□□ 0.34
BRD9-208ENST00000489816 TAF4BQ92750 862 aa17.17■□□□□ 0.34
BRD9-208ENST00000489816 AKT1S1Q96B36 256 aa17.17■□□□□ 0.34
BRD9-208ENST00000489816 GMCL1Q96IK5 515 aa17.17■□□□□ 0.34
BRD9-208ENST00000489816 CCDC43Q96MW1 224 aaKnown RBP17.17■□□□□ 0.34
BRD9-208ENST00000489816 MBOAT7Q96N66 472 aa17.17■□□□□ 0.34
BRD9-208ENST00000489816 NAP1L4Q99733 375 aaKnown RBP17.17■□□□□ 0.34
BRD9-208ENST00000489816 ZNF577Q9BSK1 485 aa17.17■□□□□ 0.34
BRD9-208ENST00000489816 TRIM31Q9BZY9 425 aa17.17■□□□□ 0.34
BRD9-208ENST00000489816 DDX47Q9H0S4 455 aaKnown RBP17.17■□□□□ 0.34
BRD9-208ENST00000489816 AIPL1Q9NZN9 384 aa17.17■□□□□ 0.34
BRD9-208ENST00000489816 IRX5P78411 483 aaPredicted RBP17.17■□□□□ 0.34
BRD9-208ENST00000489816 CBWD6Q4V339 395 aa17.17■□□□□ 0.34
BRD9-208ENST00000489816 CBWD3Q5JTY5 395 aa17.17■□□□□ 0.34
BRD9-208ENST00000489816 CBWD5Q5RIA9 395 aa17.17■□□□□ 0.34
BRD9-208ENST00000489816 GBP6Q6ZN66 633 aa17.17■□□□□ 0.34
BRD9-208ENST00000489816 GOLGA5Q8TBA6 731 aa17.17■□□□□ 0.34
BRD9-208ENST00000489816 RUFY1Q96T51 708 aa17.17■□□□□ 0.34
BRD9-208ENST00000489816 LUC7LQ9NQ29 371 aaKnown RBP17.17■□□□□ 0.34
BRD9-208ENST00000489816 SERPINA10Q9UK55 444 aa17.17■□□□□ 0.34
BRD9-208ENST00000489816 TRAF3IP3Q9Y228 551 aa17.17■□□□□ 0.34
BRD9-208ENST00000489816 SHTN1A0MZ66 631 aa17.16■□□□□ 0.34
BRD9-208ENST00000489816 GCOM1H8Y6P7 765 aaPredicted RBP17.16■□□□□ 0.34
BRD9-208ENST00000489816 RAD51CO43502 376 aa17.16■□□□□ 0.34
BRD9-208ENST00000489816 FOSP01100 380 aaPredicted RBP17.16■□□□□ 0.34
BRD9-208ENST00000489816 POLR2MP0CAP2 368 aa17.16■□□□□ 0.34
BRD9-208ENST00000489816 USP8P40818 1118 aa17.16■□□□□ 0.34
BRD9-208ENST00000489816 EPHA7Q15375 998 aa17.16■□□□□ 0.34
BRD9-208ENST00000489816 HSD17B14Q9BPX1 270 aa17.16■□□□□ 0.34
BRD9-208ENST00000489816 TYW1Q9NV66 732 aaKnown RBP17.16■□□□□ 0.34
BRD9-208ENST00000489816 PDXKO00764 312 aa17.16■□□□□ 0.34
BRD9-208ENST00000489816 EYA4O95677 639 aa17.16■□□□□ 0.34
BRD9-208ENST00000489816 ITGA4P13612 1032 aa17.16■□□□□ 0.34
BRD9-208ENST00000489816 EPM2AIP1Q7L775 607 aaPredicted RBP17.16■□□□□ 0.34
BRD9-208ENST00000489816 DAAM2Q86T65 1068 aa17.16■□□□□ 0.34
BRD9-208ENST00000489816 PALB2Q86YC2 1186 aa17.16■□□□□ 0.34
BRD9-208ENST00000489816 RNF10Q8N5U6 811 aaKnown RBP17.16■□□□□ 0.34
BRD9-208ENST00000489816 FAM84AQ96KN4 292 aa17.16■□□□□ 0.34
BRD9-208ENST00000489816 ACP6Q9NPH0 428 aa17.16■□□□□ 0.34
BRD9-208ENST00000489816 TMOD2Q9NZR1 351 aa17.16■□□□□ 0.34
BRD9-208ENST00000489816 MEI1Q5TIA1 1274 aa17.16■□□□□ 0.34
BRD9-208ENST00000489816 GMCL1P1Q8NEA9 526 aa17.16■□□□□ 0.34
BRD9-208ENST00000489816 FAM76AQ8TAV0 307 aa17.16■□□□□ 0.34
BRD9-208ENST00000489816 EDEM3Q9BZQ6 932 aa17.16■□□□□ 0.34
BRD9-208ENST00000489816 UNC45AQ9H3U1 944 aa17.16■□□□□ 0.34
BRD9-208ENST00000489816 RBAK-RBAKDNI3L0D1 243 aa17.15■□□□□ 0.34
BRD9-208ENST00000489816 EVI5O60447 810 aa17.15■□□□□ 0.34
BRD9-208ENST00000489816 RPL13P26373 211 aaKnown RBP17.15■□□□□ 0.34
BRD9-208ENST00000489816 MKRN4PQ13434 485 aaPredicted RBP17.15■□□□□ 0.34
BRD9-208ENST00000489816 DPY19L2P1Q6NXN4 242 aa17.15■□□□□ 0.34
BRD9-208ENST00000489816 FRMD5Q7Z6J6 570 aa17.15■□□□□ 0.34
BRD9-208ENST00000489816 OR2W6PQ8NHA6 318 aa17.15■□□□□ 0.34
BRD9-208ENST00000489816 CASKIN2Q8WXE0 1202 aa17.15■□□□□ 0.34
BRD9-208ENST00000489816 ZIM3Q96PE6 472 aa17.15■□□□□ 0.34
BRD9-208ENST00000489816 NUCKS1Q9H1E3 243 aaKnown RBP17.15■□□□□ 0.34
BRD9-208ENST00000489816 DDX3XO00571 662 aaKnown RBP eCLIP17.15■□□□□ 0.346e-6■■□□□ 14.5
BRD9-208ENST00000489816 PRLRP16471 622 aa17.15■□□□□ 0.34
BRD9-208ENST00000489816 MARSP56192 900 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms