RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 CALCRLQ16602 461 aa21.51■■□□□ 1.03
EPHB4-207ENST00000489808 XKR3Q5GH77 459 aa21.51■■□□□ 1.03
EPHB4-207ENST00000489808 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.51■■□□□ 1.03
EPHB4-207ENST00000489808 APBB2Q92870 758 aa21.51■■□□□ 1.03
EPHB4-207ENST00000489808 CDX2Q99626 313 aaPredicted RBP21.51■■□□□ 1.03
EPHB4-207ENST00000489808 NIFKQ9BYG3 293 aaKnown RBP21.51■■□□□ 1.03
EPHB4-207ENST00000489808 IFIH1Q9BYX4 1025 aaKnown RBP21.51■■□□□ 1.03
EPHB4-207ENST00000489808 CELF4Q9BZC1 486 aaKnown RBP21.51■■□□□ 1.03
EPHB4-207ENST00000489808 KIF3AQ9Y496 699 aa21.51■■□□□ 1.03
EPHB4-207ENST00000489808 TRPV2Q9Y5S1 764 aa21.51■■□□□ 1.03
EPHB4-207ENST00000489808 SQORQ9Y6N5 450 aa21.51■■□□□ 1.03
EPHB4-207ENST00000489808 M0QZ92 97 aa21.5■■□□□ 1.03
EPHB4-207ENST00000489808 P4HBP07237 508 aaKnown RBP21.5■■□□□ 1.03
EPHB4-207ENST00000489808 SPIRE1Q08AE8 756 aa21.5■■□□□ 1.03
EPHB4-207ENST00000489808 EPHA7Q15375 998 aa21.5■■□□□ 1.03
EPHB4-207ENST00000489808 TARBP2Q15633 366 aaKnown RBP21.5■■□□□ 1.03
EPHB4-207ENST00000489808 BANK1Q8NDB2 785 aa21.5■■□□□ 1.03
EPHB4-207ENST00000489808 MTMR9Q96QG7 549 aa21.5■■□□□ 1.03
EPHB4-207ENST00000489808 SLC28A3Q9HAS3 691 aa21.5■■□□□ 1.03
EPHB4-207ENST00000489808 PCDHA12Q9UN75 941 aa21.5■■□□□ 1.03
EPHB4-207ENST00000489808 TANC1Q9C0D5 1861 aa21.49■■□□□ 1.03
EPHB4-207ENST00000489808 DDX11L8A8MPP1 907 aa21.49■■□□□ 1.03
EPHB4-207ENST00000489808 QARSP47897 775 aaKnown RBP21.49■■□□□ 1.03
EPHB4-207ENST00000489808 GNL2Q13823 731 aaKnown RBP21.49■■□□□ 1.03
EPHB4-207ENST00000489808 GRIN2CQ14957 1233 aa21.49■■□□□ 1.03
EPHB4-207ENST00000489808 EFCAB12Q6NXP0 572 aa21.49■■□□□ 1.03
EPHB4-207ENST00000489808 TMCO2Q7Z6W1 182 aaPredicted RBP21.49■■□□□ 1.03
EPHB4-207ENST00000489808 NOSTRINQ8IVI9 506 aa21.49■■□□□ 1.03
EPHB4-207ENST00000489808 METTL13Q8N6R0 699 aa21.49■■□□□ 1.03
EPHB4-207ENST00000489808 USP38Q8NB14 1042 aa21.49■■□□□ 1.03
EPHB4-207ENST00000489808 STXBP5LQ9Y2K9 1186 aa21.49■■□□□ 1.03
EPHB4-207ENST00000489808 KAT6AQ92794 2004 aa21.49■■□□□ 1.03
EPHB4-207ENST00000489808 KDM3AQ9Y4C1 1321 aa21.49■■□□□ 1.03
EPHB4-207ENST00000489808 NEMFO60524 1076 aa21.48■■□□□ 1.03
EPHB4-207ENST00000489808 AMHP03971 560 aa21.48■■□□□ 1.03
EPHB4-207ENST00000489808 U2AF2P26368 475 aaKnown RBP eCLIP21.48■■□□□ 1.03
EPHB4-207ENST00000489808 MCM7P33993 719 aa21.48■■□□□ 1.03
EPHB4-207ENST00000489808 TXKP42681 527 aa21.48■■□□□ 1.03
EPHB4-207ENST00000489808 TSHZ1Q6ZSZ6 1077 aa21.48■■□□□ 1.03
EPHB4-207ENST00000489808 ZBED2Q9BTP6 218 aa21.48■■□□□ 1.03
EPHB4-207ENST00000489808 TMEM60Q9H2L4 133 aa21.48■■□□□ 1.03
EPHB4-207ENST00000489808 AGO3Q9H9G7 860 aaKnown RBP21.48■■□□□ 1.03
EPHB4-207ENST00000489808 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.47■■□□□ 1.03
EPHB4-207ENST00000489808 TLL1O43897 1013 aa21.47■■□□□ 1.03
EPHB4-207ENST00000489808 DKC1O60832 514 aaKnown RBP eCLIP21.47■■□□□ 1.03
EPHB4-207ENST00000489808 GJB5O95377 273 aa21.47■■□□□ 1.03
EPHB4-207ENST00000489808 TMOD1P28289 359 aa21.47■■□□□ 1.03
EPHB4-207ENST00000489808 GJB2P29033 226 aa21.47■■□□□ 1.03
EPHB4-207ENST00000489808 ZNF174Q15697 407 aa21.47■■□□□ 1.03
EPHB4-207ENST00000489808 NCAPH2Q6IBW4 605 aa21.47■■□□□ 1.03
EPHB4-207ENST00000489808 LINC01465Q8N7H1 131 aa21.47■■□□□ 1.03
EPHB4-207ENST00000489808 CEP89Q96ST8 783 aa21.47■■□□□ 1.03
EPHB4-207ENST00000489808 TTC12Q9H892 705 aaPredicted RBP21.47■■□□□ 1.03
EPHB4-207ENST00000489808 CDHR5Q9HBB8 845 aa21.47■■□□□ 1.03
EPHB4-207ENST00000489808 RGL1Q9NZL6 768 aa21.47■■□□□ 1.03
EPHB4-207ENST00000489808 SEPT9Q9UHD8 586 aaPredicted RBP21.47■■□□□ 1.03
EPHB4-207ENST00000489808 TMEM150BA6NC51 233 aa21.46■■□□□ 1.03
EPHB4-207ENST00000489808 ENPP3O14638 875 aa21.46■■□□□ 1.03
EPHB4-207ENST00000489808 CA3P07451 260 aa21.46■■□□□ 1.03
EPHB4-207ENST00000489808 CD52P31358 61 aa21.46■■□□□ 1.03
EPHB4-207ENST00000489808 TRAPPC10P48553 1259 aa21.46■■□□□ 1.03
EPHB4-207ENST00000489808 CLCN3P51790 818 aa21.46■■□□□ 1.03
EPHB4-207ENST00000489808 TBC1D8BQ0IIM8 1120 aa21.46■■□□□ 1.03
EPHB4-207ENST00000489808 ORC2Q13416 577 aaPredicted RBP21.46■■□□□ 1.03
EPHB4-207ENST00000489808 MTERF2Q49AM1 385 aa21.46■■□□□ 1.03
EPHB4-207ENST00000489808 ANO5Q75V66 913 aa21.46■■□□□ 1.03
EPHB4-207ENST00000489808 MYOCDQ8IZQ8 938 aa21.46■■□□□ 1.03
EPHB4-207ENST00000489808 RAD9AQ99638 391 aa21.46■■□□□ 1.03
EPHB4-207ENST00000489808 SUGCTQ9HAC7 445 aa21.46■■□□□ 1.03
EPHB4-207ENST00000489808 WRAP73Q9P2S5 460 aaPredicted RBP21.46■■□□□ 1.03
EPHB4-207ENST00000489808 PADI3Q9ULW8 664 aa21.46■■□□□ 1.03
EPHB4-207ENST00000489808 SMC3Q9UQE7 1217 aa21.46■■□□□ 1.03
EPHB4-207ENST00000489808 GINS2Q9Y248 185 aa21.46■■□□□ 1.03
EPHB4-207ENST00000489808 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.46■■□□□ 1.03
EPHB4-207ENST00000489808 GPR32O75388 356 aa21.45■■□□□ 1.02
EPHB4-207ENST00000489808 SLITRK3O94933 977 aa21.45■■□□□ 1.02
EPHB4-207ENST00000489808 VTNP04004 478 aa21.45■■□□□ 1.02
EPHB4-207ENST00000489808 CRYBB1P53674 252 aaPredicted RBP21.45■■□□□ 1.02
EPHB4-207ENST00000489808 CUL4AQ13619 759 aa21.45■■□□□ 1.02
EPHB4-207ENST00000489808 PPP2R2DQ66LE6 453 aa21.45■■□□□ 1.02
EPHB4-207ENST00000489808 FAM117BQ6P1L5 589 aa21.45■■□□□ 1.02
EPHB4-207ENST00000489808 C4orf19Q8IY42 314 aa21.45■■□□□ 1.02
EPHB4-207ENST00000489808 LRRC71Q8N4P6 559 aa21.45■■□□□ 1.02
EPHB4-207ENST00000489808 MYLIPQ8WY64 445 aa21.45■■□□□ 1.02
EPHB4-207ENST00000489808 TOP1MTQ969P6 601 aa21.45■■□□□ 1.02
EPHB4-207ENST00000489808 DYDC2Q96IM9 177 aa21.45■■□□□ 1.02
EPHB4-207ENST00000489808 HSD17B14Q9BPX1 270 aa21.45■■□□□ 1.02
EPHB4-207ENST00000489808 SH2D3AQ9BRG2 576 aa21.45■■□□□ 1.02
EPHB4-207ENST00000489808 IGKV6-21A0A0C4DH24 114 aa21.44■■□□□ 1.02
EPHB4-207ENST00000489808 KIZQ2M2Z5 673 aa21.44■■□□□ 1.02
EPHB4-207ENST00000489808 TTC38Q5R3I4 469 aa21.44■■□□□ 1.02
EPHB4-207ENST00000489808 RTN4RL1Q86UN2 441 aaPredicted RBP21.44■■□□□ 1.02
EPHB4-207ENST00000489808 ZNF710Q8N1W2 664 aa21.44■■□□□ 1.02
EPHB4-207ENST00000489808 MAP7D2Q96T17 732 aa21.44■■□□□ 1.02
EPHB4-207ENST00000489808 EIF2AK1Q9BQI3 630 aaKnown RBP21.44■■□□□ 1.02
EPHB4-207ENST00000489808 LXNQ9BS40 222 aa21.44■■□□□ 1.02
EPHB4-207ENST00000489808 ZSWIM4Q9H7M6 989 aa21.44■■□□□ 1.02
EPHB4-207ENST00000489808 NOL7Q9UMY1 257 aaKnown RBP21.44■■□□□ 1.02
EPHB4-207ENST00000489808 AKT3Q9Y243 479 aa21.44■■□□□ 1.02
EPHB4-207ENST00000489808 TOB1P50616 345 aaPredicted RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms