RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 TRMT1LQ7Z2T5 733 aaKnown RBP24■■□□□ 1.43
SMC4-221ENST00000489573 GUF1Q8N442 669 aaKnown RBP24■■□□□ 1.43
SMC4-221ENST00000489573 TIPINQ9BVW5 301 aa24■■□□□ 1.43
SMC4-221ENST00000489573 HSD3B7Q9H2F3 369 aa24■■□□□ 1.43
SMC4-221ENST00000489573 FANCLQ9NW38 375 aa24■■□□□ 1.43
SMC4-221ENST00000489573 SEPT9Q9UHD8 586 aaPredicted RBP24■■□□□ 1.43
SMC4-221ENST00000489573 MGAMO43451 1857 aa24■■□□□ 1.43
SMC4-221ENST00000489573 HIP1RO75146 1068 aa23.99■■□□□ 1.43
SMC4-221ENST00000489573 TBC1D8O95759 1140 aa23.99■■□□□ 1.43
SMC4-221ENST00000489573 OATP04181 439 aa23.99■■□□□ 1.43
SMC4-221ENST00000489573 STAT5BP51692 787 aa23.99■■□□□ 1.43
SMC4-221ENST00000489573 ZNF131P52739 623 aa23.99■■□□□ 1.43
SMC4-221ENST00000489573 NPEPPSP55786 919 aa23.99■■□□□ 1.43
SMC4-221ENST00000489573 CCDC173Q0VFZ6 552 aa23.99■■□□□ 1.43
SMC4-221ENST00000489573 CEP170P1Q96L14 293 aa23.99■■□□□ 1.43
SMC4-221ENST00000489573 TRIM47Q96LD4 638 aa23.99■■□□□ 1.43
SMC4-221ENST00000489573 ARHGAP39Q9C0H5 1083 aa23.99■■□□□ 1.43
SMC4-221ENST00000489573 AZI2Q9H6S1 392 aa23.99■■□□□ 1.43
SMC4-221ENST00000489573 PARVGQ9HBI0 331 aa23.99■■□□□ 1.43
SMC4-221ENST00000489573 TBC1D7Q9P0N9 293 aa23.99■■□□□ 1.43
SMC4-221ENST00000489573 DOCK3Q8IZD9 2030 aa23.99■■□□□ 1.43
SMC4-221ENST00000489573 LGR5O75473 907 aa23.99■■□□□ 1.43
SMC4-221ENST00000489573 ADCY5O95622 1261 aa23.99■■□□□ 1.43
SMC4-221ENST00000489573 ATP4AP20648 1035 aa23.99■■□□□ 1.43
SMC4-221ENST00000489573 CCNE1P24864 410 aa23.99■■□□□ 1.43
SMC4-221ENST00000489573 CCL14Q16627 93 aa23.99■■□□□ 1.43
SMC4-221ENST00000489573 IQSEC1Q6DN90 963 aa23.99■■□□□ 1.43
SMC4-221ENST00000489573 P2RX5Q93086 422 aa23.99■■□□□ 1.43
SMC4-221ENST00000489573 EMID1Q96A84 441 aaPredicted RBP23.99■■□□□ 1.43
SMC4-221ENST00000489573 SH2D3AQ9BRG2 576 aa23.99■■□□□ 1.43
SMC4-221ENST00000489573 SEL1LQ9UBV2 794 aa23.99■■□□□ 1.43
SMC4-221ENST00000489573 EMSYQ7Z589 1322 aa23.98■■□□□ 1.43
SMC4-221ENST00000489573 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.98■■□□□ 1.43
SMC4-221ENST00000489573 BICDL2A1A5D9 508 aa23.98■■□□□ 1.43
SMC4-221ENST00000489573 NKRFO15226 690 aaKnown RBP eCLIP23.98■■□□□ 1.43
SMC4-221ENST00000489573 MAPK7Q13164 816 aa23.98■■□□□ 1.43
SMC4-221ENST00000489573 TPD52L1Q16890 204 aaPredicted RBP23.98■■□□□ 1.43
SMC4-221ENST00000489573 DUSP28Q4G0W2 176 aa23.98■■□□□ 1.43
SMC4-221ENST00000489573 GJC2Q5T442 439 aaPredicted RBP23.98■■□□□ 1.43
SMC4-221ENST00000489573 MYOCDQ8IZQ8 938 aa23.98■■□□□ 1.43
SMC4-221ENST00000489573 MYCT1Q8N699 235 aa23.98■■□□□ 1.43
SMC4-221ENST00000489573 GLIS3Q8NEA6 775 aa23.98■■□□□ 1.43
SMC4-221ENST00000489573 OLFML3Q9NRN5 406 aa23.98■■□□□ 1.43
SMC4-221ENST00000489573 RNF186Q9NXI6 227 aa23.98■■□□□ 1.43
SMC4-221ENST00000489573 KIF20AO95235 890 aa23.97■■□□□ 1.43
SMC4-221ENST00000489573 SMPD1P17405 629 aa23.97■■□□□ 1.43
SMC4-221ENST00000489573 SP3Q02447 781 aa23.97■■□□□ 1.43
SMC4-221ENST00000489573 KIF22Q14807 665 aa23.97■■□□□ 1.43
SMC4-221ENST00000489573 LRRC41Q15345 812 aa23.97■■□□□ 1.43
SMC4-221ENST00000489573 CCDC144BQ3MJ40 725 aa23.97■■□□□ 1.43
SMC4-221ENST00000489573 FAM167AQ96KS9 214 aa23.97■■□□□ 1.43
SMC4-221ENST00000489573 FGFBP2Q9BYJ0 223 aa23.97■■□□□ 1.43
SMC4-221ENST00000489573 TRIM5Q9C035 493 aa23.97■■□□□ 1.43
SMC4-221ENST00000489573 POLD4Q9HCU8 107 aa23.97■■□□□ 1.43
SMC4-221ENST00000489573 CYP26B1Q9NR63 512 aa23.97■■□□□ 1.43
SMC4-221ENST00000489573 TRIM49BA6NDI0 452 aa23.96■■□□□ 1.43
SMC4-221ENST00000489573 IGHA2P01877 340 aa23.96■■□□□ 1.43
SMC4-221ENST00000489573 XRCC5P13010 732 aaKnown RBP23.96■■□□□ 1.43
SMC4-221ENST00000489573 ZNF18P17022 549 aa23.96■■□□□ 1.43
SMC4-221ENST00000489573 PTGS1P23219 599 aa23.96■■□□□ 1.43
SMC4-221ENST00000489573 PMS1P54277 932 aaKnown RBP23.96■■□□□ 1.43
SMC4-221ENST00000489573 PLPPR4Q7Z2D5 763 aa23.96■■□□□ 1.43
SMC4-221ENST00000489573 DAW1Q8N136 415 aa23.96■■□□□ 1.43
SMC4-221ENST00000489573 PPTC7Q8NI37 304 aa23.96■■□□□ 1.43
SMC4-221ENST00000489573 GLG1Q92896 1179 aa23.96■■□□□ 1.43
SMC4-221ENST00000489573 PDLIM2Q96JY6 352 aa23.96■■□□□ 1.43
SMC4-221ENST00000489573 PPP1R9BQ96SB3 815 aa23.96■■□□□ 1.43
SMC4-221ENST00000489573 NRBP2Q9NSY0 501 aa23.96■■□□□ 1.43
SMC4-221ENST00000489573 THSD7BQ9C0I4 1608 aa23.96■■□□□ 1.43
SMC4-221ENST00000489573 ZSWIM8A7E2V4 1837 aa23.96■■□□□ 1.43
SMC4-221ENST00000489573 SFI1A8K8P3 1242 aa23.95■■□□□ 1.43
SMC4-221ENST00000489573 TRPA1O75762 1119 aa23.95■■□□□ 1.43
SMC4-221ENST00000489573 DGAT1O75907 488 aa23.95■■□□□ 1.43
SMC4-221ENST00000489573 ZNF865P0CJ78 1059 aaPredicted RBP23.95■■□□□ 1.43
SMC4-221ENST00000489573 ATP1A3P13637 1013 aa23.95■■□□□ 1.43
SMC4-221ENST00000489573 CYP2C19P33261 490 aa23.95■■□□□ 1.43
SMC4-221ENST00000489573 MTERF2Q49AM1 385 aa23.95■■□□□ 1.43
SMC4-221ENST00000489573 PRAMEF19Q5SWL8 479 aa23.95■■□□□ 1.43
SMC4-221ENST00000489573 CENPPQ6IPU0 288 aa23.95■■□□□ 1.43
SMC4-221ENST00000489573 TTI2Q6NXR4 508 aa23.95■■□□□ 1.43
SMC4-221ENST00000489573 MAEAQ7L5Y9 396 aa23.95■■□□□ 1.43
SMC4-221ENST00000489573 DRC1Q96MC2 740 aa23.95■■□□□ 1.43
SMC4-221ENST00000489573 NIFKQ9BYG3 293 aaKnown RBP23.95■■□□□ 1.43
SMC4-221ENST00000489573 MRPL44Q9H9J2 332 aaKnown RBP23.95■■□□□ 1.43
SMC4-221ENST00000489573 SAMSN1Q9NSI8 373 aaKnown RBP23.95■■□□□ 1.43
SMC4-221ENST00000489573 ARID2Q68CP9 1835 aa23.95■■□□□ 1.42
SMC4-221ENST00000489573 MYH9P35579 1960 aaKnown RBP23.95■■□□□ 1.42
SMC4-221ENST00000489573 ZNF75DP51815 510 aa23.95■■□□□ 1.42
SMC4-221ENST00000489573 SMARCAD1Q9H4L7 1026 aa23.95■■□□□ 1.42
SMC4-221ENST00000489573 SLC26A2P50443 739 aa23.94■■□□□ 1.42
SMC4-221ENST00000489573 CASP5P51878 434 aa23.94■■□□□ 1.42
SMC4-221ENST00000489573 TNFAIP2Q03169 654 aa23.94■■□□□ 1.42
SMC4-221ENST00000489573 ODR4Q5SWX8 454 aa23.94■■□□□ 1.42
SMC4-221ENST00000489573 CDKAL1Q5VV42 579 aa23.94■■□□□ 1.42
SMC4-221ENST00000489573 EPM2AIP1Q7L775 607 aaPredicted RBP23.94■■□□□ 1.42
SMC4-221ENST00000489573 TRIM50Q86XT4 487 aa23.94■■□□□ 1.42
SMC4-221ENST00000489573 MCPH1Q8NEM0 835 aa23.94■■□□□ 1.42
SMC4-221ENST00000489573 OR6J1Q8NGC5 347 aa23.94■■□□□ 1.42
SMC4-221ENST00000489573 AFG1LQ8WV93 481 aa23.94■■□□□ 1.42
SMC4-221ENST00000489573 SCFD1Q8WVM8 642 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms