RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 WDR64B1ANS9 1081 aa11.88□□□□□ -0.51
SCAMP4-208ENST00000489554 M0QZ92 97 aa11.88□□□□□ -0.51
SCAMP4-208ENST00000489554 MSH4O15457 936 aa11.88□□□□□ -0.51
SCAMP4-208ENST00000489554 BAG4O95429 457 aaKnown RBP11.88□□□□□ -0.51
SCAMP4-208ENST00000489554 CYP3A7P24462 503 aa11.88□□□□□ -0.51
SCAMP4-208ENST00000489554 TRAPPC10P48553 1259 aa11.88□□□□□ -0.51
SCAMP4-208ENST00000489554 NASPP49321 788 aaPredicted RBP11.88□□□□□ -0.51
SCAMP4-208ENST00000489554 MRPS6P82932 125 aaKnown RBP11.88□□□□□ -0.51
SCAMP4-208ENST00000489554 TAP1Q03518 808 aa11.88□□□□□ -0.51
SCAMP4-208ENST00000489554 MGAT3Q09327 533 aa11.88□□□□□ -0.51
SCAMP4-208ENST00000489554 ADGRE1Q14246 886 aa11.88□□□□□ -0.51
SCAMP4-208ENST00000489554 PTPAQ15257 358 aa11.88□□□□□ -0.51
SCAMP4-208ENST00000489554 Q4G0T1 1027 aa11.88□□□□□ -0.51
SCAMP4-208ENST00000489554 ZNF484Q5JVG2 852 aa11.88□□□□□ -0.51
SCAMP4-208ENST00000489554 SWSAP1Q6NVH7 229 aa11.88□□□□□ -0.51
SCAMP4-208ENST00000489554 MOXD1Q6UVY6 613 aa11.88□□□□□ -0.51
SCAMP4-208ENST00000489554 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.88□□□□□ -0.51
SCAMP4-208ENST00000489554 MYOCDQ8IZQ8 938 aa11.88□□□□□ -0.51
SCAMP4-208ENST00000489554 NME8Q8N427 588 aa11.88□□□□□ -0.51
SCAMP4-208ENST00000489554 C4orf32Q8N8J7 132 aa11.88□□□□□ -0.51
SCAMP4-208ENST00000489554 USP38Q8NB14 1042 aa11.88□□□□□ -0.51
SCAMP4-208ENST00000489554 BBXQ8WY36 941 aaPredicted RBP11.88□□□□□ -0.51
SCAMP4-208ENST00000489554 MBOAT7Q96N66 472 aa11.88□□□□□ -0.51
SCAMP4-208ENST00000489554 GBP4Q96PP9 640 aa11.88□□□□□ -0.51
SCAMP4-208ENST00000489554 FAM49AQ9H0Q0 323 aaPredicted RBP11.88□□□□□ -0.51
SCAMP4-208ENST00000489554 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.88□□□□□ -0.51
SCAMP4-208ENST00000489554 TFIP11Q9UBB9 837 aaKnown RBP11.88□□□□□ -0.51
SCAMP4-208ENST00000489554 INSL6Q9Y581 213 aa11.88□□□□□ -0.51
SCAMP4-208ENST00000489554 MAFBQ9Y5Q3 323 aaPredicted RBP11.88□□□□□ -0.51
SCAMP4-208ENST00000489554 CLIC4Q9Y696 253 aa11.88□□□□□ -0.51
SCAMP4-208ENST00000489554 CDY2AQ9Y6F7 541 aa11.88□□□□□ -0.51
SCAMP4-208ENST00000489554 SQORQ9Y6N5 450 aa11.88□□□□□ -0.51
SCAMP4-208ENST00000489554 GBF1Q92538 1859 aa11.87□□□□□ -0.51
SCAMP4-208ENST00000489554 CCDC194A0A1B0GVG4 234 aa11.87□□□□□ -0.51
SCAMP4-208ENST00000489554 GAS7O60861 476 aa11.87□□□□□ -0.51
SCAMP4-208ENST00000489554 GHRP10912 638 aa11.87□□□□□ -0.51
SCAMP4-208ENST00000489554 IGFBP4P22692 258 aa11.87□□□□□ -0.51
SCAMP4-208ENST00000489554 SFNP31947 248 aa11.87□□□□□ -0.51
SCAMP4-208ENST00000489554 JAK3P52333 1124 aa11.87□□□□□ -0.51
SCAMP4-208ENST00000489554 GNL2Q13823 731 aaKnown RBP11.87□□□□□ -0.51
SCAMP4-208ENST00000489554 LPIN1Q14693 890 aa11.87□□□□□ -0.51
SCAMP4-208ENST00000489554 RILPL1Q5EBL4 403 aa11.87□□□□□ -0.51
SCAMP4-208ENST00000489554 FBXO47Q5MNV8 452 aa11.87□□□□□ -0.51
SCAMP4-208ENST00000489554 LRCH2Q5VUJ6 765 aa11.87□□□□□ -0.51
SCAMP4-208ENST00000489554 MTHFD1LQ6UB35 978 aa11.87□□□□□ -0.51
SCAMP4-208ENST00000489554 TMCO2Q7Z6W1 182 aaPredicted RBP11.87□□□□□ -0.51
SCAMP4-208ENST00000489554 NEK8Q86SG6 692 aa11.87□□□□□ -0.51
SCAMP4-208ENST00000489554 CKAP2LQ8IYA6 745 aa11.87□□□□□ -0.51
SCAMP4-208ENST00000489554 TRAPPC12Q8WVT3 735 aa11.87□□□□□ -0.51
SCAMP4-208ENST00000489554 SLC5A5Q92911 643 aa11.87□□□□□ -0.51
SCAMP4-208ENST00000489554 FAM167AQ96KS9 214 aa11.87□□□□□ -0.51
SCAMP4-208ENST00000489554 UIMC1Q96RL1 719 aa11.87□□□□□ -0.51
SCAMP4-208ENST00000489554 TEKT3Q9BXF9 490 aa11.87□□□□□ -0.51
SCAMP4-208ENST00000489554 OSBPL7Q9BZF2 842 aa11.87□□□□□ -0.51
SCAMP4-208ENST00000489554 CEP131Q9UPN4 1083 aa11.87□□□□□ -0.51
SCAMP4-208ENST00000489554 SAMM50Q9Y512 469 aa11.87□□□□□ -0.51
SCAMP4-208ENST00000489554 TRPV2Q9Y5S1 764 aa11.87□□□□□ -0.51
SCAMP4-208ENST00000489554 LCHNA4D1U4 455 aa11.86□□□□□ -0.51
SCAMP4-208ENST00000489554 DDX11L8A8MPP1 907 aa11.86□□□□□ -0.51
SCAMP4-208ENST00000489554 GOLGA6L22H0YM25 854 aa11.86□□□□□ -0.51
SCAMP4-208ENST00000489554 GTPBP6O43824 516 aaPredicted RBP11.86□□□□□ -0.51
SCAMP4-208ENST00000489554 ARHGEF15O94989 841 aa11.86□□□□□ -0.51
SCAMP4-208ENST00000489554 TDP2O95551 362 aa11.86□□□□□ -0.51
SCAMP4-208ENST00000489554 POU3F3P20264 500 aaPredicted RBP11.86□□□□□ -0.51
SCAMP4-208ENST00000489554 KLRC1P26715 233 aa11.86□□□□□ -0.51
SCAMP4-208ENST00000489554 HTRA4P83105 476 aaPredicted RBP11.86□□□□□ -0.51
SCAMP4-208ENST00000489554 SF3A1Q15459 793 aaKnown RBP11.86□□□□□ -0.51
SCAMP4-208ENST00000489554 TTC38Q5R3I4 469 aa11.86□□□□□ -0.51
SCAMP4-208ENST00000489554 FAM117BQ6P1L5 589 aa11.86□□□□□ -0.51
SCAMP4-208ENST00000489554 TSHZ1Q6ZSZ6 1077 aa11.86□□□□□ -0.51
SCAMP4-208ENST00000489554 FAM43BQ6ZT52 329 aaPredicted RBP11.86□□□□□ -0.51
SCAMP4-208ENST00000489554 LINC00301Q8NCQ3 95 aa11.86□□□□□ -0.51
SCAMP4-208ENST00000489554 RDM1Q8NG50 284 aa11.86□□□□□ -0.51
SCAMP4-208ENST00000489554 ARNTL2Q8WYA1 636 aa11.86□□□□□ -0.51
SCAMP4-208ENST00000489554 TOP1MTQ969P6 601 aa11.86□□□□□ -0.51
SCAMP4-208ENST00000489554 ZBTB10Q96DT7 871 aa11.86□□□□□ -0.51
SCAMP4-208ENST00000489554 CERS4Q9HA82 394 aa11.86□□□□□ -0.51
SCAMP4-208ENST00000489554 DISC1Q9NRI5 854 aa11.86□□□□□ -0.51
SCAMP4-208ENST00000489554 GABBR1Q9UBS5 961 aa11.86□□□□□ -0.51
SCAMP4-208ENST00000489554 MORC2Q9Y6X9 1032 aaPredicted RBP11.86□□□□□ -0.51
SCAMP4-208ENST00000489554 KAT6AQ92794 2004 aa11.86□□□□□ -0.51
SCAMP4-208ENST00000489554 IGSF9BQ9UPX0 1349 aa11.86□□□□□ -0.51
SCAMP4-208ENST00000489554 KDM3AQ9Y4C1 1321 aa11.86□□□□□ -0.51
SCAMP4-208ENST00000489554 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.85□□□□□ -0.51
SCAMP4-208ENST00000489554 ZBTB42B2RXF5 422 aa11.85□□□□□ -0.51
SCAMP4-208ENST00000489554 SLC37A4O43826 429 aa11.85□□□□□ -0.51
SCAMP4-208ENST00000489554 PSMD10O75832 226 aa11.85□□□□□ -0.51
SCAMP4-208ENST00000489554 GCFC2P16383 781 aaKnown RBP11.85□□□□□ -0.51
SCAMP4-208ENST00000489554 ATP4AP20648 1035 aa11.85□□□□□ -0.51
SCAMP4-208ENST00000489554 LETM2Q2VYF4 491 aa11.85□□□□□ -0.51
SCAMP4-208ENST00000489554 ATL3Q6DD88 541 aa11.85□□□□□ -0.51
SCAMP4-208ENST00000489554 PPP4R3AQ6IN85 833 aa11.85□□□□□ -0.51
SCAMP4-208ENST00000489554 TMEM87AQ8NBN3 555 aa11.85□□□□□ -0.51
SCAMP4-208ENST00000489554 SP7Q8TDD2 431 aaPredicted RBP11.85□□□□□ -0.51
SCAMP4-208ENST00000489554 LEO1Q8WVC0 666 aaPredicted RBP11.85□□□□□ -0.51
SCAMP4-208ENST00000489554 TGS1Q96RS0 853 aaKnown RBP11.85□□□□□ -0.51
SCAMP4-208ENST00000489554 YME1L1Q96TA2 773 aa11.85□□□□□ -0.51
SCAMP4-208ENST00000489554 NAP1L4Q99733 375 aaKnown RBP11.85□□□□□ -0.51
SCAMP4-208ENST00000489554 FTHL17Q9BXU8 183 aa11.85□□□□□ -0.51
SCAMP4-208ENST00000489554 CELF4Q9BZC1 486 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms