RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 KCNJ6P48051 423 aa19.46■□□□□ 0.71
MDC1-206ENST00000489540 TARBP2Q15633 366 aaKnown RBP19.46■□□□□ 0.71
MDC1-206ENST00000489540 RILPL1Q5EBL4 403 aa19.46■□□□□ 0.71
MDC1-206ENST00000489540 C4orf19Q8IY42 314 aa19.46■□□□□ 0.71
MDC1-206ENST00000489540 ZNF710Q8N1W2 664 aa19.46■□□□□ 0.71
MDC1-206ENST00000489540 METTL13Q8N6R0 699 aa19.46■□□□□ 0.71
MDC1-206ENST00000489540 APBB2Q92870 758 aa19.46■□□□□ 0.71
MDC1-206ENST00000489540 SLC9A7Q96T83 725 aa19.46■□□□□ 0.71
MDC1-206ENST00000489540 CELF4Q9BZC1 486 aaKnown RBP19.46■□□□□ 0.71
MDC1-206ENST00000489540 ZSWIM4Q9H7M6 989 aa19.46■□□□□ 0.71
MDC1-206ENST00000489540 SEPT9Q9UHD8 586 aaPredicted RBP19.46■□□□□ 0.71
MDC1-206ENST00000489540 TRPV2Q9Y5S1 764 aa19.46■□□□□ 0.71
MDC1-206ENST00000489540 TOB1P50616 345 aaPredicted RBP19.45■□□□□ 0.7
MDC1-206ENST00000489540 TBC1D8BQ0IIM8 1120 aa19.45■□□□□ 0.7
MDC1-206ENST00000489540 EFCAB12Q6NXP0 572 aa19.45■□□□□ 0.7
MDC1-206ENST00000489540 OTUD6AQ7L8S5 288 aa19.45■□□□□ 0.7
MDC1-206ENST00000489540 USP38Q8NB14 1042 aa19.45■□□□□ 0.7
MDC1-206ENST00000489540 NEK9Q8TD19 979 aa19.45■□□□□ 0.7
MDC1-206ENST00000489540 DYDC2Q96IM9 177 aa19.45■□□□□ 0.7
MDC1-206ENST00000489540 HSD17B14Q9BPX1 270 aa19.45■□□□□ 0.7
MDC1-206ENST00000489540 EIF2AK1Q9BQI3 630 aaKnown RBP19.45■□□□□ 0.7
MDC1-206ENST00000489540 RGL1Q9NZL6 768 aa19.45■□□□□ 0.7
MDC1-206ENST00000489540 KDM3AQ9Y4C1 1321 aa19.45■□□□□ 0.7
MDC1-206ENST00000489540 GRXCR1A8MXD5 290 aa19.44■□□□□ 0.7
MDC1-206ENST00000489540 SLITRK3O94933 977 aa19.44■□□□□ 0.7
MDC1-206ENST00000489540 RAB30Q15771 203 aa19.44■□□□□ 0.7
MDC1-206ENST00000489540 FBXO47Q5MNV8 452 aa19.44■□□□□ 0.7
MDC1-206ENST00000489540 ANO5Q75V66 913 aa19.44■□□□□ 0.7
MDC1-206ENST00000489540 EXOC8Q8IYI6 725 aa19.44■□□□□ 0.7
MDC1-206ENST00000489540 C4orf32Q8N8J7 132 aa19.44■□□□□ 0.7
MDC1-206ENST00000489540 LXNQ9BS40 222 aa19.44■□□□□ 0.7
MDC1-206ENST00000489540 IFIH1Q9BYX4 1025 aaKnown RBP19.44■□□□□ 0.7
MDC1-206ENST00000489540 MSRAQ9UJ68 235 aa19.44■□□□□ 0.7
MDC1-206ENST00000489540 PPME1Q9Y570 386 aa19.44■□□□□ 0.7
MDC1-206ENST00000489540 TRIP12Q14669 1992 aaPredicted RBP19.44■□□□□ 0.7
MDC1-206ENST00000489540 LAMA3Q16787 3333 aa19.44■□□□□ 0.7
MDC1-206ENST00000489540 TMEM265A0A087WTH1 108 aa19.43■□□□□ 0.7
MDC1-206ENST00000489540 LAD1O00515 517 aa19.43■□□□□ 0.7
MDC1-206ENST00000489540 GHRP10912 638 aa19.43■□□□□ 0.7
MDC1-206ENST00000489540 TECP42680 631 aa19.43■□□□□ 0.7
MDC1-206ENST00000489540 WDR5P61964 334 aaKnown RBP19.43■□□□□ 0.7
MDC1-206ENST00000489540 TMEM62Q0P6H9 643 aa19.43■□□□□ 0.7
MDC1-206ENST00000489540 LPIN1Q14693 890 aa19.43■□□□□ 0.7
MDC1-206ENST00000489540 TMEM266Q2M3C6 531 aa19.43■□□□□ 0.7
MDC1-206ENST00000489540 TCTN1Q2MV58 587 aa19.43■□□□□ 0.7
MDC1-206ENST00000489540 MTERF2Q49AM1 385 aa19.43■□□□□ 0.7
MDC1-206ENST00000489540 TSHZ1Q6ZSZ6 1077 aa19.43■□□□□ 0.7
MDC1-206ENST00000489540 FAM43BQ6ZT52 329 aaPredicted RBP19.43■□□□□ 0.7
MDC1-206ENST00000489540 HSCBQ8IWL3 235 aa19.43■□□□□ 0.7
MDC1-206ENST00000489540 TPH2Q8IWU9 490 aa19.43■□□□□ 0.7
MDC1-206ENST00000489540 MAP7D2Q96T17 732 aa19.43■□□□□ 0.7
MDC1-206ENST00000489540 JPH2Q9BR39 696 aaPredicted RBP19.43■□□□□ 0.7
MDC1-206ENST00000489540 PBX4Q9BYU1 374 aa19.43■□□□□ 0.7
MDC1-206ENST00000489540 OSBPL7Q9BZF2 842 aa19.43■□□□□ 0.7
MDC1-206ENST00000489540 SUGCTQ9HAC7 445 aa19.43■□□□□ 0.7
MDC1-206ENST00000489540 PCDHB6Q9Y5E3 794 aa19.43■□□□□ 0.7
MDC1-206ENST00000489540 LYPLA2O95372 231 aa19.42■□□□□ 0.7
MDC1-206ENST00000489540 DNAJB2P25686 324 aa19.42■□□□□ 0.7
MDC1-206ENST00000489540 YWHABP31946 246 aaKnown RBP19.42■□□□□ 0.7
MDC1-206ENST00000489540 CYP4A11Q02928 519 aa19.42■□□□□ 0.7
MDC1-206ENST00000489540 PTGDRQ13258 359 aa19.42■□□□□ 0.7
MDC1-206ENST00000489540 CTTNQ14247 550 aaKnown RBP19.42■□□□□ 0.7
MDC1-206ENST00000489540 NBR1Q14596 966 aa19.42■□□□□ 0.7
MDC1-206ENST00000489540 ZNF697Q5TEC3 545 aa19.42■□□□□ 0.7
MDC1-206ENST00000489540 DEFB123Q8N688 67 aa19.42■□□□□ 0.7
MDC1-206ENST00000489540 LINC01465Q8N7H1 131 aa19.42■□□□□ 0.7
MDC1-206ENST00000489540 TIFAQ96CG3 184 aa19.42■□□□□ 0.7
MDC1-206ENST00000489540 CEP89Q96ST8 783 aa19.42■□□□□ 0.7
MDC1-206ENST00000489540 CYP26B1Q9NR63 512 aa19.42■□□□□ 0.7
MDC1-206ENST00000489540 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.42■□□□□ 0.7
MDC1-206ENST00000489540 WRAP73Q9P2S5 460 aaPredicted RBP19.42■□□□□ 0.7
MDC1-206ENST00000489540 KAT6AQ92794 2004 aa19.42■□□□□ 0.7
MDC1-206ENST00000489540 DNM2P50570 870 aa19.42■□□□□ 0.7
MDC1-206ENST00000489540 CLCN3P51790 818 aa19.42■□□□□ 0.7
MDC1-206ENST00000489540 CRYBB1P53674 252 aaPredicted RBP19.42■□□□□ 0.7
MDC1-206ENST00000489540 CDC42EP1Q00587 391 aa19.42■□□□□ 0.7
MDC1-206ENST00000489540 BRAPQ7Z569 592 aa19.42■□□□□ 0.7
MDC1-206ENST00000489540 HERC6Q8IVU3 1022 aa19.42■□□□□ 0.7
MDC1-206ENST00000489540 ERMNQ8TAM6 284 aa19.42■□□□□ 0.7
MDC1-206ENST00000489540 CEP170P1Q96L14 293 aa19.42■□□□□ 0.7
MDC1-206ENST00000489540 AKT3Q9Y243 479 aa19.42■□□□□ 0.7
MDC1-206ENST00000489540 PCDHA11Q9Y5I1 949 aa19.42■□□□□ 0.7
MDC1-206ENST00000489540 IGKV6-21A0A0C4DH24 114 aa19.41■□□□□ 0.7
MDC1-206ENST00000489540 TMEM150BA6NC51 233 aa19.41■□□□□ 0.7
MDC1-206ENST00000489540 POTEMA6NI47 508 aa19.41■□□□□ 0.7
MDC1-206ENST00000489540 MAFO75444 373 aaPredicted RBP19.41■□□□□ 0.7
MDC1-206ENST00000489540 AMHP03971 560 aa19.41■□□□□ 0.7
MDC1-206ENST00000489540 XRCC6P12956 609 aaKnown RBP eCLIP19.41■□□□□ 0.7
MDC1-206ENST00000489540 PBX2P40425 430 aa19.41■□□□□ 0.7
MDC1-206ENST00000489540 FXR2P51116 673 aaKnown RBP eCLIP19.41■□□□□ 0.76e-7■■■■□ 22.9
MDC1-206ENST00000489540 PDIA5Q14554 519 aa19.41■□□□□ 0.7
MDC1-206ENST00000489540 ODR4Q5SWX8 454 aa19.41■□□□□ 0.7
MDC1-206ENST00000489540 LRRC71Q8N4P6 559 aa19.41■□□□□ 0.7
MDC1-206ENST00000489540 RAB34Q9BZG1 259 aa19.41■□□□□ 0.7
MDC1-206ENST00000489540 TUFT1Q9NNX1 390 aa19.41■□□□□ 0.7
MDC1-206ENST00000489540 GINS2Q9Y248 185 aa19.41■□□□□ 0.7
MDC1-206ENST00000489540 STK24Q9Y6E0 443 aa19.41■□□□□ 0.7
MDC1-206ENST00000489540 TANC1Q9C0D5 1861 aa19.4■□□□□ 0.7
MDC1-206ENST00000489540 GPR32O75388 356 aa19.4■□□□□ 0.7
MDC1-206ENST00000489540 VTNP04004 478 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms