RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 LONP2Q86WA8 852 aa9.03□□□□□ -0.96
EXOSC3-206ENST00000489414 DHX37Q8IY37 1157 aaKnown RBP9.03□□□□□ -0.96
EXOSC3-206ENST00000489414 SPATA5Q8NB90 893 aa9.03□□□□□ -0.96
EXOSC3-206ENST00000489414 COLGALT1Q8NBJ5 622 aa9.03□□□□□ -0.96
EXOSC3-206ENST00000489414 SCFD2Q8WU76 684 aa9.03□□□□□ -0.96
EXOSC3-206ENST00000489414 LINC01599Q8WXQ3 324 aa9.03□□□□□ -0.96
EXOSC3-206ENST00000489414 RNF166Q96A37 237 aaPredicted RBP9.03□□□□□ -0.96
EXOSC3-206ENST00000489414 NELL2Q99435 816 aa9.03□□□□□ -0.96
EXOSC3-206ENST00000489414 NUP88Q99567 741 aaPredicted RBP9.03□□□□□ -0.96
EXOSC3-206ENST00000489414 IER2Q9BTL4 223 aa9.03□□□□□ -0.96
EXOSC3-206ENST00000489414 CHRDQ9H2X0 955 aa9.03□□□□□ -0.96
EXOSC3-206ENST00000489414 SFXN1Q9H9B4 322 aa9.03□□□□□ -0.96
EXOSC3-206ENST00000489414 RNF146Q9NTX7 359 aa9.03□□□□□ -0.96
EXOSC3-206ENST00000489414 CYP39A1Q9NYL5 469 aa9.03□□□□□ -0.96
EXOSC3-206ENST00000489414 LRBAP50851 2863 aa9.03□□□□□ -0.96
EXOSC3-206ENST00000489414 SPENQ96T58 3664 aaKnown RBP9.03□□□□□ -0.96
EXOSC3-206ENST00000489414 LAMA4Q16363 1823 aa9.03□□□□□ -0.96
EXOSC3-206ENST00000489414 LOC102724159A0A0B4J2E5 919 aa9.02□□□□□ -0.97
EXOSC3-206ENST00000489414 A0A1B0GTL3 188 aa9.02□□□□□ -0.97
EXOSC3-206ENST00000489414 SPAARA0A1B0GVQ0 90 aa9.02□□□□□ -0.97
EXOSC3-206ENST00000489414 ARIH2O95376 493 aa9.02□□□□□ -0.97
EXOSC3-206ENST00000489414 EEF2P13639 858 aaKnown RBP9.02□□□□□ -0.97
EXOSC3-206ENST00000489414 DYNLL1P63167 89 aaKnown RBP9.02□□□□□ -0.97
EXOSC3-206ENST00000489414 SMC1AQ14683 1233 aaKnown RBP9.02□□□□□ -0.97
EXOSC3-206ENST00000489414 PWP2Q15269 919 aaKnown RBP9.02□□□□□ -0.97
EXOSC3-206ENST00000489414 FAM26DQ5JW98 314 aa9.02□□□□□ -0.97
EXOSC3-206ENST00000489414 CCNI2Q6ZMN8 369 aaPredicted RBP9.02□□□□□ -0.97
EXOSC3-206ENST00000489414 PIP4K2CQ8TBX8 421 aa9.02□□□□□ -0.97
EXOSC3-206ENST00000489414 NANOS1Q8WY41 292 aaKnown RBP9.02□□□□□ -0.97
EXOSC3-206ENST00000489414 GPCPD1Q9NPB8 672 aa9.02□□□□□ -0.97
EXOSC3-206ENST00000489414 CEP126Q9P2H0 1117 aa9.02□□□□□ -0.97
EXOSC3-206ENST00000489414 LRP2BPQ9P2M1 347 aa9.02□□□□□ -0.97
EXOSC3-206ENST00000489414 IL17BQ9UHF5 180 aa9.02□□□□□ -0.97
EXOSC3-206ENST00000489414 PUF60Q9UHX1 559 aaKnown RBP9.02□□□□□ -0.97
EXOSC3-206ENST00000489414 CTDP1Q9Y5B0 961 aaPredicted RBP9.02□□□□□ -0.97
EXOSC3-206ENST00000489414 NUMBLQ9Y6R0 609 aa9.02□□□□□ -0.97
EXOSC3-206ENST00000489414 F5P12259 2224 aa9.02□□□□□ -0.97
EXOSC3-206ENST00000489414 LNP1A1A4G5 178 aa9.01□□□□□ -0.97
EXOSC3-206ENST00000489414 SLC28A2O43868 658 aa9.01□□□□□ -0.97
EXOSC3-206ENST00000489414 ALDH1L1O75891 902 aa9.01□□□□□ -0.97
EXOSC3-206ENST00000489414 TXNP10599 105 aaKnown RBP9.01□□□□□ -0.97
EXOSC3-206ENST00000489414 HOXC8P31273 242 aa9.01□□□□□ -0.97
EXOSC3-206ENST00000489414 USP5P45974 858 aa9.01□□□□□ -0.97
EXOSC3-206ENST00000489414 ALDH5A1P51649 535 aaPredicted RBP9.01□□□□□ -0.97
EXOSC3-206ENST00000489414 SIM1P81133 766 aaPredicted RBP9.01□□□□□ -0.97
EXOSC3-206ENST00000489414 DGKDQ16760 1214 aa9.01□□□□□ -0.97
EXOSC3-206ENST00000489414 SPOUT1Q5T280 376 aaKnown RBP9.01□□□□□ -0.97
EXOSC3-206ENST00000489414 C15orf39Q6ZRI6 1047 aa9.01□□□□□ -0.97
EXOSC3-206ENST00000489414 TMC7Q7Z402 723 aa9.01□□□□□ -0.97
EXOSC3-206ENST00000489414 CABP7Q86V35 215 aa9.01□□□□□ -0.97
EXOSC3-206ENST00000489414 USP26Q9BXU7 913 aa9.01□□□□□ -0.97
EXOSC3-206ENST00000489414 CCDC8Q9H0W5 538 aaPredicted RBP9.01□□□□□ -0.97
EXOSC3-206ENST00000489414 EHMT1Q9H9B1 1298 aa9.01□□□□□ -0.97
EXOSC3-206ENST00000489414 HCSTQ9UBK5 93 aa9.01□□□□□ -0.97
EXOSC3-206ENST00000489414 ATG2BQ96BY7 2078 aa9.01□□□□□ -0.97
EXOSC3-206ENST00000489414 NRCAMQ92823 1304 aa9.01□□□□□ -0.97
EXOSC3-206ENST00000489414 MYO5AQ9Y4I1 1855 aaKnown RBP9□□□□□ -0.97
EXOSC3-206ENST00000489414 UTP20O75691 2785 aaKnown RBP9□□□□□ -0.97
EXOSC3-206ENST00000489414 CDX4O14627 284 aaPredicted RBP9□□□□□ -0.97
EXOSC3-206ENST00000489414 ZNF286BP0CG31 522 aa9□□□□□ -0.97
EXOSC3-206ENST00000489414 GHRP10912 638 aa9□□□□□ -0.97
EXOSC3-206ENST00000489414 AKR1B1P15121 316 aa9□□□□□ -0.97
EXOSC3-206ENST00000489414 RDXP35241 583 aaKnown RBP9□□□□□ -0.97
EXOSC3-206ENST00000489414 SATB1Q01826 763 aa9□□□□□ -0.97
EXOSC3-206ENST00000489414 ARHGAP1Q07960 439 aa9□□□□□ -0.97
EXOSC3-206ENST00000489414 ZNF687Q8N1G0 1237 aa9□□□□□ -0.97
EXOSC3-206ENST00000489414 SLC22A17Q8WUG5 538 aa9□□□□□ -0.97
EXOSC3-206ENST00000489414 SPOCK2Q92563 424 aa9□□□□□ -0.97
EXOSC3-206ENST00000489414 STAMQ92783 540 aa9□□□□□ -0.97
EXOSC3-206ENST00000489414 ATP6V0A1Q93050 837 aa9□□□□□ -0.97
EXOSC3-206ENST00000489414 KIFC2Q96AC6 838 aa9□□□□□ -0.97
EXOSC3-206ENST00000489414 PRKRIP1Q9H875 184 aaPredicted RBP9□□□□□ -0.97
EXOSC3-206ENST00000489414 WDR6Q9NNW5 1121 aaKnown RBP9□□□□□ -0.97
EXOSC3-206ENST00000489414 PRR12Q9ULL5 1215 aa9□□□□□ -0.97
EXOSC3-206ENST00000489414 TEX51A0A1B0GUA7 166 aa8.99□□□□□ -0.97
EXOSC3-206ENST00000489414 CIAO1O76071 339 aa8.99□□□□□ -0.97
EXOSC3-206ENST00000489414 STAG3L1P0CL83 205 aa8.99□□□□□ -0.97
EXOSC3-206ENST00000489414 LAMP2P13473 410 aa8.99□□□□□ -0.97
EXOSC3-206ENST00000489414 LPIN1Q14693 890 aa8.99□□□□□ -0.97
EXOSC3-206ENST00000489414 GLG1Q92896 1179 aa8.99□□□□□ -0.97
EXOSC3-206ENST00000489414 FCRL3Q96P31 734 aaPredicted RBP8.99□□□□□ -0.97
EXOSC3-206ENST00000489414 RPP25Q9BUL9 199 aaKnown RBP8.99□□□□□ -0.97
EXOSC3-206ENST00000489414 SLC32A1Q9H598 525 aa8.99□□□□□ -0.97
EXOSC3-206ENST00000489414 TMEM9BQ9NQ34 198 aa8.99□□□□□ -0.97
EXOSC3-206ENST00000489414 HSPBP1Q9NZL4 362 aa8.99□□□□□ -0.97
EXOSC3-206ENST00000489414 ADD3Q9UEY8 706 aaKnown RBP8.99□□□□□ -0.97
EXOSC3-206ENST00000489414 SPTBN1Q01082 2364 aaKnown RBP8.98□□□□□ -0.97
EXOSC3-206ENST00000489414 K7ESF4 209 aa8.98□□□□□ -0.97
EXOSC3-206ENST00000489414 CHRNA1P02708 482 aa8.98□□□□□ -0.97
EXOSC3-206ENST00000489414 CYP2E1P05181 493 aaPredicted RBP8.98□□□□□ -0.97
EXOSC3-206ENST00000489414 CXCL12P48061 93 aa8.98□□□□□ -0.97
EXOSC3-206ENST00000489414 TIMM10P62072 90 aa8.98□□□□□ -0.97
EXOSC3-206ENST00000489414 ATP8B2P98198 1209 aa8.98□□□□□ -0.97
EXOSC3-206ENST00000489414 MVPQ14764 893 aaKnown RBP8.98□□□□□ -0.97
EXOSC3-206ENST00000489414 WTAPQ15007 396 aa8.98□□□□□ -0.97
EXOSC3-206ENST00000489414 ZNF423Q2M1K9 1284 aa8.98□□□□□ -0.97
EXOSC3-206ENST00000489414 TKFCQ3LXA3 575 aa8.98□□□□□ -0.97
EXOSC3-206ENST00000489414 CCDC62Q6P9F0 684 aa8.98□□□□□ -0.97
EXOSC3-206ENST00000489414 TPRG1Q6ZUI0 275 aa8.98□□□□□ -0.97
EXOSC3-206ENST00000489414 RTN4RL1Q86UN2 441 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms