RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 ATP8B4Q8TF62 1192 aa14.11□□□□□ -0.15
CPSF3-204ENST00000489403 TMEM40Q8WWA1 233 aa14.11□□□□□ -0.15
CPSF3-204ENST00000489403 CRYGNQ8WXF5 182 aa14.11□□□□□ -0.15
CPSF3-204ENST00000489403 EVPLQ92817 2033 aa14.11□□□□□ -0.15
CPSF3-204ENST00000489403 IGFLR1Q9H665 355 aa14.11□□□□□ -0.15
CPSF3-204ENST00000489403 CDHR5Q9HBB8 845 aa14.11□□□□□ -0.15
CPSF3-204ENST00000489403 ERVK-5Q9HDB9 667 aa14.11□□□□□ -0.15
CPSF3-204ENST00000489403 COL1A2P08123 1366 aa14.1□□□□□ -0.15
CPSF3-204ENST00000489403 ZBTB42B2RXF5 422 aa14.1□□□□□ -0.15
CPSF3-204ENST00000489403 ADAMTS3O15072 1205 aa14.1□□□□□ -0.15
CPSF3-204ENST00000489403 DCXO43602 365 aa14.1□□□□□ -0.15
CPSF3-204ENST00000489403 ATP4AP20648 1035 aa14.1□□□□□ -0.15
CPSF3-204ENST00000489403 ADD1P35611 737 aaKnown RBP14.1□□□□□ -0.15
CPSF3-204ENST00000489403 SARSP49591 514 aaKnown RBP14.1□□□□□ -0.15
CPSF3-204ENST00000489403 NFX1Q12986 1120 aaKnown RBP14.1□□□□□ -0.15
CPSF3-204ENST00000489403 KRT32Q14532 448 aa14.1□□□□□ -0.15
CPSF3-204ENST00000489403 SMAD2Q15796 467 aaKnown RBP14.1□□□□□ -0.15
CPSF3-204ENST00000489403 PFKFB3Q16875 520 aaPredicted RBP14.1□□□□□ -0.15
CPSF3-204ENST00000489403 FAM160B1Q5W0V3 765 aa14.1□□□□□ -0.15
CPSF3-204ENST00000489403 PDXDC2PQ6P474 469 aa14.1□□□□□ -0.15
CPSF3-204ENST00000489403 ADGRD2Q7Z7M1 963 aa14.1□□□□□ -0.15
CPSF3-204ENST00000489403 KIAA0319LQ8IZA0 1049 aa14.1□□□□□ -0.15
CPSF3-204ENST00000489403 POF1BQ8WVV4 589 aa14.1□□□□□ -0.15
CPSF3-204ENST00000489403 UIMC1Q96RL1 719 aa14.1□□□□□ -0.15
CPSF3-204ENST00000489403 ZNF302Q9NR11 478 aa14.1□□□□□ -0.15
CPSF3-204ENST00000489403 GINS2Q9Y248 185 aa14.1□□□□□ -0.15
CPSF3-204ENST00000489403 NOC2LQ9Y3T9 749 aaKnown RBP14.1□□□□□ -0.15
CPSF3-204ENST00000489403 ESYT2A0FGR8 921 aa14.09□□□□□ -0.15
CPSF3-204ENST00000489403 IPO5O00410 1097 aaKnown RBP14.09□□□□□ -0.15
CPSF3-204ENST00000489403 RPS6KA5O75582 802 aa14.09□□□□□ -0.15
CPSF3-204ENST00000489403 CYP3A4P08684 503 aa14.09□□□□□ -0.15
CPSF3-204ENST00000489403 CPA1P15085 419 aa14.09□□□□□ -0.15
CPSF3-204ENST00000489403 IBSPP21815 317 aaPredicted RBP14.09□□□□□ -0.15
CPSF3-204ENST00000489403 METAP2P50579 478 aaKnown RBP eCLIP14.09□□□□□ -0.15
CPSF3-204ENST00000489403 ADAM15Q13444 863 aa14.09□□□□□ -0.15
CPSF3-204ENST00000489403 SMAD4Q13485 552 aaKnown RBP14.09□□□□□ -0.15
CPSF3-204ENST00000489403 ZNF484Q5JVG2 852 aa14.09□□□□□ -0.15
CPSF3-204ENST00000489403 SWSAP1Q6NVH7 229 aa14.09□□□□□ -0.15
CPSF3-204ENST00000489403 MIS18BP1Q6P0N0 1132 aa14.09□□□□□ -0.15
CPSF3-204ENST00000489403 MSLNLQ96KJ4 702 aa14.09□□□□□ -0.15
CPSF3-204ENST00000489403 ZMYND12Q9H0C1 365 aa14.09□□□□□ -0.15
CPSF3-204ENST00000489403 CD207Q9UJ71 328 aa14.09□□□□□ -0.15
CPSF3-204ENST00000489403 LRFN2Q9ULH4 789 aa14.09□□□□□ -0.15
CPSF3-204ENST00000489403 NAP1L2Q9ULW6 460 aaPredicted RBP14.09□□□□□ -0.15
CPSF3-204ENST00000489403 MYH9P35579 1960 aaKnown RBP14.09□□□□□ -0.15
CPSF3-204ENST00000489403 NID2Q14112 1375 aa14.09□□□□□ -0.15
CPSF3-204ENST00000489403 WDR81Q562E7 1941 aa14.08□□□□□ -0.16
CPSF3-204ENST00000489403 CDC45O75419 566 aa14.08□□□□□ -0.16
CPSF3-204ENST00000489403 C22orf31O95567 290 aa14.08□□□□□ -0.16
CPSF3-204ENST00000489403 HMGB1P09429 215 aaKnown RBP14.08□□□□□ -0.16
CPSF3-204ENST00000489403 NDUFV1P49821 464 aa14.08□□□□□ -0.16
CPSF3-204ENST00000489403 SETQ01105 290 aaPredicted RBP14.08□□□□□ -0.16
CPSF3-204ENST00000489403 APOBRQ0VD83 1088 aa14.08□□□□□ -0.16
CPSF3-204ENST00000489403 PKN1Q16512 942 aa14.08□□□□□ -0.16
CPSF3-204ENST00000489403 CENPQQ7L2Z9 268 aaPredicted RBP14.08□□□□□ -0.16
CPSF3-204ENST00000489403 PPP2R3CQ969Q6 453 aa14.08□□□□□ -0.16
CPSF3-204ENST00000489403 PPP1R16BQ96T49 567 aa14.08□□□□□ -0.16
CPSF3-204ENST00000489403 POP1Q99575 1024 aaKnown RBP14.08□□□□□ -0.16
CPSF3-204ENST00000489403 OSMRQ99650 979 aa14.08□□□□□ -0.16
CPSF3-204ENST00000489403 ZNF577Q9BSK1 485 aa14.08□□□□□ -0.16
CPSF3-204ENST00000489403 RGS18Q9NS28 235 aa14.08□□□□□ -0.16
CPSF3-204ENST00000489403 ST3GAL5Q9UNP4 418 aa14.08□□□□□ -0.16
CPSF3-204ENST00000489403 PCDHB7Q9Y5E2 793 aa14.08□□□□□ -0.16
CPSF3-204ENST00000489403 PCDHGC5Q9Y5F6 944 aa14.08□□□□□ -0.16
CPSF3-204ENST00000489403 MAFBQ9Y5Q3 323 aaPredicted RBP14.08□□□□□ -0.16
CPSF3-204ENST00000489403 CCDC196A0A1B0GTZ2 297 aa14.07□□□□□ -0.16
CPSF3-204ENST00000489403 DENND3A2RUS2 1198 aa14.07□□□□□ -0.16
CPSF3-204ENST00000489403 C9IYK1 514 aa14.07□□□□□ -0.16
CPSF3-204ENST00000489403 GLP2RO95838 553 aa14.07□□□□□ -0.16
CPSF3-204ENST00000489403 CSPP1Q1MSJ5 1256 aa14.07□□□□□ -0.16
CPSF3-204ENST00000489403 KIZQ2M2Z5 673 aa14.07□□□□□ -0.16
CPSF3-204ENST00000489403 ODR4Q5SWX8 454 aa14.07□□□□□ -0.16
CPSF3-204ENST00000489403 ZNF746Q6NUN9 644 aaPredicted RBP14.07□□□□□ -0.16
CPSF3-204ENST00000489403 Q6ZUG5 572 aa14.07□□□□□ -0.16
CPSF3-204ENST00000489403 FAM228AQ86W67 206 aa14.07□□□□□ -0.16
CPSF3-204ENST00000489403 CKAP2LQ8IYA6 745 aa14.07□□□□□ -0.16
CPSF3-204ENST00000489403 EFHBQ8N7U6 833 aa14.07□□□□□ -0.16
CPSF3-204ENST00000489403 BBXQ8WY36 941 aaPredicted RBP14.07□□□□□ -0.16
CPSF3-204ENST00000489403 KCNB2Q92953 911 aa14.07□□□□□ -0.16
CPSF3-204ENST00000489403 BRF1Q92994 677 aa14.07□□□□□ -0.16
CPSF3-204ENST00000489403 ADAM2Q99965 735 aa14.07□□□□□ -0.16
CPSF3-204ENST00000489403 C1orf112Q9NSG2 853 aa14.07□□□□□ -0.16
CPSF3-204ENST00000489403 TBC1D22BQ9NU19 505 aa14.07□□□□□ -0.16
CPSF3-204ENST00000489403 FOXD4L1Q9NU39 408 aa14.07□□□□□ -0.16
CPSF3-204ENST00000489403 CLEC1BQ9P126 229 aa14.07□□□□□ -0.16
CPSF3-204ENST00000489403 HCSTQ9UBK5 93 aa14.07□□□□□ -0.16
CPSF3-204ENST00000489403 TBKBP1A7MCY6 615 aa14.06□□□□□ -0.16
CPSF3-204ENST00000489403 GPR182O15218 404 aa14.06□□□□□ -0.16
CPSF3-204ENST00000489403 GPR32O75388 356 aa14.06□□□□□ -0.16
CPSF3-204ENST00000489403 EYA4O95677 639 aa14.06□□□□□ -0.16
CPSF3-204ENST00000489403 VTNP04004 478 aa14.06□□□□□ -0.16
CPSF3-204ENST00000489403 NRIP1P48552 1158 aa14.06□□□□□ -0.16
CPSF3-204ENST00000489403 CRYBB1P53674 252 aaPredicted RBP14.06□□□□□ -0.16
CPSF3-204ENST00000489403 FGD1P98174 961 aa14.06□□□□□ -0.16
CPSF3-204ENST00000489403 SPOUT1Q5T280 376 aaKnown RBP14.06□□□□□ -0.16
CPSF3-204ENST00000489403 FAM102BQ5T8I3 360 aa14.06□□□□□ -0.16
CPSF3-204ENST00000489403 MCTP2Q6DN12 878 aa14.06□□□□□ -0.16
CPSF3-204ENST00000489403 FAM43BQ6ZT52 329 aaPredicted RBP14.06□□□□□ -0.16
CPSF3-204ENST00000489403 SLC24A5Q71RS6 500 aa14.06□□□□□ -0.16
CPSF3-204ENST00000489403 TRMT1LQ7Z2T5 733 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms