RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 MAFAQ8NHW3 353 aaPredicted RBP13.92□□□□□ -0.18
COL4A5-206ENST00000489230 TRIM43Q96BQ3 446 aaPredicted RBP13.92□□□□□ -0.18
COL4A5-206ENST00000489230 CDX2Q99626 313 aaPredicted RBP13.92□□□□□ -0.18
COL4A5-206ENST00000489230 LXNQ9BS40 222 aa13.92□□□□□ -0.18
COL4A5-206ENST00000489230 RGL1Q9NZL6 768 aa13.92□□□□□ -0.18
COL4A5-206ENST00000489230 TUBE1Q9UJT0 475 aa13.92□□□□□ -0.18
COL4A5-206ENST00000489230 SRPRBQ9Y5M8 271 aaKnown RBP13.92□□□□□ -0.18
COL4A5-206ENST00000489230 CLIC4Q9Y696 253 aa13.92□□□□□ -0.18
COL4A5-206ENST00000489230 SMIM35A0A1B0GVV1 85 aa13.91□□□□□ -0.18
COL4A5-206ENST00000489230 VWA3AA6NCI4 1184 aa13.91□□□□□ -0.18
COL4A5-206ENST00000489230 YEATS4O95619 227 aa13.91□□□□□ -0.18
COL4A5-206ENST00000489230 CYP2C9P11712 490 aa13.91□□□□□ -0.18
COL4A5-206ENST00000489230 YWHABP31946 246 aaKnown RBP13.91□□□□□ -0.18
COL4A5-206ENST00000489230 CCT6AP40227 531 aaKnown RBP13.91□□□□□ -0.18
COL4A5-206ENST00000489230 UBA7P41226 1012 aa13.91□□□□□ -0.18
COL4A5-206ENST00000489230 NASPP49321 788 aaPredicted RBP13.91□□□□□ -0.18
COL4A5-206ENST00000489230 IGBP1P78318 339 aa13.91□□□□□ -0.18
COL4A5-206ENST00000489230 ZNF200P98182 395 aaPredicted RBP13.91□□□□□ -0.18
COL4A5-206ENST00000489230 RBL2Q08999 1139 aa13.91□□□□□ -0.18
COL4A5-206ENST00000489230 CTTNQ14247 550 aaKnown RBP13.91□□□□□ -0.18
COL4A5-206ENST00000489230 STK38Q15208 465 aa13.91□□□□□ -0.18
COL4A5-206ENST00000489230 MARCH8Q5T0T0 291 aa13.91□□□□□ -0.18
COL4A5-206ENST00000489230 FOXD4L5Q5VV16 416 aaPredicted RBP13.91□□□□□ -0.18
COL4A5-206ENST00000489230 IER5Q5VY09 327 aa13.91□□□□□ -0.18
COL4A5-206ENST00000489230 TRMT1LQ7Z2T5 733 aaKnown RBP13.91□□□□□ -0.18
COL4A5-206ENST00000489230 SH3RF1Q7Z6J0 888 aa13.91□□□□□ -0.18
COL4A5-206ENST00000489230 CATSPER3Q86XQ3 398 aa13.91□□□□□ -0.18
COL4A5-206ENST00000489230 FOXD4L4Q8WXT5 416 aaPredicted RBP13.91□□□□□ -0.18
COL4A5-206ENST00000489230 CCDC43Q96MW1 224 aaKnown RBP13.91□□□□□ -0.18
COL4A5-206ENST00000489230 NOC4LQ9BVI4 516 aaKnown RBP13.91□□□□□ -0.18
COL4A5-206ENST00000489230 NT5C3AQ9H0P0 336 aa13.91□□□□□ -0.18
COL4A5-206ENST00000489230 SEMA6BQ9H3T3 888 aa13.91□□□□□ -0.18
COL4A5-206ENST00000489230 SEPT9Q9UHD8 586 aaPredicted RBP13.91□□□□□ -0.18
COL4A5-206ENST00000489230 CIZ1Q9ULV3 898 aaPredicted RBP13.91□□□□□ -0.18
COL4A5-206ENST00000489230 VCANP13611 3396 aa13.91□□□□□ -0.18
COL4A5-206ENST00000489230 POTEMA6NI47 508 aa13.9□□□□□ -0.18
COL4A5-206ENST00000489230 PPP6R2O75170 966 aa13.9□□□□□ -0.18
COL4A5-206ENST00000489230 STBD1O95210 358 aa13.9□□□□□ -0.18
COL4A5-206ENST00000489230 SPATA31C1P0DKV0 1188 aa13.9□□□□□ -0.18
COL4A5-206ENST00000489230 SELPP16109 830 aa13.9□□□□□ -0.18
COL4A5-206ENST00000489230 THPOP40225 353 aa13.9□□□□□ -0.18
COL4A5-206ENST00000489230 RFC5P40937 340 aa13.9□□□□□ -0.18
COL4A5-206ENST00000489230 CYP4A11Q02928 519 aa13.9□□□□□ -0.18
COL4A5-206ENST00000489230 CEBPZQ03701 1054 aaKnown RBP13.9□□□□□ -0.18
COL4A5-206ENST00000489230 TBC1D8BQ0IIM8 1120 aa13.9□□□□□ -0.18
COL4A5-206ENST00000489230 PPIGQ13427 754 aaKnown RBP eCLIP13.9□□□□□ -0.182e-6■■■□□ 14.6
COL4A5-206ENST00000489230 PTPAQ15257 358 aa13.9□□□□□ -0.18
COL4A5-206ENST00000489230 TARBP2Q15633 366 aaKnown RBP13.9□□□□□ -0.18
COL4A5-206ENST00000489230 IL17AQ16552 155 aa13.9□□□□□ -0.18
COL4A5-206ENST00000489230 UGCGQ16739 394 aa13.9□□□□□ -0.18
COL4A5-206ENST00000489230 C9orf50Q5SZB4 431 aa13.9□□□□□ -0.18
COL4A5-206ENST00000489230 FAM173BQ6P4H8 233 aa13.9□□□□□ -0.18
COL4A5-206ENST00000489230 ANO5Q75V66 913 aa13.9□□□□□ -0.18
COL4A5-206ENST00000489230 KRI1Q8N9T8 703 aaKnown RBP13.9□□□□□ -0.18
COL4A5-206ENST00000489230 LINC00301Q8NCQ3 95 aa13.9□□□□□ -0.18
COL4A5-206ENST00000489230 KCNG4Q8TDN1 519 aa13.9□□□□□ -0.18
COL4A5-206ENST00000489230 SLC7A3Q8WY07 619 aa13.9□□□□□ -0.18
COL4A5-206ENST00000489230 BADQ92934 168 aa13.9□□□□□ -0.18
COL4A5-206ENST00000489230 CEP170P1Q96L14 293 aa13.9□□□□□ -0.18
COL4A5-206ENST00000489230 USP28Q96RU2 1077 aa13.9□□□□□ -0.18
COL4A5-206ENST00000489230 CYP26B1Q9NR63 512 aa13.9□□□□□ -0.18
COL4A5-206ENST00000489230 TFIP11Q9UBB9 837 aaKnown RBP13.9□□□□□ -0.18
COL4A5-206ENST00000489230 DBR1Q9UK59 544 aaKnown RBP13.9□□□□□ -0.18
COL4A5-206ENST00000489230 DNM3Q9UQ16 869 aa13.9□□□□□ -0.18
COL4A5-206ENST00000489230 LTBP2Q14767 1821 aa13.9□□□□□ -0.18
COL4A5-206ENST00000489230 DOCK5Q9H7D0 1870 aa13.89□□□□□ -0.19
COL4A5-206ENST00000489230 RSPH10B2B2RC85 870 aa13.89□□□□□ -0.19
COL4A5-206ENST00000489230 ZBTB42B2RXF5 422 aa13.89□□□□□ -0.19
COL4A5-206ENST00000489230 M0QZ92 97 aa13.89□□□□□ -0.19
COL4A5-206ENST00000489230 SPTLC2O15270 562 aa13.89□□□□□ -0.19
COL4A5-206ENST00000489230 GAS2O43903 313 aaKnown RBP13.89□□□□□ -0.19
COL4A5-206ENST00000489230 IQCF3P0C7M6 154 aa13.89□□□□□ -0.19
COL4A5-206ENST00000489230 RSPH10BP0C881 870 aa13.89□□□□□ -0.19
COL4A5-206ENST00000489230 CKBP12277 381 aa13.89□□□□□ -0.19
COL4A5-206ENST00000489230 FOSL2P15408 326 aa13.89□□□□□ -0.19
COL4A5-206ENST00000489230 TXLNAP40222 546 aa13.89□□□□□ -0.19
COL4A5-206ENST00000489230 SMAD3P84022 425 aaKnown RBP13.89□□□□□ -0.19
COL4A5-206ENST00000489230 FPGSQ05932 587 aa13.89□□□□□ -0.19
COL4A5-206ENST00000489230 PKP1Q13835 747 aa13.89□□□□□ -0.19
COL4A5-206ENST00000489230 XKR9Q5GH70 373 aa13.89□□□□□ -0.19
COL4A5-206ENST00000489230 EFCAB12Q6NXP0 572 aa13.89□□□□□ -0.19
COL4A5-206ENST00000489230 METTL13Q8N6R0 699 aa13.89□□□□□ -0.19
COL4A5-206ENST00000489230 SNX29Q8TEQ0 813 aa13.89□□□□□ -0.19
COL4A5-206ENST00000489230 PPP1R13LQ8WUF5 828 aa13.89□□□□□ -0.19
COL4A5-206ENST00000489230 MYLIPQ8WY64 445 aa13.89□□□□□ -0.19
COL4A5-206ENST00000489230 CALML4Q96GE6 196 aa13.89□□□□□ -0.19
COL4A5-206ENST00000489230 CDK5RAP3Q96JB5 506 aa13.89□□□□□ -0.19
COL4A5-206ENST00000489230 SCAND2PQ9GZW5 306 aaPredicted RBP13.89□□□□□ -0.19
COL4A5-206ENST00000489230 KIAA1024Q9UPX6 916 aa13.89□□□□□ -0.19
COL4A5-206ENST00000489230 RBM19Q9Y4C8 960 aaKnown RBP13.89□□□□□ -0.19
COL4A5-206ENST00000489230 KDM3AQ9Y4C1 1321 aa13.89□□□□□ -0.19
COL4A5-206ENST00000489230 LAMA2P24043 3122 aaKnown RBP13.88□□□□□ -0.19
COL4A5-206ENST00000489230 MAFO75444 373 aaPredicted RBP13.88□□□□□ -0.19
COL4A5-206ENST00000489230 MED24O75448 989 aa13.88□□□□□ -0.19
COL4A5-206ENST00000489230 DGAT1O75907 488 aa13.88□□□□□ -0.19
COL4A5-206ENST00000489230 PFKMP08237 780 aa13.88□□□□□ -0.19
COL4A5-206ENST00000489230 MARCKSP29966 332 aaPredicted RBP13.88□□□□□ -0.19
COL4A5-206ENST00000489230 CYP2C18P33260 490 aa13.88□□□□□ -0.19
COL4A5-206ENST00000489230 KRT85P78386 507 aa13.88□□□□□ -0.19
COL4A5-206ENST00000489230 HIC1Q14526 733 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms