RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 TBC1D8O95759 1140 aa11.09□□□□□ -0.63
USP11-211ENST00000489111 RSPH10BP0C881 870 aa11.09□□□□□ -0.63
USP11-211ENST00000489111 CCNE1P24864 410 aa11.09□□□□□ -0.63
USP11-211ENST00000489111 NPEPPSP55786 919 aa11.09□□□□□ -0.63
USP11-211ENST00000489111 SP3Q02447 781 aa11.09□□□□□ -0.63
USP11-211ENST00000489111 HSDL1Q3SXM5 330 aa11.09□□□□□ -0.63
USP11-211ENST00000489111 DUSP28Q4G0W2 176 aa11.09□□□□□ -0.63
USP11-211ENST00000489111 ODR4Q5SWX8 454 aa11.09□□□□□ -0.63
USP11-211ENST00000489111 FAM102BQ5T8I3 360 aa11.09□□□□□ -0.63
USP11-211ENST00000489111 IQSEC1Q6DN90 963 aa11.09□□□□□ -0.63
USP11-211ENST00000489111 SARM1Q6SZW1 724 aa11.09□□□□□ -0.63
USP11-211ENST00000489111 ANO5Q75V66 913 aa11.09□□□□□ -0.63
USP11-211ENST00000489111 MCPH1Q8NEM0 835 aa11.09□□□□□ -0.63
USP11-211ENST00000489111 ANKRD20A12PQ8NF67 263 aa11.09□□□□□ -0.63
USP11-211ENST00000489111 PPTC7Q8NI37 304 aa11.09□□□□□ -0.63
USP11-211ENST00000489111 AFAP1L1Q8TED9 768 aa11.09□□□□□ -0.63
USP11-211ENST00000489111 NOC3LQ8WTT2 800 aaKnown RBP11.09□□□□□ -0.63
USP11-211ENST00000489111 P2RX5Q93086 422 aa11.09□□□□□ -0.63
USP11-211ENST00000489111 EMID1Q96A84 441 aaPredicted RBP11.09□□□□□ -0.63
USP11-211ENST00000489111 ARHGAP39Q9C0H5 1083 aa11.09□□□□□ -0.63
USP11-211ENST00000489111 MRPL44Q9H9J2 332 aaKnown RBP11.09□□□□□ -0.63
USP11-211ENST00000489111 ATP6V0A4Q9HBG4 840 aa11.09□□□□□ -0.63
USP11-211ENST00000489111 CYP26B1Q9NR63 512 aa11.09□□□□□ -0.63
USP11-211ENST00000489111 OLFML3Q9NRN5 406 aa11.09□□□□□ -0.63
USP11-211ENST00000489111 NRBP2Q9NSY0 501 aa11.09□□□□□ -0.63
USP11-211ENST00000489111 FANCLQ9NW38 375 aa11.09□□□□□ -0.63
USP11-211ENST00000489111 PLXNB2O15031 1838 aa11.08□□□□□ -0.64
USP11-211ENST00000489111 CBFA2T2O43439 604 aa11.08□□□□□ -0.64
USP11-211ENST00000489111 LGR5O75473 907 aa11.08□□□□□ -0.64
USP11-211ENST00000489111 TRPA1O75762 1119 aa11.08□□□□□ -0.64
USP11-211ENST00000489111 DGAT1O75907 488 aa11.08□□□□□ -0.64
USP11-211ENST00000489111 GCNT3O95395 438 aa11.08□□□□□ -0.64
USP11-211ENST00000489111 SERPINC1P01008 464 aa11.08□□□□□ -0.64
USP11-211ENST00000489111 TPM3P06753 285 aa11.08□□□□□ -0.64
USP11-211ENST00000489111 SMPD1P17405 629 aa11.08□□□□□ -0.64
USP11-211ENST00000489111 CDK11BP21127 795 aaKnown RBP11.08□□□□□ -0.64
USP11-211ENST00000489111 CYP2C19P33261 490 aa11.08□□□□□ -0.64
USP11-211ENST00000489111 SLC26A2P50443 739 aa11.08□□□□□ -0.64
USP11-211ENST00000489111 ZNF131P52739 623 aa11.08□□□□□ -0.64
USP11-211ENST00000489111 POLGP54098 1239 aaPredicted RBP11.08□□□□□ -0.64
USP11-211ENST00000489111 TNFAIP2Q03169 654 aa11.08□□□□□ -0.64
USP11-211ENST00000489111 LRRC63Q05C16 580 aa11.08□□□□□ -0.64
USP11-211ENST00000489111 LRRC41Q15345 812 aa11.08□□□□□ -0.64
USP11-211ENST00000489111 CCL14Q16627 93 aa11.08□□□□□ -0.64
USP11-211ENST00000489111 CCDC144BQ3MJ40 725 aa11.08□□□□□ -0.64
USP11-211ENST00000489111 MTERF2Q49AM1 385 aa11.08□□□□□ -0.64
USP11-211ENST00000489111 GJC2Q5T442 439 aaPredicted RBP11.08□□□□□ -0.64
USP11-211ENST00000489111 MFSD14CQ5VZR4 134 aa11.08□□□□□ -0.64
USP11-211ENST00000489111 MAEAQ7L5Y9 396 aa11.08□□□□□ -0.64
USP11-211ENST00000489111 PLPPR4Q7Z2D5 763 aa11.08□□□□□ -0.64
USP11-211ENST00000489111 FAM178BQ8IXR5 827 aa11.08□□□□□ -0.64
USP11-211ENST00000489111 OR6J1Q8NGC5 347 aa11.08□□□□□ -0.64
USP11-211ENST00000489111 SLC7A3Q8WY07 619 aa11.08□□□□□ -0.64
USP11-211ENST00000489111 KIFAP3Q92845 792 aa11.08□□□□□ -0.64
USP11-211ENST00000489111 PCYT2Q99447 389 aa11.08□□□□□ -0.64
USP11-211ENST00000489111 SH2D3AQ9BRG2 576 aa11.08□□□□□ -0.64
USP11-211ENST00000489111 CFHR5Q9BXR6 569 aa11.08□□□□□ -0.64
USP11-211ENST00000489111 SMARCAD1Q9H4L7 1026 aa11.08□□□□□ -0.64
USP11-211ENST00000489111 RNF186Q9NXI6 227 aa11.08□□□□□ -0.64
USP11-211ENST00000489111 FLRT1Q9NZU1 646 aa11.08□□□□□ -0.64
USP11-211ENST00000489111 LARSQ9P2J5 1176 aaKnown RBP11.08□□□□□ -0.64
USP11-211ENST00000489111 GJD2Q9UKL4 321 aa11.08□□□□□ -0.64
USP11-211ENST00000489111 TRPC6Q9Y210 931 aa11.08□□□□□ -0.64
USP11-211ENST00000489111 PPME1Q9Y570 386 aa11.08□□□□□ -0.64
USP11-211ENST00000489111 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.07□□□□□ -0.64
USP11-211ENST00000489111 TRIM49BA6NDI0 452 aa11.07□□□□□ -0.64
USP11-211ENST00000489111 SFI1A8K8P3 1242 aa11.07□□□□□ -0.64
USP11-211ENST00000489111 K7ENM7 598 aa11.07□□□□□ -0.64
USP11-211ENST00000489111 STBD1O95210 358 aa11.07□□□□□ -0.64
USP11-211ENST00000489111 FGFR1OPO95684 399 aaKnown RBP11.07□□□□□ -0.64
USP11-211ENST00000489111 XRCC5P13010 732 aaKnown RBP11.07□□□□□ -0.64
USP11-211ENST00000489111 PLS3P13797 630 aa11.07□□□□□ -0.64
USP11-211ENST00000489111 MARK3P27448 753 aa11.07□□□□□ -0.64
USP11-211ENST00000489111 HOXD10P28358 340 aa11.07□□□□□ -0.64
USP11-211ENST00000489111 CTGFP29279 349 aa11.07□□□□□ -0.64
USP11-211ENST00000489111 RFC5P40937 340 aa11.07□□□□□ -0.64
USP11-211ENST00000489111 ZNF75DP51815 510 aa11.07□□□□□ -0.64
USP11-211ENST00000489111 PRKCZQ05513 592 aa11.07□□□□□ -0.64
USP11-211ENST00000489111 SPAG1Q07617 926 aa11.07□□□□□ -0.64
USP11-211ENST00000489111 MAPK7Q13164 816 aa11.07□□□□□ -0.64
USP11-211ENST00000489111 DMP1Q13316 513 aaPredicted RBP11.07□□□□□ -0.64
USP11-211ENST00000489111 EMC2Q15006 297 aa11.07□□□□□ -0.64
USP11-211ENST00000489111 HSP90AA4PQ58FG1 418 aa11.07□□□□□ -0.64
USP11-211ENST00000489111 TRIM50Q86XT4 487 aa11.07□□□□□ -0.64
USP11-211ENST00000489111 FAM114A1Q8IWE2 563 aa11.07□□□□□ -0.64
USP11-211ENST00000489111 NELFCDQ8IXH7 590 aa11.07□□□□□ -0.64
USP11-211ENST00000489111 CSGALNACT2Q8N6G5 542 aa11.07□□□□□ -0.64
USP11-211ENST00000489111 SLC17A8Q8NDX2 589 aa11.07□□□□□ -0.64
USP11-211ENST00000489111 ATP8B4Q8TF62 1192 aa11.07□□□□□ -0.64
USP11-211ENST00000489111 AFG1LQ8WV93 481 aa11.07□□□□□ -0.64
USP11-211ENST00000489111 BBXQ8WY36 941 aaPredicted RBP11.07□□□□□ -0.64
USP11-211ENST00000489111 MAGEC2Q9UBF1 373 aaPredicted RBP11.07□□□□□ -0.64
USP11-211ENST00000489111 NRBP1Q9UHY1 535 aa11.07□□□□□ -0.64
USP11-211ENST00000489111 ZNF215Q9UL58 517 aaPredicted RBP11.07□□□□□ -0.64
USP11-211ENST00000489111 PCDHA2Q9Y5H9 948 aa11.07□□□□□ -0.64
USP11-211ENST00000489111 UBE4BO95155 1302 aa11.07□□□□□ -0.64
USP11-211ENST00000489111 EIF3DO15371 548 aaKnown RBP eCLIP11.06□□□□□ -0.64
USP11-211ENST00000489111 LGALS2P05162 132 aa11.06□□□□□ -0.64
USP11-211ENST00000489111 PTMAP06454 111 aaKnown RBP11.06□□□□□ -0.64
USP11-211ENST00000489111 MYBP10242 640 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms